Conservation of cofitness between HSERO_RS03475 and HSERO_RS08405 in Herbaspirillum seropedicae SmR1

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS03475 NUDIX hydrolase 1.0 HSERO_RS08405 membrane protein 0.32 19
Acidovorax sp. GW101-3H11 0.60 Ac3H11_4361 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.47 Ac3H11_4775 Putative membrane protein low > 79
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS05740 NUDIX hydrolase 0.40 RALBFv3_RS03950 HlyC/CorC family transporter low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.59 GFF2602 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.25 GFF4625 Magnesium and cobalt efflux protein CorC low > 90
Ralstonia solanacearum PSI07 0.59 RPSI07_RS11560 NUDIX hydrolase 0.41 RPSI07_RS13270 HlyC/CorC family transporter low > 81
Ralstonia solanacearum UW163 0.59 UW163_RS07885 NUDIX hydrolase 0.40 UW163_RS09720 HlyC/CorC family transporter — —
Ralstonia solanacearum GMI1000 0.59 RS_RS13630 NUDIX hydrolase 0.41 RS_RS11430 HlyC/CorC family transporter low > 80
Variovorax sp. SCN45 0.58 GFF4911 Nudix-like NDP and NTP phosphohydrolase NudJ 0.47 GFF2520 UPF0053 inner membrane protein YtfL low > 127
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS01335 NUDIX hydrolase 0.42 ABZR87_RS15885 hemolysin family protein low > 80
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS17470 NUDIX hydrolase 0.42 RR42_RS04375 magnesium transporter low > 128
Variovorax sp. OAS795 0.55 ABID97_RS04420 NUDIX hydrolase 0.49 ABID97_RS07170 hemolysin family protein low > 91
Dechlorosoma suillum PS 0.52 Dsui_3338 Zn-finger containing NTP pyrophosphohydrolase 0.28 Dsui_3105 CBS domain-containing protein low > 51
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.2757.1 Nudix-like NDP and NTP phosphohydrolase YmfB 0.19 Xcc-8004.3156.1 Magnesium and cobalt efflux protein CorC low > 74
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS02190 NUDIX hydrolase 0.23 ABZR86_RS19900 hemolysin family protein low > 74
Lysobacter sp. OAE881 0.39 ABIE51_RS11505 NUDIX hydrolase 0.20 ABIE51_RS06575 hemolysin family protein low > 62
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_06880 Phosphatase NudJ 0.22 OKGIIK_02350 tlyC Hemolysin-related protein, contains CBS domains, UPF0053 family low > 52
Rhodanobacter denitrificans MT42 0.38 LRK55_RS00170 NUDIX hydrolase 0.21 LRK55_RS12675 hemolysin family protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.37 LRK54_RS00430 NUDIX hydrolase 0.21 LRK54_RS12975 hemolysin family protein low > 59
Acinetobacter radioresistens SK82 0.34 MPMX26_01049 Phosphatase NudJ 0.51 MPMX26_02321 hypothetical protein low > 36
Shewanella loihica PV-4 0.34 Shew_1561 NUDIX hydrolase (RefSeq) 0.52 Shew_0284 hypothetical protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.33 Sama_2061 MutT/nudix family protein (RefSeq) 0.51 Sama_3284 hemolysin, putative (RefSeq) low > 62
Rahnella sp. WP5 0.29 EX31_RS24580 NUDIX hydrolase 0.52 EX31_RS08705 HlyC/CorC family transporter low > 89
Shewanella sp. ANA-3 0.29 Shewana3_1748 NUDIX hydrolase (RefSeq) 0.54 Shewana3_0353 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.28 SO2631 MutT/nudix family protein (NCBI ptt file) 0.53 SO4351 CBS domain protein (NCBI ptt file) low > 76
