Conservation of cofitness between JDDGAC_28300 and JDDGAC_06150 in Escherichia coli ECRC98

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_28300 mdtC multidrug efflux RND transporter permease subunit MdtC 1.0 JDDGAC_06150 dauA C4-dicarboxylic acid transporter DauA 0.56 17
Escherichia coli ECRC99 1.00 KEDOAH_03960 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 KEDOAH_25420 dauA C4-dicarboxylic acid transporter DauA — —
Escherichia coli ECRC102 1.00 NIAGMN_22135 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 NIAGMN_27810 dauA C4-dicarboxylic acid transporter DauA — —
Escherichia coli ECRC101 1.00 MCAODC_20750 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 MCAODC_21835 dauA C4-dicarboxylic acid transporter DauA low > 87
Escherichia coli ECRC100 1.00 OKFHMN_24190 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 OKFHMN_28425 dauA C4-dicarboxylic acid transporter DauA low > 80
Escherichia coli ECOR27 1.00 NOLOHH_15535 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 NOLOHH_20635 dauA C4-dicarboxylic acid transporter DauA low > 75
Escherichia coli BL21 1.00 ECD_01981 multidrug efflux system, subunit C 1.00 ECD_01181 C4-dicarboxylic acid transporter low > 61
Escherichia coli ECRC62 1.00 BNILDI_14450 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 BNILDI_18790 dauA C4-dicarboxylic acid transporter DauA low > 75
Escherichia coli BW25113 0.99 b2076 mdtC multidrug efflux system, subunit C (NCBI) 1.00 b1206 ychM orf, hypothetical protein (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01628 Multidrug resistance protein MdtC 1.00 OHPLBJKB_02481 C4-dicarboxylic acid transporter DauA low > 73
Escherichia coli ECOR38 0.99 HEPCGN_02880 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 HEPCGN_24890 dauA C4-dicarboxylic acid transporter DauA low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS12205 multidrug efflux RND transporter permease subunit MdtC 1.00 ECOLIN_RS07295 C4-dicarboxylic acid transporter DauA — —
Escherichia fergusonii Becca 0.99 EFB2_01779 Multidrug resistance protein MdtC 1.00 EFB2_02721 C4-dicarboxylic acid transporter DauA low > 86
Enterobacter asburiae PDN3 0.92 EX28DRAFT_0482 Cation/multidrug efflux pump 0.89 EX28DRAFT_0825 high affinity sulphate transporter 1 low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_03062 Multidrug resistance protein MdtC 0.89 MPMX20_02641 C4-dicarboxylic acid transporter DauA low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF3853 Multidrug transporter MdtC 0.91 GFF2781 Putative sulfate permease low > 78
Klebsiella michiganensis M5al 0.90 BWI76_RS19260 multidrug transporter subunit MdtC 0.92 BWI76_RS17465 C4-dicarboxylic acid transporter DauA low > 92
Serratia liquefaciens MT49 0.82 IAI46_18980 multidrug efflux RND transporter permease subunit MdtC 0.70 IAI46_10305 C4-dicarboxylic acid transporter DauA low > 86
Pectobacterium carotovorum WPP14 0.79 HER17_RS06315 multidrug efflux RND transporter permease subunit MdtC 0.72 HER17_RS09730 C4-dicarboxylic acid transporter DauA low > 75
Pantoea sp. MT58 0.79 IAI47_06865 multidrug efflux RND transporter permease subunit MdtC 0.15 IAI47_21130 SulP family inorganic anion transporter low > 76
Dickeya dianthicola 67-19 0.78 HGI48_RS15350 multidrug efflux RND transporter permease subunit MdtC 0.66 HGI48_RS12310 C4-dicarboxylic acid transporter DauA low > 71
Dickeya dadantii 3937 0.78 DDA3937_RS15270 multidrug efflux RND transporter permease subunit MdtC 0.66 DDA3937_RS12220 C4-dicarboxylic acid transporter DauA low > 74
Dickeya dianthicola ME23 0.78 DZA65_RS16170 multidrug efflux RND transporter permease subunit MdtC 0.66 DZA65_RS12750 C4-dicarboxylic acid transporter DauA low > 75
Erwinia tracheiphila SCR3 0.73 LU632_RS08685 mdtC multidrug efflux RND transporter permease subunit MdtC 0.12 LU632_RS02400 SulP family inorganic anion transporter low > 74
Herbaspirillum seropedicae SmR1 0.61 HSERO_RS07655 nodulation protein 0.14 HSERO_RS01545 sulfate transporter low > 78
Acidovorax sp. GW101-3H11 0.56 Ac3H11_3620 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA 0.29 Ac3H11_3820 Sulfate permease — —
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_22900 acriflavine resistance protein B 0.30 AO353_10315 sulfate transporter low > 101
