| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pantoea sp. MT58 | 1.0 | IAI47_14585 | | P-II family nitrogen regulator | 1.0 | IAI47_13045 | | spermidine/putrescine ABC transporter substrate-binding protein PotF | 0.33 | 13 |
| Serratia liquefaciens MT49 | 1.00 | IAI46_05080 | | P-II family nitrogen regulator | 0.75 | IAI46_08370 | | spermidine/putrescine ABC transporter substrate-binding protein PotF | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.99 | HER17_RS15790 | | P-II family nitrogen regulator | 0.81 | HER17_RS12500 | | spermidine/putrescine ABC transporter substrate-binding protein PotF | 0.68 | 6 |
| Dickeya dadantii 3937 | 0.99 | DDA3937_RS05695 | | P-II family nitrogen regulator | 0.78 | DDA3937_RS09460 | | spermidine/putrescine ABC transporter substrate-binding protein PotF | low | > 74 |
| Rahnella sp. WP5 | 0.99 | EX31_RS22315 | | P-II family nitrogen regulator | 0.80 | EX31_RS09630 | | spermidine/putrescine ABC transporter substrate-binding protein PotF | low | > 89 |
| Enterobacter sp. TBS_079 | 0.98 | MPMX20_01042 | | Nitrogen regulatory protein P-II 2 | 0.78 | MPMX20_01495 | | Putrescine-binding periplasmic protein | low | > 85 |
| Dickeya dianthicola 67-19 | 0.98 | HGI48_RS05740 | | P-II family nitrogen regulator | 0.77 | HGI48_RS09480 | | spermidine/putrescine ABC transporter substrate-binding protein PotF | low | > 71 |
| Dickeya dianthicola ME23 | 0.98 | DZA65_RS06065 | | P-II family nitrogen regulator | 0.77 | DZA65_RS09790 | | spermidine/putrescine ABC transporter substrate-binding protein PotF | low | > 75 |
| Enterobacter asburiae PDN3 | 0.98 | EX28DRAFT_2519 | | nitrogen regulatory protein P-II family | 0.78 | EX28DRAFT_2099 | | Spermidine/putrescine-binding periplasmic protein | low | > 76 |
| Klebsiella michiganensis M5al | 0.98 | BWI76_RS06600 | | nitrogen regulatory protein P-II 2 | 0.78 | BWI76_RS09460 | | spermidine/putrescine ABC transporter substrate-binding protein PotF | — | — |
| Escherichia coli BW25113 | 0.97 | b0450 | glnK | nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB (NCBI) | 0.77 | b0854 | potF | putrescine transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) | low | > 76 |
| Escherichia coli ECRC98 | 0.97 | JDDGAC_11920 | glnK | P-II family nitrogen regulator | 0.77 | JDDGAC_09595 | potF | spermidine/putrescine ABC transporter substrate-binding protein PotF | — | — |
| Escherichia coli ECRC101 | 0.97 | MCAODC_27490 | glnK | P-II family nitrogen regulator | 0.77 | MCAODC_25175 | potF | spermidine/putrescine ABC transporter substrate-binding protein PotF | — | — |
| Escherichia coli Nissle 1917 | 0.97 | ECOLIN_RS02695 | | P-II family nitrogen regulator | 0.77 | ECOLIN_RS04550 | | spermidine/putrescine ABC transporter substrate-binding protein PotF | — | — |
| Escherichia coli ECRC62 | 0.97 | BNILDI_22615 | glnK | P-II family nitrogen regulator | 0.77 | BNILDI_20585 | potF | spermidine/putrescine ABC transporter substrate-binding protein PotF | — | — |
| Escherichia fergusonii Becca | 0.97 | EFB2_03607 | | Nitrogen regulatory protein P-II 2 | 0.77 | EFB2_03207 | | Putrescine-binding periplasmic protein | low | > 86 |
| Escherichia coli ECRC102 | 0.97 | NIAGMN_06320 | glnK | P-II family nitrogen regulator | 0.77 | NIAGMN_04005 | potF | spermidine/putrescine ABC transporter substrate-binding protein PotF | — | — |
