| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Herbaspirillum seropedicae SmR1 | 1.0 | HSERO_RS00910 | | peptidase | 1.0 | HSERO_RS08280 | | leucine/isoleucine/valine transporter permease subunit | 0.48 | 8 |
| Cupriavidus basilensis FW507-4G11 | 0.83 | RR42_RS01060 | | peptidase | 0.73 | RR42_RS14415 | | leucine/isoleucine/valine transporter permease subunit | low | > 128 |
| Variovorax sp. OAS795 | 0.79 | ABID97_RS06180 | | ATP-dependent protease subunit HslV | 0.46 | ABID97_RS27575 | | high-affinity branched-chain amino acid ABC transporter permease LivM | low | > 91 |
| Castellaniella sp019104865 MT123 | 0.79 | ABCV34_RS13415 | | ATP-dependent protease subunit HslV | 0.60 | ABCV34_RS03625 | | high-affinity branched-chain amino acid ABC transporter permease LivM | low | > 48 |
| Marinobacter adhaerens HP15 | 0.70 | HP15_466 | | ATP-dependent protease peptidase subunit | 0.56 | HP15_3057 | | leucine/isoleucine/valine transporter permease subunit | low | > 73 |
| Dickeya dadantii 3937 | 0.69 | DDA3937_RS00920 | | ATP-dependent protease subunit HslV | 0.56 | DDA3937_RS00670 | | high-affinity branched-chain amino acid ABC transporter permease LivM | low | > 74 |
| Serratia liquefaciens MT49 | 0.69 | IAI46_24570 | | ATP-dependent protease subunit HslV | 0.56 | IAI46_00970 | | high-affinity branched-chain amino acid ABC transporter permease LivM | low | > 86 |
| Dickeya dianthicola ME23 | 0.69 | DZA65_RS21500 | | ATP-dependent protease subunit HslV | 0.56 | DZA65_RS21730 | | high-affinity branched-chain amino acid ABC transporter permease LivM | low | > 75 |
| Dickeya dianthicola 67-19 | 0.69 | HGI48_RS20455 | | ATP-dependent protease subunit HslV | 0.56 | HGI48_RS20720 | | high-affinity branched-chain amino acid ABC transporter permease LivM | 0.47 | 23 |
| Pectobacterium carotovorum WPP14 | 0.68 | HER17_RS00855 | | ATP-dependent protease subunit HslV | 0.55 | HER17_RS00505 | | high-affinity branched-chain amino acid ABC transporter permease LivM | low | > 75 |
| Rahnella sp. WP5 | 0.67 | EX31_RS14240 | | ATP-dependent protease subunit HslV | 0.59 | EX31_RS14795 | | high-affinity branched-chain amino acid ABC transporter permease LivM | low | > 89 |
| Erwinia tracheiphila SCR3 | 0.67 | LU632_RS19670 | hslV | ATP-dependent protease subunit HslV | 0.57 | LU632_RS19245 | | high-affinity branched-chain amino acid ABC transporter permease LivM | low | > 74 |
| Escherichia fergusonii Becca | 0.66 | EFB2_04686 | | ATP-dependent protease subunit HslV | 0.54 | EFB2_00366 | | hypothetical protein | low | > 86 |
| Escherichia coli ECRC102 | 0.66 | NIAGMN_11490 | hslV | ATP-dependent protease subunit HslV | 0.54 | NIAGMN_14520 | livM | branched chain amino acid ABC transporter permease LivM | — | — |
| Escherichia coli BW25113 | 0.66 | b3932 | hslV | ATP-dependent protease peptidase subunit (NCBI) | 0.54 | b3456 | livM | leucine/isoleucine/valine transporter subunit (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.66 | ECD_03817 | | peptidase component of the HslUV protease | 0.54 | ECD_03305 | | branched-chain amino acid ABC transporter permease | low | > 61 |
| Escherichia coli ECOR27 | 0.66 | NOLOHH_05880 | hslV | ATP-dependent protease subunit HslV | 0.53 | NOLOHH_08545 | livM | branched chain amino acid ABC transporter permease LivM | low | > 75 |
