Conservation of cofitness between HSERO_RS16725 and HSERO_RS20320 in Herbaspirillum seropedicae SmR1

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS16725 ABC transporter permease 1.0 HSERO_RS20320 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) 0.25 8
Cupriavidus basilensis FW507-4G11 0.84 RR42_RS18600 ABC transporter permease 0.71 RR42_RS18890 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase — —
Sinorhizobium meliloti 1021 0.73 SM_b20659 sugar uptake ABC transporter permease 0.47 SMc02570 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 103
Rhodopseudomonas palustris CGA009 0.67 TX73_017955 sugar ABC transporter permease 0.47 TX73_001620 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —
Bosea sp. OAE506 0.64 ABIE41_RS06425 sugar ABC transporter permease 0.48 ABIE41_RS03950 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —
Rhizobium sp. OAE497 0.29 ABIE40_RS21240 sugar ABC transporter permease 0.48 ABIE40_RS19445 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 107
Phaeobacter inhibens DSM 17395 0.29 PGA1_c16700 binding protein-dependent transport system, inner membrane component 0.46 PGA1_c09270 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase HisA — —
Agrobacterium fabrum C58 0.29 Atu2603 ABC transporter, membrane spanning protein (maltose) 0.46 Atu0040 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase low > 89
Rahnella sp. WP5 0.27 EX31_RS07050 sugar ABC transporter permease 0.24 EX31_RS11460 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 89
Serratia liquefaciens MT49 0.27 IAI46_11765 sugar ABC transporter permease 0.23 IAI46_08190 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 86
Synechococcus elongatus PCC 7942 0.27 Synpcc7942_0949 permease protein of sugar ABC transporter 0.40 Synpcc7942_1829 hisA 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase — —
Castellaniella sp019104865 MT123 0.26 ABCV34_RS07880 sugar ABC transporter permease 0.69 ABCV34_RS11245 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 48
Pantoea sp. MT58 0.26 IAI47_20095 sugar ABC transporter permease 0.23 IAI47_07070 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 76
Paraburkholderia bryophila 376MFSha3.1 0.25 H281DRAFT_03746 carbohydrate ABC transporter membrane protein 1, CUT1 family 0.74 H281DRAFT_05658 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase — —
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS15900 sugar ABC transporter permease 0.73 QEN71_RS27840 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 153
Burkholderia phytofirmans PsJN 0.24 BPHYT_RS35665 ABC transporter permease 0.74 BPHYT_RS17685 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 109
Paraburkholderia graminis OAS925 0.24 ABIE53_004503 multiple sugar transport system permease protein 0.73 ABIE53_003696 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase — —
Erwinia tracheiphila SCR3 0.24 LU632_RS00815 sugar ABC transporter permease 0.23 LU632_RS08925 hisA 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 74
Azospirillum brasilense Sp245 0.23 AZOBR_RS25585 ABC transporter permease 0.49 AZOBR_RS01680 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 97
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF4373 Maltose/maltodextrin ABC transporter, permease protein MalF 0.71 GFF1310 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) — —
Pseudomonas syringae pv. syringae B728a 0.22 Psyr_0761 carbohydrate ABC transporter membrane protein 1, CUT1 family 0.55 Psyr_4894 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.22 Psyr_0761 carbohydrate ABC transporter membrane protein 1, CUT1 family 0.55 Psyr_4894 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 86
Variovorax sp. OAS795 0.21 ABID97_RS29290 sugar ABC transporter permease 0.73 ABID97_RS23130 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_1647 Maltose/maltodextrin ABC transporter, permease protein MalF 0.54 Pf6N2E2_3839 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 103
Bifidobacterium breve UCC2003 0.20 BBR_RS20185 sugar ABC transporter permease 0.26 BBR_RS17030 bifunctional 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase/phosphoribosylanthranilate isomerase PriA low > 34
Enterobacter asburiae PDN3 0.20 EX28DRAFT_0982 ABC-type sugar transport systems, permease components 0.22 EX28DRAFT_0535 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) low > 76
Pseudomonas fluorescens FW300-N2E3 0.19 AO353_25120 ABC transporter permease 0.55 AO353_12085 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 101
Enterobacter sp. TBS_079 0.19 MPMX20_02466 Inner membrane ABC transporter permease protein YcjO 0.23 MPMX20_03006 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 85
Pectobacterium carotovorum WPP14 0.19 HER17_RS03520 sugar ABC transporter permease 0.24 HER17_RS12250 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 75
Escherichia coli BL21 0.19 ECD_01288 putative sugar ABC transporter permease 0.22 ECD_01926 N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'-phosphoribosyl)-4-imidazolecarboxamide isomerase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.19 OHPLBJKB_02371 Inner membrane ABC transporter permease protein YcjO 0.22 OHPLBJKB_01676 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 73
Escherichia fergusonii Becca 0.19 EFB2_02616 Inner membrane ABC transporter permease protein YcjO 0.22 EFB2_01832 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 86
Escherichia coli Nissle 1917 0.19 ECOLIN_RS07885 sugar ABC transporter permease 0.22 ECOLIN_RS11965 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —
Escherichia coli ECRC100 0.18 OKFHMN_02365 ugpA sugar ABC transporter permease 0.22 OKFHMN_24495 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase low > 80
Escherichia coli ECRC102 0.18 NIAGMN_26535 ugpA sugar ABC transporter permease 0.22 NIAGMN_22440 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase — —
Pseudomonas fluorescens FW300-N2C3 0.18 AO356_28575 ABC transporter permease 0.54 AO356_09800 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 104
Escherichia coli BW25113 0.18 b1311 ycjO predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) 0.21 b2024 hisA N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) low > 76
Escherichia coli ECOR27 0.18 NOLOHH_20060 ugpA sugar ABC transporter permease 0.22 NOLOHH_15810 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase low > 75
Escherichia coli ECRC98 0.18 JDDGAC_04910 ugpA sugar ABC transporter permease 0.22 JDDGAC_28605 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase low > 86
Escherichia coli ECRC101 0.18 MCAODC_15905 ugpA sugar ABC transporter permease 0.22 MCAODC_20445 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase low > 87
Escherichia coli ECRC99 0.18 KEDOAH_26410 ugpA sugar ABC transporter permease 0.22 KEDOAH_03655 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase — —
Escherichia coli ECOR38 0.18 HEPCGN_25825 ugpA sugar ABC transporter permease 0.22 HEPCGN_03200 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase low > 87
Pseudomonas fluorescens FW300-N1B4 0.17 Pf1N1B4_5113 sucrose ABC transporter, permease component 1 (from data) 0.55 Pf1N1B4_1624 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 87

Not shown: 0 genomes with orthologs for HSERO_RS16725 only; 59 genomes with orthologs for HSERO_RS20320 only