Conservation of cofitness between HSERO_RS03475 and HSERO_RS19630 in Herbaspirillum seropedicae SmR1

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS03475 NUDIX hydrolase 1.0 HSERO_RS19630 AMP nucleosidase 0.32 18
Acidovorax sp. GW101-3H11 0.60 Ac3H11_4361 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.61 Ac3H11_4669 AMP nucleosidase (EC 3.2.2.4) low > 79
Ralstonia solanacearum UW163 0.59 UW163_RS07885 NUDIX hydrolase 0.52 UW163_RS23015 AMP nucleosidase — —
Ralstonia solanacearum PSI07 0.59 RPSI07_RS11560 NUDIX hydrolase 0.52 RPSI07_RS00695 AMP nucleosidase low > 81
Hydrogenophaga sp. GW460-11-11-14-LB1 0.59 GFF2602 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.59 GFF370 AMP nucleosidase (EC 3.2.2.4) low > 90
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS05740 NUDIX hydrolase 0.52 RALBFv3_RS22470 AMP nucleosidase low > 76
Ralstonia solanacearum GMI1000 0.59 RS_RS13630 NUDIX hydrolase 0.52 RS_RS18175 AMP nucleosidase 0.33 37
Paraburkholderia graminis OAS925 0.59 ABIE53_000811 8-oxo-dGTP pyrophosphatase MutT (NUDIX family) 0.68 ABIE53_004847 AMP nucleosidase low > 113
Variovorax sp. SCN45 0.58 GFF4911 Nudix-like NDP and NTP phosphohydrolase NudJ 0.59 GFF3583 AMP nucleosidase (EC 3.2.2.4) low > 127
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_04652 ADP-ribose pyrophosphatase YjhB, NUDIX family 0.68 H281DRAFT_06027 AMP nucleosidase low > 103
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS01335 NUDIX hydrolase 0.51 ABZR87_RS17145 AMP nucleosidase low > 80
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS17470 NUDIX hydrolase 0.52 RR42_RS21185 AMP nucleosidase low > 128
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS26735 NUDIX hydrolase 0.69 QEN71_RS17860 AMP nucleosidase low > 153
Variovorax sp. OAS795 0.55 ABID97_RS04420 NUDIX hydrolase 0.59 ABID97_RS00880 AMP nucleosidase low > 91
Burkholderia phytofirmans PsJN 0.54 BPHYT_RS03365 NUDIX hydrolase 0.68 BPHYT_RS33635 AMP nucleosidase low > 109
Pseudomonas fluorescens SBW25 0.42 PFLU_RS18575 NUDIX hydrolase 0.41 PFLU_RS26515 AMP nucleosidase low > 109
Pseudomonas fluorescens SBW25-INTG 0.42 PFLU_RS18575 NUDIX hydrolase 0.41 PFLU_RS26515 AMP nucleosidase low > 109
Pseudomonas simiae WCS417 0.41 PS417_16535 NUDIX hydrolase 0.41 PS417_24585 AMP nucleosidase low > 88
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_2640 Nudix-like NDP and NTP phosphohydrolase YmfB 0.40 PfGW456L13_1388 AMP nucleosidase (EC 3.2.2.4) low > 87
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_22115 NUDIX hydrolase 0.40 AO356_15450 AMP nucleosidase low > 104
Pseudomonas sp. RS175 0.40 PFR28_02618 Phosphatase NudJ 0.40 PFR28_03840 AMP nucleosidase low > 88
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_27700 NUDIX hydrolase 0.40 AO353_06335 AMP nucleosidase low > 101
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_287 Nudix-like NDP and NTP phosphohydrolase YmfB 0.40 Pf6N2E2_5027 AMP nucleosidase (EC 3.2.2.4) low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_3189 NUDIX hydrolase 0.40 Psyr_4337 AMP nucleosidase low > 86
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_4049 Nudix-like NDP and NTP phosphohydrolase YmfB 0.40 Pf1N1B4_2721 AMP nucleosidase (EC 3.2.2.4) low > 87
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_3189 NUDIX hydrolase 0.40 Psyr_4337 AMP nucleosidase low > 86