| Escherichia coli ECOR38 | 0.66 | HEPCGN_12380 | hslV | ATP-dependent protease subunit HslV | 0.54 | HEPCGN_15570 | livM | branched chain amino acid ABC transporter permease LivM | low | > 87 |
| Escherichia coli Nissle 1917 | 0.66 | ECOLIN_RS22640 | | ATP-dependent protease subunit HslV | 0.54 | ECOLIN_RS19765 | | branched chain amino acid ABC transporter permease LivM | low | > 55 |
| Escherichia coli ECRC101 | 0.66 | MCAODC_04235 | hslV | ATP-dependent protease subunit HslV | 0.54 | MCAODC_07280 | livM | branched chain amino acid ABC transporter permease LivM | low | > 87 |
| Escherichia coli ECRC99 | 0.66 | KEDOAH_14425 | hslV | ATP-dependent protease subunit HslV | 0.54 | KEDOAH_11390 | livM | branched chain amino acid ABC transporter permease LivM | — | — |
| Escherichia coli ECRC100 | 0.66 | OKFHMN_13735 | hslV | ATP-dependent protease subunit HslV | 0.54 | OKFHMN_16750 | livM | branched chain amino acid ABC transporter permease LivM | low | > 80 |
| Escherichia coli ECRC98 | 0.66 | JDDGAC_17360 | hslV | ATP-dependent protease subunit HslV | 0.54 | JDDGAC_20380 | livM | branched chain amino acid ABC transporter permease LivM | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.66 | OHPLBJKB_04119 | | ATP-dependent protease subunit HslV | 0.53 | OHPLBJKB_00247 | | hypothetical protein | low | > 73 |
| Pantoea sp. MT58 | 0.66 | IAI47_00850 | | ATP-dependent protease subunit HslV | 0.57 | IAI47_01575 | | high-affinity branched-chain amino acid ABC transporter permease LivM | low | > 76 |
| Escherichia coli ECRC62 | 0.66 | BNILDI_05650 | hslV | ATP-dependent protease subunit HslV | 0.54 | BNILDI_02960 | livM | branched chain amino acid ABC transporter permease LivM | low | > 75 |
| Enterobacter sp. TBS_079 | 0.66 | MPMX20_04537 | | ATP-dependent protease subunit HslV | 0.56 | MPMX20_04332 | | hypothetical protein | low | > 85 |
| Enterobacter asburiae PDN3 | 0.66 | EX28DRAFT_4405 | | ATP-dependent protease HslVU, peptidase subunit | 0.55 | EX28DRAFT_4288 | | ABC-type branched-chain amino acid transport system, permease component | low | > 76 |
| Pseudomonas fluorescens SBW25-INTG | 0.65 | PFLU_RS01965 | | ATP-dependent protease subunit HslV | 0.59 | PFLU_RS06635 | | high-affinity branched-chain amino acid ABC transporter permease LivM | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.65 | AO353_12430 | | ATP-dependent protease subunit HslV | 0.58 | AO353_17115 | | leucine/isoleucine/valine transporter permease subunit | — | — |
| Pseudomonas simiae WCS417 | 0.65 | PS417_01920 | | ATP-dependent protease subunit HslV | 0.58 | PS417_06605 | | leucine/isoleucine/valine transporter permease subunit | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.65 | PFLU_RS01965 | | ATP-dependent protease subunit HslV | 0.59 | PFLU_RS06635 | | high-affinity branched-chain amino acid ABC transporter permease LivM | low | > 109 |
| Klebsiella michiganensis M5al | 0.65 | BWI76_RS00755 | | ATP-dependent protease subunit HslV | 0.56 | BWI76_RS26340 | | branched-chain amino acid ABC transporter permease | low | > 92 |
| Pseudomonas fluorescens FW300-N1B4 | 0.64 | Pf1N1B4_1552 | | ATP-dependent protease HslV (EC 3.4.25.-) | 0.61 | Pf1N1B4_3216 | | Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.62 | DvMF_0485 | | ATP-dependent protease peptidase subunit (RefSeq) | 0.41 | DvMF_2609 | | inner-membrane translocator (RefSeq) | low | > 51 |
