Conservation of cofitness between HSERO_RS12675 and HSERO_RS11070 in Herbaspirillum seropedicae SmR1

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS12675 AraC family transcriptional regulator 1.0 HSERO_RS11070 nicotinate-nucleotide pyrophosphorylase 0.32 16
Sphingomonas koreensis DSMZ 15582 0.47 Ga0059261_1673 transcriptional regulator, AraC family with amidase-like domain 0.34 Ga0059261_0061 nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19)
Pseudomonas fluorescens SBW25 0.46 PFLU_RS10275 GlxA family transcriptional regulator 0.50 PFLU_RS03970 carboxylating nicotinate-nucleotide diphosphorylase low > 109
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_156 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.50 Pf1N1B4_1153 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS10275 GlxA family transcriptional regulator 0.50 PFLU_RS03970 carboxylating nicotinate-nucleotide diphosphorylase low > 109
Pseudomonas simiae WCS417 0.45 PS417_09670 AraC family transcriptional regulator 0.50 PS417_03925 nicotinate-nucleotide pyrophosphorylase low > 88
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_04312 transcriptional regulator, AraC family with amidase-like domain 0.59 H281DRAFT_04070 nicotinate-nucleotide pyrophosphorylase [carboxylating] low > 103
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_6090 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.49 Pf6N2E2_3346 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) low > 103
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_2369 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.49 PfGW456L13_5082 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) low > 87
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_19580 AraC family transcriptional regulator 0.50 AO353_05520 nicotinate-nucleotide pyrophosphorylase low > 101
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_21045 AraC family transcriptional regulator 0.49 AO356_07370 nicotinate-nucleotide pyrophosphorylase low > 104
Pseudomonas sp. RS175 0.44 PFR28_02891 HTH-type transcriptional regulator CdhR 0.52 PFR28_00098 Nicotinate-nucleotide pyrophosphorylase [carboxylating] low > 88
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS04350 helix-turn-helix domain-containing protein 0.63 QEN71_RS03065 carboxylating nicotinate-nucleotide diphosphorylase low > 153
Pseudomonas sp. S08-1 0.41 OH686_23095 Transcriptional regulator, AraC family 0.48 OH686_16520 nicotinate-nucleotide diphosphorylase (carboxylating) low > 80
Variovorax sp. OAS795 0.38 ABID97_RS26935 GlxA family transcriptional regulator 0.48 ABID97_RS07410 carboxylating nicotinate-nucleotide diphosphorylase low > 91
Variovorax sp. SCN45 0.38 GFF5573 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.45 GFF2574 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) low > 127
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS28635 AraC family transcriptional regulator 0.65 RR42_RS17015 nicotinate-nucleotide pyrophosphorylase low > 128
Desulfovibrio vulgaris Miyazaki F 0.37 DvMF_2560 transcriptional regulator, AraC family (RefSeq) 0.29 DvMF_0524 nicotinate-nucleotide pyrophosphorylase (RefSeq)
Enterobacter sp. TBS_079 0.34 MPMX20_02687 HTH-type transcriptional regulator CdhR 0.40 MPMX20_00800 Nicotinate-nucleotide pyrophosphorylase [carboxylating] low > 85
Serratia liquefaciens MT49 0.34 IAI46_16680 GlxA family transcriptional regulator 0.43 IAI46_03530 carboxylating nicotinate-nucleotide diphosphorylase low > 86
Pseudomonas stutzeri RCH2 0.33 Psest_0752 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.50 Psest_0718 nicotinate-nucleotide pyrophosphorylase low > 67
Enterobacter asburiae PDN3 0.33 EX28DRAFT_0781 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.41 EX28DRAFT_3702 nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19) low > 76
Klebsiella michiganensis M5al 0.32 BWI76_RS12980 AraC family transcriptional regulator 0.39 BWI76_RS04845 nicotinate-nucleotide pyrophosphorylase low > 92
Kangiella aquimarina DSM 16071 0.31 B158DRAFT_0570 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.42 B158DRAFT_2135 nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19)