Pseudomonas stutzeri RCH2 0.38 Psest_2022 ADP-ribose pyrophosphatase 0.41 Psest_0542 AMP nucleosidase low > 67
Pseudomonas sp. S08-1 0.38 OH686_00215 Nudix-like NDP and NTP phosphohydrolase NudJ 0.39 OH686_08855 AMP nucleosidase low > 80
Pseudomonas putida KT2440 0.37 PP_4013 MutT/nudix family protein 0.40 PP_4779 AMP nucleosidase low > 96
Rahnella sp. WP5 0.29 EX31_RS24580 NUDIX hydrolase 0.39 EX31_RS17755 AMP nucleosidase low > 89
Escherichia coli ECRC102 0.24 NIAGMN_24895 nudJ phosphatase NudJ 0.41 NIAGMN_22685 amn AMP nucleosidase — —
Escherichia coli Nissle 1917 0.24 ECOLIN_RS06630 phosphatase NudJ 0.41 ECOLIN_RS11455 AMP nucleosidase — —
Escherichia coli ECOR38 0.24 HEPCGN_24225 nudJ phosphatase NudJ 0.41 HEPCGN_03515 amn AMP nucleosidase low > 87
Escherichia coli BW25113 0.24 b1134 ymfB bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) 0.41 b1982 amn AMP nucleosidase (NCBI) low > 76
Escherichia coli ECRC101 0.24 MCAODC_22335 nudJ phosphatase NudJ 0.41 MCAODC_20210 amn AMP nucleosidase low > 87
Escherichia coli BL21 0.24 ECD_01132 bifunctional thiamine pyrimidine pyrophosphate hydrolase and thiamine pyrophosphate hydrolase 0.41 ECD_01894 AMP nucleosidase — —
Escherichia coli ECRC62 0.24 BNILDI_19060 nudJ phosphatase NudJ 0.41 BNILDI_14920 amn AMP nucleosidase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_02534 Phosphatase NudJ 0.40 OHPLBJKB_01726 AMP nucleosidase low > 73
Escherichia coli ECRC100 0.24 OKFHMN_00750 nudJ phosphatase NudJ 0.41 OKFHMN_25180 amn AMP nucleosidase low > 80
Escherichia coli ECOR27 0.24 NOLOHH_20895 nudJ phosphatase NudJ 0.41 NOLOHH_16125 amn AMP nucleosidase low > 75
Escherichia fergusonii Becca 0.24 EFB2_02841 Phosphatase NudJ 0.41 EFB2_01930 AMP nucleosidase low > 86
Escherichia coli ECRC99 0.24 KEDOAH_24835 nudJ phosphatase NudJ 0.41 KEDOAH_02930 amn AMP nucleosidase — —
Escherichia coli ECRC98 0.24 JDDGAC_06615 nudJ phosphatase NudJ 0.41 JDDGAC_29310 amn AMP nucleosidase low > 86
Enterobacter sp. TBS_079 0.24 MPMX20_01818 Phosphatase NudJ 0.41 MPMX20_02987 AMP nucleosidase low > 85
Klebsiella michiganensis M5al 0.23 BWI76_RS11320 NUDIX hydrolase 0.41 BWI76_RS18545 AMP nucleosidase — —
Enterobacter asburiae PDN3 0.23 EX28DRAFT_1796 ADP-ribose pyrophosphatase 0.41 EX28DRAFT_0555 AMP nucleosidase low > 76
Serratia liquefaciens MT49 0.23 IAI46_10445 NUDIX hydrolase 0.40 IAI46_16720 AMP nucleosidase low > 86
Erwinia tracheiphila SCR3 0.23 LU632_RS14570 NUDIX hydrolase 0.41 LU632_RS14885 AMP nucleosidase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.22 GFF3419 Nudix-like NDP and NTP phosphohydrolase YmfB 0.42 GFF3974 AMP nucleosidase (EC 3.2.2.4) low > 78
Pectobacterium carotovorum WPP14 0.22 HER17_RS11620 NUDIX hydrolase 0.39 HER17_RS14005 AMP nucleosidase low > 75
Dickeya dadantii 3937 0.22 DDA3937_RS11480 NUDIX hydrolase 0.40 DDA3937_RS06940 AMP nucleosidase low > 74
Dickeya dianthicola 67-19 0.22 HGI48_RS11525 NUDIX hydrolase 0.39 HGI48_RS06920 AMP nucleosidase low > 71
Dickeya dianthicola ME23 0.22 DZA65_RS11860 NUDIX hydrolase 0.39 DZA65_RS07265 AMP nucleosidase low > 75
Pantoea sp. MT58 0.21 IAI47_11910 NUDIX hydrolase 0.40 IAI47_07865 AMP nucleosidase low > 76

Not shown: 14 genomes with orthologs for HSERO_RS03475 only; 13 genomes with orthologs for HSERO_RS19630 only