Escherichia coli ECOR38 0.24 HEPCGN_24225 nudJ phosphatase NudJ 0.53 HEPCGN_10215 paeA Polyamine export protein low > 87
Escherichia coli ECRC102 0.24 NIAGMN_24895 nudJ phosphatase NudJ 0.53 NIAGMN_09865 paeA Polyamine export protein — —
Escherichia coli ECRC98 0.24 JDDGAC_06615 nudJ phosphatase NudJ 0.53 JDDGAC_15655 paeA Polyamine export protein low > 86
Escherichia coli ECRC62 0.24 BNILDI_19060 nudJ phosphatase NudJ 0.53 BNILDI_07240 tlyC Polyamine export protein low > 75
Escherichia fergusonii Becca 0.24 EFB2_02841 Phosphatase NudJ 0.53 EFB2_04311 hypothetical protein low > 86
Escherichia coli ECOR27 0.24 NOLOHH_20895 nudJ phosphatase NudJ 0.53 NOLOHH_04280 paeA Polyamine export protein low > 75
Escherichia coli ECRC99 0.24 KEDOAH_24835 nudJ phosphatase NudJ 0.53 KEDOAH_16140 paeA Polyamine export protein — —
Escherichia coli BL21 0.24 ECD_01132 bifunctional thiamine pyrimidine pyrophosphate hydrolase and thiamine pyrophosphate hydrolase 0.53 ECD_04089 UPF0053 family inner membrane protein — —
Escherichia coli Nissle 1917 0.24 ECOLIN_RS06630 phosphatase NudJ 0.53 ECOLIN_RS24495 hemolysin family protein — —
Escherichia coli BW25113 0.24 b1134 ymfB bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) 0.53 b4218 ytfL predicted inner membrane protein (NCBI) low > 76
Escherichia coli ECRC101 0.24 MCAODC_22335 nudJ phosphatase NudJ 0.53 MCAODC_02530 paeA Polyamine export protein low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_02534 Phosphatase NudJ 0.53 OHPLBJKB_03816 hypothetical protein low > 73
Escherichia coli ECRC100 0.24 OKFHMN_00750 nudJ phosphatase NudJ 0.53 OKFHMN_12015 paeA Polyamine export protein low > 80
Enterobacter sp. TBS_079 0.24 MPMX20_01818 Phosphatase NudJ 0.53 MPMX20_00495 hypothetical protein low > 85
Klebsiella michiganensis M5al 0.23 BWI76_RS11320 NUDIX hydrolase 0.52 BWI76_RS02765 membrane protein — —
Enterobacter asburiae PDN3 0.23 EX28DRAFT_1796 ADP-ribose pyrophosphatase 0.52 EX28DRAFT_3404 Hemolysins and related proteins containing CBS domains low > 76
Serratia liquefaciens MT49 0.23 IAI46_10445 NUDIX hydrolase 0.54 IAI46_01760 HlyC/CorC family transporter low > 86
Erwinia tracheiphila SCR3 0.23 LU632_RS14570 NUDIX hydrolase 0.51 LU632_RS02100 hemolysin family protein low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.22 GFF3419 Nudix-like NDP and NTP phosphohydrolase YmfB 0.52 GFF871 Putative membrane protein low > 78
Pectobacterium carotovorum WPP14 0.22 HER17_RS11620 NUDIX hydrolase 0.51 HER17_RS03970 hemolysin family protein low > 75
Dickeya dadantii 3937 0.22 DDA3937_RS11480 NUDIX hydrolase 0.52 DDA3937_RS17170 HlyC/CorC family transporter low > 74
Dickeya dianthicola 67-19 0.22 HGI48_RS11525 NUDIX hydrolase 0.52 HGI48_RS17225 HlyC/CorC family transporter low > 71
Dickeya dianthicola ME23 0.22 DZA65_RS11860 NUDIX hydrolase 0.52 DZA65_RS18310 HlyC/CorC family transporter low > 75
Pantoea sp. MT58 0.21 IAI47_11910 NUDIX hydrolase 0.51 IAI47_02710 HlyC/CorC family transporter low > 76

Not shown: 20 genomes with orthologs for HSERO_RS03475 only; 23 genomes with orthologs for HSERO_RS08405 only