Conservation of cofitness between IAI47_04845 and IAI47_06235 in Pantoea sp. MT58

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_04845 L-aspartate oxidase 1.0 IAI47_06235 4-phosphoerythronate dehydrogenase PdxB 0.77 10
Klebsiella michiganensis M5al 0.83 BWI76_RS21360 L-aspartate oxidase 0.75 BWI76_RS20390 erythronate-4-phosphate dehydrogenase 0.67 3
Enterobacter asburiae PDN3 0.82 EX28DRAFT_0071 L-aspartate oxidase (EC 1.4.3.16) 0.75 EX28DRAFT_0284 Phosphoglycerate dehydrogenase and related dehydrogenases 0.84 3
Enterobacter sp. TBS_079 0.82 MPMX20_03445 L-aspartate oxidase 0.75 MPMX20_03255 Erythronate-4-phosphate dehydrogenase 0.31 70
Serratia liquefaciens MT49 0.82 IAI46_19590 L-aspartate oxidase 0.72 IAI46_17850 4-phosphoerythronate dehydrogenase PdxB low > 86
Escherichia coli BW25113 0.82 b2574 nadB L-aspartate oxidase (NCBI) 0.75 b2320 pdxB erythronate-4-phosphate dehydrogenase (NCBI) 0.68 4
Escherichia coli BL21 0.82 ECD_02468 quinolinate synthase, L-aspartate oxidase (B protein) subunit 0.76 ECD_02245 erythronate-4-phosphate dehydrogenase low > 60
Escherichia coli ECRC62 0.81 BNILDI_11845 nadB L-aspartate oxidase 0.76 BNILDI_13215 pdxB 4-phosphoerythronate dehydrogenase PdxB — —
Escherichia coli ECOR38 0.81 HEPCGN_20515 nadB L-aspartate oxidase 0.75 HEPCGN_21865 pdxB 4-phosphoerythronate dehydrogenase PdxB 0.55 63
Escherichia coli ECOR27 0.81 NOLOHH_13045 nadB L-aspartate oxidase 0.76 NOLOHH_14295 pdxB 4-phosphoerythronate dehydrogenase PdxB low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.81 OHPLBJKB_01133 L-aspartate oxidase 0.76 OHPLBJKB_01385 Erythronate-4-phosphate dehydrogenase low > 73
Escherichia coli ECRC101 0.81 MCAODC_11900 nadB L-aspartate oxidase 0.75 MCAODC_13700 pdxB 4-phosphoerythronate dehydrogenase PdxB — —
Escherichia coli ECRC101 0.81 OKFHMN_21370 nadB L-aspartate oxidase 0.75 OKFHMN_22660 pdxB 4-phosphoerythronate dehydrogenase PdxB — —
Escherichia coli ECRC102 0.81 NIAGMN_19140 nadB L-aspartate oxidase 0.75 NIAGMN_20435 pdxB 4-phosphoerythronate dehydrogenase PdxB — —
Pectobacterium carotovorum WPP14 0.81 HER17_RS05775 L-aspartate oxidase 0.70 HER17_RS06980 4-phosphoerythronate dehydrogenase PdxB low > 75
Escherichia coli ECRC98 0.81 JDDGAC_25035 nadB L-aspartate oxidase 0.75 JDDGAC_26620 pdxB 4-phosphoerythronate dehydrogenase PdxB — —
Escherichia coli ECRC99 0.81 KEDOAH_06850 nadB L-aspartate oxidase 0.75 KEDOAH_05535 pdxB 4-phosphoerythronate dehydrogenase PdxB — —
Escherichia coli Nissle 1917 0.81 ECOLIN_RS14570 L-aspartate oxidase 0.76 ECOLIN_RS13445 4-phosphoerythronate dehydrogenase PdxB low > 52
Escherichia fergusonii Becca 0.81 EFB2_01322 L-aspartate oxidase 0.76 EFB2_01538 Erythronate-4-phosphate dehydrogenase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.80 GFF2106 L-aspartate oxidase (EC 1.4.3.16) 0.77 GFF1936 Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290) low > 78
Dickeya dianthicola 67-19 0.79 HGI48_RS15855 L-aspartate oxidase 0.70 HGI48_RS14445 4-phosphoerythronate dehydrogenase PdxB low > 71
Dickeya dianthicola ME23 0.79 DZA65_RS16935 L-aspartate oxidase 0.74 DZA65_RS15380 4-phosphoerythronate dehydrogenase PdxB low > 75
Dickeya dadantii 3937 0.79 DDA3937_RS15770 L-aspartate oxidase 0.74 DDA3937_RS14475 4-phosphoerythronate dehydrogenase PdxB low > 74
Rahnella sp. WP5 0.79 EX31_RS21795 L-aspartate oxidase 0.72 EX31_RS19610 4-phosphoerythronate dehydrogenase PdxB 0.76 3
Vibrio cholerae E7946 ATCC 55056 0.74 CSW01_12495 L-aspartate oxidase 0.48 CSW01_10525 DUF3410 domain-containing protein — —
Shewanella loihica PV-4 0.70 Shew_1047 L-aspartate oxidase (RefSeq) 0.41 Shew_2309 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) — —
Shewanella amazonensis SB2B 0.70 Sama_0873 L-aspartate oxidase (RefSeq) 0.43 Sama_2153 erythronate-4-phosphate dehydrogenase (RefSeq) — —