| Escherichia coli BL21 | 0.97 | ECD_00402 | | nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB | 0.77 | ECD_00859 | | putrescine ABC transporter periplasmic binding protein | low | > 60 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.97 | OHPLBJKB_03223 | | Nitrogen regulatory protein P-II 2 | 0.77 | OHPLBJKB_02814 | | Putrescine-binding periplasmic protein | low | > 73 |
| Escherichia coli ECRC101 | 0.97 | OKFHMN_08265 | glnK | P-II family nitrogen regulator | 0.77 | OKFHMN_05960 | potF | spermidine/putrescine ABC transporter substrate-binding protein PotF | — | — |
| Escherichia coli ECOR38 | 0.97 | HEPCGN_06880 | glnK | P-II family nitrogen regulator | 0.77 | HEPCGN_02070 | potF | spermidine/putrescine ABC transporter substrate-binding protein PotF | low | > 85 |
| Escherichia coli ECRC99 | 0.97 | KEDOAH_19700 | glnK | P-II family nitrogen regulator | 0.77 | KEDOAH_21950 | potF | spermidine/putrescine ABC transporter substrate-binding protein PotF | — | — |
| Escherichia coli ECOR27 | 0.97 | NOLOHH_01200 | glnK | P-II family nitrogen regulator | 0.77 | NOLOHH_22330 | potF | spermidine/putrescine ABC transporter substrate-binding protein PotF | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.96 | GFF4367 | | Nitrogen regulatory protein P-II, glnK | 0.76 | GFF758 | | Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) | low | > 78 |
| Pseudomonas stutzeri RCH2 | 0.81 | Psest_3773 | | Nitrogen regulatory protein PII | 0.61 | Psest_4284 | | Spermidine/putrescine-binding periplasmic protein | — | — |
| Pseudomonas sp. S08-1 | 0.80 | OH686_13755 | | Nitrogen regulatory protein P-II, GlnK | 0.60 | OH686_11465 | | Putrescine ABC transporter putrescine-binding protein PotF | — | — |
| Marinobacter adhaerens HP15 | 0.78 | HP15_275 | | nitrogen regulatory protein PII | 0.47 | HP15_940 | | putrescine ABC transporter, periplasmic putrescine-binding protein | — | — |
| Pseudomonas sp. RS175 | 0.78 | PFR28_04383 | | Nitrogen regulatory protein P-II 2 | 0.57 | PFR28_04295 | | Putrescine-binding periplasmic protein SpuD | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.78 | Pf6N2E2_4411 | | Nitrogen regulatory protein P-II, glnK | 0.58 | Pf6N2E2_4513 | | Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.78 | Pf1N1B4_2166 | | Nitrogen regulatory protein P-II, glnK | 0.58 | Pf1N1B4_2259 | | Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) | — | — |
| Pseudomonas simiae WCS417 | 0.78 | PS417_27620 | | nitrogen regulatory protein P-II 1 | 0.56 | PS417_27125 | | spermidine/putrescine ABC transporter substrate-binding protein | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.78 | PFLU_RS29305 | | P-II family nitrogen regulator | 0.56 | PFLU_RS28775 | | polyamine ABC transporter substrate-binding protein | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.78 | PfGW456L13_837 | | Nitrogen regulatory protein P-II, glnK | 0.58 | PfGW456L13_928 | | Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) | — | — |
| Pseudomonas putida KT2440 | 0.78 | PP_5234 | | activator of NRII(GlnL/NtrB) phosphatase | 0.57 | PP_3147 | | putrescine-binding periplasmic protein | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.78 | Psyr_0190 | | nitrogen regulatory protein P-II | 0.58 | Psyr_4865 | | extracellular solute-binding protein, family 1 | — | — |