Pseudomonas sp. S08-1 0.55 OH686_00930 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtC (RND type) 0.14 OH686_05645 Sulfate permease low > 80
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_3265 Acriflavin resistance plasma membrane protein 0.16 PfGW456L13_643 Sulfate permease low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_2484 Acriflavin resistance protein 0.15 Psyr_0026 Sulfate transporter/antisigma-factor antagonist STAS:Sulphate transporter low > 86
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_2484 Acriflavin resistance protein 0.15 Psyr_0026 Sulfate transporter/antisigma-factor antagonist STAS:Sulphate transporter low > 86
Pseudomonas stutzeri RCH2 0.53 Psest_2140 Cation/multidrug efflux pump 0.43 Psest_3240 Sulfate permease and related transporters (MFS superfamily) low > 67
Pseudomonas fluorescens SBW25 0.53 PFLU_RS13435 MMPL family transporter 0.18 PFLU_RS00125 SulP family inorganic anion transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS13435 MMPL family transporter 0.18 PFLU_RS00125 SulP family inorganic anion transporter low > 109
Rahnella sp. WP5 0.53 EX31_RS13375 MMPL family transporter 0.69 EX31_RS07290 C4-dicarboxylic acid transporter DauA low > 89
Pseudomonas putida KT2440 0.52 PP_3583 multidrug efflux transport system - membrane subunit 0.14 PP_4112 Sulphate transporter low > 96
Pseudomonas simiae WCS417 0.52 PS417_12750 acriflavine resistance protein B 0.17 PS417_00130 SulP family inorganic anion transporter low > 88
Castellaniella sp019104865 MT123 0.52 ABCV34_RS14625 efflux RND transporter permease subunit 0.28 ABCV34_RS08985 SulP family inorganic anion transporter low > 48
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_1271 Acriflavin resistance plasma membrane protein 0.46 Pf6N2E2_5239 Putative sulfate permease low > 103
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_25880 acriflavine resistance protein B 0.45 AO356_16580 transporter low > 104
Pseudomonas sp. RS175 0.51 PFR28_02193 Multidrug resistance protein MdtC 0.44 PFR28_03638 C4-dicarboxylic acid transporter DauA low > 88
Rhodopseudomonas palustris CGA009 0.49 TX73_018025 multidrug efflux RND transporter permease subunit 0.30 TX73_022415 SulP family inorganic anion transporter low > 86
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS29845 efflux RND transporter permease subunit 0.14 QEN71_RS12990 SulP family inorganic anion transporter low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF488 RND multidrug efflux transporter; Acriflavin resistance protein 0.27 GFF1211 Sulfate permease low > 90
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_06491 multidrug efflux pump 0.19 H281DRAFT_01715 sulfate permease, SulP family low > 103
Azospirillum brasilense Sp245 0.44 AZOBR_RS14670 multidrug transporter 0.09 AZOBR_RS27455 transporter low > 97
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS07780 nodulation protein 0.15 BPHYT_RS22120 sulfate transporter low > 109
Desulfovibrio vulgaris Hildenborough JW710 0.43 DVU0438 AcrB/AcrD/AcrF family protein (TIGR) 0.35 DVU0279 sulfate permease family protein (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.43 DvMF_1515 acriflavin resistance protein (RefSeq) 0.35 DvMF_1575 sulfate transporter (RefSeq) low > 51
Bosea sp. OAE506 0.41 ABIE41_RS20140 efflux RND transporter permease subunit 0.14 ABIE41_RS20915 SulP family inorganic anion transporter low > 77
Agrobacterium fabrum C58 0.39 Atu3274 AcrB/AcrD/AcrF family protein 0.15 Atu1156 sulfate permease low > 89
Variovorax sp. OAS795 0.39 ABID97_RS06490 efflux RND transporter permease subunit 0.27 ABID97_RS07465 SulP family inorganic anion transporter low > 91
Rhizobium sp. OAE497 0.38 ABIE40_RS05760 efflux RND transporter permease subunit 0.13 ABIE40_RS06660 SulP family inorganic anion transporter low > 107
Pontibacter actiniarum KMM 6156, DSM 19842 0.24 CA264_13040 acriflavin resistance protein 0.16 CA264_14595 sodium-independent anion transporter low > 74
Acinetobacter radioresistens SK82 0.23 MPMX26_02516 Multidrug resistance protein MdtC 0.16 MPMX26_01076 C4-dicarboxylic acid transporter DauA low > 36
Sinorhizobium meliloti 1021 0.23 SMc01457 transport transmembrane protein 0.26 SMc00476 transport transmembrane protein low > 103

Not shown: 8 genomes with orthologs for JDDGAC_28300 only; 33 genomes with orthologs for JDDGAC_06150 only