| Pseudomonas putida KT2440 | 0.61 | PP_5000 | | peptidase component of the ATP-dependent HslVU protease | 0.61 | PP_1139 | | branched chain amino acid transporter - permease subunit | low | > 96 |
| Pseudomonas sp. S08-1 | 0.61 | OH686_10095 | | ATP-dependent protease HslVU, peptidase subunit | 0.60 | OH686_04615 | | Branched-chain amino acid ABC transporter, permease protein LivM | low | > 80 |
| Pseudomonas syringae pv. syringae B728a | 0.61 | Psyr_0395 | | HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B | 0.60 | Psyr_3847 | | L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein / L-leucine ABC transporter membrane protein | low | > 86 |
| Sinorhizobium meliloti 1021 | 0.61 | SMc02575 | | ATP-dependent protease peptidase subunit | 0.41 | SMc01950 | | high-affinity branched-chain amino acid ABC transporter permease | low | > 103 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.61 | Psyr_0395 | | HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B | 0.60 | Psyr_3847 | | L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein / L-leucine ABC transporter membrane protein | low | > 86 |
| Rhodospirillum rubrum S1H | 0.60 | Rru_A3599 | | 20S proteasome, A and B subunits (NCBI) | 0.52 | Rru_A1750 | | inner-membrane translocator (NCBI) | low | > 58 |
| Pseudomonas sp. RS175 | 0.59 | PFR28_04999 | | ATP-dependent protease subunit HslV | 0.58 | PFR28_00538 | | hypothetical protein | — | — |
| Pseudomonas stutzeri RCH2 | 0.59 | Psest_3936 | | ATP-dependent protease HslVU, peptidase subunit | 0.61 | Psest_1310 | | ABC-type branched-chain amino acid transport system, permease component | low | > 67 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.59 | DVU1577 | hslV | ATP-dependent protease hslV (TIGR) | 0.41 | DVU0549 | | proline/arginine ABC transporter, permease component (from data) | low | > 55 |
| Azospirillum brasilense Sp245 | 0.59 | AZOBR_RS01655 | | peptidase | 0.48 | AZOBR_RS08240 | | L-proline and D-alanine ABC transporter, permease component 2 (from data) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.58 | AO356_09455 | | ATP-dependent protease subunit HslV | 0.61 | AO356_05330 | | leucine/isoleucine/valine transporter permease subunit | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.58 | Pf6N2E2_3769 | | ATP-dependent protease HslV (EC 3.4.25.-) | 0.61 | Pf6N2E2_2924 | | ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, permease component 2 LivM (from data) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.58 | PfGW456L13_289 | | ATP-dependent protease HslV (EC 3.4.25.-) | 0.60 | PfGW456L13_4609 | | Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) | — | — |
| Magnetospirillum magneticum AMB-1 | 0.57 | AMB_RS22950 | | HslU--HslV peptidase proteolytic subunit | 0.48 | AMB_RS09130 | | high-affinity branched-chain amino acid ABC transporter permease LivM | low | > 64 |
| Agrobacterium fabrum C58 | 0.56 | Atu0044 | | heat shock protein hslV | 0.40 | Atu2426 | | ABC transporter, membrane spanning protein (branched chain amino acid) | low | > 89 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.56 | GFF2314 | | ATP-dependent protease HslV (EC 3.4.25.-) | 0.55 | GFF550 | | Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) | low | > 78 |
Not shown: 37 genomes with orthologs for HSERO_RS00910 only; 0 genomes with orthologs for HSERO_RS08280 only