| Pseudomonas fluorescens SBW25 | 0.78 | PFLU_RS29305 | | P-II family nitrogen regulator | 0.56 | PFLU_RS28775 | | polyamine ABC transporter substrate-binding protein | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.78 | AO356_12700 | | transcriptional regulator | 0.57 | AO356_13155 | | spermidine/putrescine ABC transporter substrate-binding protein | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.78 | AO353_09075 | | transcriptional regulator | 0.58 | AO353_08580 | | spermidine/putrescine ABC transporter substrate-binding protein | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.78 | Psyr_0190 | | nitrogen regulatory protein P-II | 0.58 | Psyr_4865 | | extracellular solute-binding protein, family 1 | — | — |
| Azospirillum sp. SherDot2 | 0.77 | MPMX19_05521 | | Nitrogen regulatory protein P-II 2 | 0.39 | MPMX19_04883 | | Spermidine-binding periplasmic protein SpuE | low | > 112 |
| Azospirillum brasilense Sp245 | 0.76 | AZOBR_RS02290 | | nitrogen regulatory protein P-II 1 | 0.41 | AZOBR_RS08845 | | ABC transporter substrate-binding protein | low | > 97 |
| Acidovorax sp. GW101-3H11 | 0.76 | Ac3H11_3402 | | Nitrogen regulatory protein P-II | 0.14 | Ac3H11_189 | | ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) | — | — |
| Shewanella sp. ANA-3 | 0.73 | Shewana3_3532 | | nitrogen regulatory protein P-II (RefSeq) | 0.56 | Shewana3_3097 | | extracellular solute-binding protein (RefSeq) | low | > 73 |
| Magnetospirillum magneticum AMB-1 | 0.73 | AMB_RS00075 | | P-II family nitrogen regulator | 0.46 | AMB_RS13210 | | polyamine ABC transporter substrate-binding protein | low | > 64 |
| Shewanella oneidensis MR-1 | 0.73 | SO0761 | glnB-1 | nitrogen regulatory protein P-II 1 (NCBI ptt file) | 0.54 | SO1270 | | polyamine ABC transporter, periplasmic polyamine-binding protein (NCBI ptt file) | 0.60 | 9 |
| Shewanella amazonensis SB2B | 0.73 | Sama_0650 | | nitrogen regulatory protein P-II (RefSeq) | 0.55 | Sama_2642 | | polyamine ABC transporter, periplasmic polyamine-binding protein (RefSeq) | low | > 62 |
| Rhodopseudomonas palustris CGA009 | 0.72 | TX73_001430 | | P-II family nitrogen regulator | 0.50 | TX73_010380 | | polyamine ABC transporter substrate-binding protein | low | > 86 |
| Bosea sp. OAE506 | 0.71 | ABIE41_RS04760 | | P-II family nitrogen regulator | 0.49 | ABIE41_RS21650 | | polyamine ABC transporter substrate-binding protein | low | > 77 |
| Agrobacterium fabrum C58 | 0.71 | Atu2757 | | nitrogen regulatory protein PII | 0.57 | Atu0609 | | ABC transporter, substrate binding protein (putrescine) | low | > 89 |
| Rhizobium sp. OAE497 | 0.71 | ABIE40_RS18425 | | P-II family nitrogen regulator | 0.54 | ABIE40_RS03265 | | polyamine ABC transporter substrate-binding protein | low | > 107 |
| Sinorhizobium meliloti 1021 | 0.70 | SMc03806 | | nitrogen regulatory protein PII 2 | 0.52 | SMc00770 | | putrescine-binding periplasmic protein | low | > 103 |
| Phaeobacter inhibens DSM 17395 | 0.68 | PGA1_c29400 | | nitrogen regulatory protein P-II | 0.52 | PGA1_c34420 | | putrescine-binding periplasmic protein PotF | low | > 62 |
Not shown: 13 genomes with orthologs for IAI47_14585 only; 15 genomes with orthologs for IAI47_13045 only