Ralstonia solanacearum IBSBF1503 0.30 RALBFv3_RS23400 AraC family transcriptional regulator 0.64 RALBFv3_RS04730 nicotinate-nucleotide diphosphorylase (carboxylating) low > 76
Ralstonia solanacearum UW163 0.30 UW163_RS16650 AraC family transcriptional regulator 0.64 UW163_RS08940 nicotinate-nucleotide diphosphorylase (carboxylating)
Pectobacterium carotovorum WPP14 0.27 HER17_RS21035 transcriptional regulator FtrA 0.48 HER17_RS03250 carboxylating nicotinate-nucleotide diphosphorylase low > 75
Azospirillum sp. SherDot2 0.26 MPMX19_01004 HTH-type transcriptional regulator CdhR 0.31 MPMX19_05672 putative nicotinate-nucleotide pyrophosphorylase [carboxylating]
Dechlorosoma suillum PS 0.24 Dsui_3428 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.51 Dsui_2901 nicotinate-nucleotide pyrophosphorylase
Escherichia coli ECOR38 0.24 HEPCGN_26900 ftrA transcriptional regulator FtrA 0.39 HEPCGN_08510 nadC carboxylating nicotinate-nucleotide diphosphorylase low > 87
Escherichia coli ECRC102 0.23 NIAGMN_25195 ftrA transcriptional regulator FtrA 0.39 NIAGMN_08380 nadC carboxylating nicotinate-nucleotide diphosphorylase
Pseudomonas syringae pv. syringae B728a 0.23 Psyr_2740 transcriptional regulator, AraC family with amidase-like domain protein 0.50 Psyr_0815 nicotinate-nucleotide pyrophosphorylase (carboxylating) low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.23 Psyr_2740 transcriptional regulator, AraC family with amidase-like domain protein 0.50 Psyr_0815 nicotinate-nucleotide pyrophosphorylase (carboxylating) low > 86
Escherichia coli ECRC99 0.23 KEDOAH_27380 ftrA transcriptional regulator FtrA 0.39 KEDOAH_17625 nadC carboxylating nicotinate-nucleotide diphosphorylase
Escherichia coli ECRC101 0.23 MCAODC_16875 ftrA transcriptional regulator FtrA 0.39 MCAODC_01045 nadC carboxylating nicotinate-nucleotide diphosphorylase low > 87
Escherichia coli ECRC98 0.23 JDDGAC_03560 ftrA transcriptional regulator FtrA 0.39 JDDGAC_14125 nadC carboxylating nicotinate-nucleotide diphosphorylase low > 86
Escherichia coli ECRC100 0.23 OKFHMN_01050 ftrA transcriptional regulator FtrA 0.39 OKFHMN_10530 nadC carboxylating nicotinate-nucleotide diphosphorylase
Bosea sp. OAE506 0.22 ABIE41_RS09540 transcriptional regulator FtrA 0.39 ABIE41_RS02500 carboxylating nicotinate-nucleotide diphosphorylase low > 77
Pedobacter sp. GW460-11-11-14-LB5 0.21 CA265_RS11405 AraC family transcriptional regulator 0.35 CA265_RS14530 nicotinate-nucleotide diphosphorylase (carboxylating) low > 88
Hydrogenophaga sp. GW460-11-11-14-LB1 0.21 GFF2648 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.50 GFF1217 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) low > 90
Shewanella sp. ANA-3 0.20 Shewana3_3975 transcriptional regulator (RefSeq) 0.37 Shewana3_0422 nicotinate-nucleotide pyrophosphorylase [carboxylating] (RefSeq)
Pontibacter actiniarum KMM 6156, DSM 19842 0.20 CA264_06675 AraC family transcriptional regulator 0.33 CA264_16940 nicotinate-nucleotide diphosphorylase (carboxylating)
Agrobacterium fabrum C58 0.19 Atu0264 transcriptional regulator, AraC family 0.34 Atu4096 nicotinate-nucleotide pyrophosphorylase 0.15 72
Shewanella amazonensis SB2B 0.19 Sama_3593 AraC family transcriptional regulator (RefSeq) 0.43 Sama_0371 nicotinate-nucleotide diphosphorylase (carboxylating) (RefSeq)
Mucilaginibacter yixingensis YX-36 DSM 26809 0.19 ABZR88_RS13765 GlxA family transcriptional regulator 0.35 ABZR88_RS15695 carboxylating nicotinate-nucleotide diphosphorylase
Phaeobacter inhibens DSM 17395 0.19 PGA1_c15870 transcriptional regulator, AraC family 0.24 PGA1_c27810 nicotinate-nucleotide pyrophosphorylase low > 62
Rhodospirillum rubrum S1H 0.18 Rru_A0758 Transcriptional Regulator, AraC family (NCBI) 0.33 Rru_A1432 Nicotinate-nucleotide pyrophosphorylase (NCBI) low > 58
Alteromonas macleodii MIT1002 0.17 MIT1002_02277 Carnitine catabolism transcriptional activator 0.40 MIT1002_03008 Nicotinate-nucleotide pyrophosphorylase [carboxylating]

Not shown: 1 genomes with orthologs for HSERO_RS12675 only; 51 genomes with orthologs for HSERO_RS11070 only