Shewanella oneidensis MR-1 0.70 SO1341 nadB L-aspartate oxidase (NCBI ptt file) 0.44 SO3071 pdxB erythronate-4-phosphate dehydrogenase (NCBI ptt file) — —
Shewanella sp. ANA-3 0.70 Shewana3_3033 L-aspartate oxidase (RefSeq) 0.44 Shewana3_1476 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region (RefSeq) — —
Alteromonas macleodii MIT1002 0.69 MIT1002_02720 L-aspartate oxidase 0.33 MIT1002_02532 Erythronate-4-phosphate dehydrogenase — —
Pseudomonas sp. RS175 0.66 PFR28_00689 L-aspartate oxidase 0.41 PFR28_01103 Erythronate-4-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N2E3 0.66 AO353_17620 L-aspartate oxidase 0.43 AO353_00545 erythronate-4-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N2C3 0.66 AO356_04580 L-aspartate oxidase 0.40 AO356_02365 erythronate-4-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N1B4 0.65 Pf1N1B4_3322 L-aspartate oxidase (EC 1.4.3.16) 0.43 Pf1N1B4_3893 Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290) — —
Pseudomonas fluorescens GW456-L13 0.65 PfGW456L13_4517 L-aspartate oxidase (EC 1.4.3.16) 0.43 PfGW456L13_4048 Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290) — —
Pseudomonas simiae WCS417 0.65 PS417_07115 L-aspartate oxidase 0.42 PS417_07535 erythronate-4-phosphate dehydrogenase — —
Pseudomonas fluorescens SBW25 0.65 PFLU_RS07225 L-aspartate oxidase 0.42 PFLU_RS07615 4-phosphoerythronate dehydrogenase PdxB — —
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_3959 L-aspartate oxidase 0.44 Psyr_1828 4-phosphoerythronate dehydrogenase — —
Pseudomonas stutzeri RCH2 0.65 Psest_3101 L-aspartate oxidase 0.37 Psest_2548 Phosphoglycerate dehydrogenase and related dehydrogenases — —
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS07225 L-aspartate oxidase 0.42 PFLU_RS07615 4-phosphoerythronate dehydrogenase PdxB — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_3959 L-aspartate oxidase 0.44 Psyr_1828 4-phosphoerythronate dehydrogenase — —
Kangiella aquimarina DSM 16071 0.65 B158DRAFT_2179 L-aspartate oxidase (EC 1.4.3.16) 0.38 B158DRAFT_1308 4-phosphoerythronate dehydrogenase (EC 1.1.1.290) — —
Pseudomonas sp. S08-1 0.64 OH686_20040 L-aspartate oxidase 0.37 OH686_02070 Erythronate-4-phosphate dehydrogenase — —
Pseudomonas putida KT2440 0.64 PP_1426 L-aspartate oxidase 0.39 PP_2117 Erythronate-4-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_2758 L-aspartate oxidase (EC 1.4.3.16) 0.41 Pf6N2E2_2297 Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290) — —
Marinobacter adhaerens HP15 0.63 HP15_774 L-aspartate oxidase 0.36 HP15_2098 erythronate-4-phosphate dehydrogenase — —
Acinetobacter radioresistens SK82 0.60 MPMX26_02162 L-aspartate oxidase 0.31 MPMX26_02238 Erythronate-4-phosphate dehydrogenase low > 36
Parabacteroides merdae CL09T00C40 0.41 HMPREF1078_RS06605 L-aspartate oxidase 0.31 HMPREF1078_RS19150 4-phosphoerythronate dehydrogenase PdxB — —
Phocaeicola dorei CL03T12C01 0.41 ABI39_RS05945 L-aspartate oxidase 0.35 ABI39_RS06250 4-phosphoerythronate dehydrogenase PdxB — —
Phocaeicola vulgatus CL09T03C04 0.41 HMPREF1058_RS11085 L-aspartate oxidase 0.35 HMPREF1058_RS10820 4-phosphoerythronate dehydrogenase PdxB — —
Bacteroides thetaiotaomicron VPI-5482 0.40 BT3184 L-aspartate oxidase (NCBI ptt file) 0.32 BT3361 erythronate-4-phosphate dehydrogenase (NCBI ptt file) 0.87 2
Bacteroides stercoris CC31F 0.40 HMPREF1181_RS01800 L-aspartate oxidase 0.34 HMPREF1181_RS02440 4-phosphoerythronate dehydrogenase PdxB — —
Bacteroides ovatus ATCC 8483 0.40 BACOVA_02888 L-aspartate oxidase 0.33 BACOVA_01953 4-phosphoerythronate dehydrogenase 0.78 57

Not shown: 41 genomes with orthologs for IAI47_04845 only; 1 genomes with orthologs for IAI47_06235 only