Conservation of cofitness between HSERO_RS16725 and HSERO_RS00795 in Herbaspirillum seropedicae SmR1

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS16725 ABC transporter permease 1.0 HSERO_RS00795 glycerol-3-phosphate dehydrogenase 0.25 11
Cupriavidus basilensis FW507-4G11 0.84 RR42_RS18600 ABC transporter permease 0.55 RR42_RS01845 glycerol-3-phosphate dehydrogenase low > 128
Sinorhizobium meliloti 1021 0.73 SM_b20659 sugar uptake ABC transporter permease 0.29 SMc03229 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase low > 103
Rhodopseudomonas palustris CGA009 0.67 TX73_017955 sugar ABC transporter permease 0.28 TX73_001320 NAD(P)-dependent glycerol-3-phosphate dehydrogenase low > 86
Bosea sp. OAE506 0.64 ABIE41_RS06425 sugar ABC transporter permease 0.27 ABIE41_RS05655 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase low > 77
Rhizobium sp. OAE497 0.29 ABIE40_RS21240 sugar ABC transporter permease 0.31 ABIE40_RS18055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase low > 107
Phaeobacter inhibens DSM 17395 0.29 PGA1_c16700 binding protein-dependent transport system, inner membrane component 0.33 PGA1_c35480 glycerol-3-phosphate dehydrogenase GpsA low > 62
Agrobacterium fabrum C58 0.29 Atu2603 ABC transporter, membrane spanning protein (maltose) 0.29 Atu2650 glycerol-3-phosphate dehydrogenase 0.14 53
Rahnella sp. WP5 0.27 EX31_RS07050 sugar ABC transporter permease 0.41 EX31_RS14340 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase low > 89
Synechococcus elongatus PCC 7942 0.27 Synpcc7942_0949 permease protein of sugar ABC transporter 0.28 Synpcc7942_2522 Glycerol-3-phosphate dehydrogenase (NAD(P)+) — —
Serratia liquefaciens MT49 0.27 IAI46_11765 sugar ABC transporter permease 0.39 IAI46_24690 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase low > 86
Pantoea sp. MT58 0.26 IAI47_20095 sugar ABC transporter permease 0.39 IAI47_00740 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase — —
Castellaniella sp019104865 MT123 0.26 ABCV34_RS07880 sugar ABC transporter permease 0.48 ABCV34_RS14250 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase low > 48
Paraburkholderia bryophila 376MFSha3.1 0.25 H281DRAFT_03746 carbohydrate ABC transporter membrane protein 1, CUT1 family 0.54 H281DRAFT_02000 glycerol-3-phosphate dehydrogenase (NAD(P)+) low > 103
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS15900 sugar ABC transporter permease 0.51 QEN71_RS01465 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase low > 153
Paraburkholderia graminis OAS925 0.24 ABIE53_004503 multiple sugar transport system permease protein 0.51 ABIE53_000667 glycerol-3-phosphate dehydrogenase (NAD(P)+) low > 113
Erwinia tracheiphila SCR3 0.24 LU632_RS00815 sugar ABC transporter permease 0.39 LU632_RS21875 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase low > 74
Burkholderia phytofirmans PsJN 0.24 BPHYT_RS35665 ABC transporter permease 0.49 BPHYT_RS02610 glycerol-3-phosphate dehydrogenase [NAD(P)+] low > 109
Azospirillum brasilense Sp245 0.23 AZOBR_RS25585 ABC transporter permease 0.36 AZOBR_RS00325 glycerol-3-phosphate dehydrogenase low > 97
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF4373 Maltose/maltodextrin ABC transporter, permease protein MalF 0.47 GFF1222 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) low > 90
Pseudomonas syringae pv. syringae B728a ΔmexB 0.22 Psyr_0761 carbohydrate ABC transporter membrane protein 1, CUT1 family 0.33 Psyr_2022 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.50 59
Pseudomonas syringae pv. syringae B728a 0.22 Psyr_0761 carbohydrate ABC transporter membrane protein 1, CUT1 family 0.33 Psyr_2022 Glycerol-3-phosphate dehydrogenase (NAD(P)+) — —
Variovorax sp. OAS795 0.21 ABID97_RS29290 sugar ABC transporter permease 0.48 ABID97_RS07405 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase low > 91
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_1647 Maltose/maltodextrin ABC transporter, permease protein MalF 0.32 Pf6N2E2_5875 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) — —
Bifidobacterium breve UCC2003 0.20 BBR_RS20185 sugar ABC transporter permease 0.22 BBR_RS12080 NAD(P)-dependent glycerol-3-phosphate dehydrogenase — —
Enterobacter asburiae PDN3 0.20 EX28DRAFT_0982 ABC-type sugar transport systems, permease components 0.39 EX28DRAFT_3859 Glycerol-3-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N2E3 0.19 AO353_25120 ABC transporter permease 0.33 AO353_01735 glycerol-3-phosphate dehydrogenase — —
Pectobacterium carotovorum WPP14 0.19 HER17_RS03520 sugar ABC transporter permease 0.39 HER17_RS20735 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase low > 75
Enterobacter sp. TBS_079 0.19 MPMX20_02466 Inner membrane ABC transporter permease protein YcjO 0.39 MPMX20_00125 Glycerol-3-phosphate dehydrogenase [NAD(P)+] — —
Escherichia coli Nissle 1917 0.19 ECOLIN_RS07885 sugar ABC transporter permease 0.40 ECOLIN_RS20595 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.19 OHPLBJKB_02371 Inner membrane ABC transporter permease protein YcjO 0.40 OHPLBJKB_00091 Glycerol-3-phosphate dehydrogenase [NAD(P)+] — —
Escherichia fergusonii Becca 0.19 EFB2_02616 Inner membrane ABC transporter permease protein YcjO 0.40 EFB2_00202 Glycerol-3-phosphate dehydrogenase [NAD(P)+] — —
Escherichia coli BL21 0.19 ECD_01288 putative sugar ABC transporter permease 0.40 ECD_03466 glycerol-3-phosphate dehydrogenase (NAD+) — —
Escherichia coli BW25113 0.18 b1311 ycjO predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) 0.40 b3608 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (NCBI) — —
Escherichia coli ECRC102 0.18 NIAGMN_26535 ugpA sugar ABC transporter permease 0.40 NIAGMN_13515 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N2C3 0.18 AO356_28575 ABC transporter permease 0.33 AO356_19795 glycerol-3-phosphate dehydrogenase low > 104
Escherichia coli ECRC100 0.18 OKFHMN_02365 ugpA sugar ABC transporter permease 0.40 OKFHMN_15755 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase — —
Escherichia coli ECRC99 0.18 KEDOAH_26410 ugpA sugar ABC transporter permease 0.40 KEDOAH_12395 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase — —
Escherichia coli ECRC98 0.18 JDDGAC_04910 ugpA sugar ABC transporter permease 0.40 JDDGAC_19380 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase — —
Escherichia coli ECRC101 0.18 MCAODC_15905 ugpA sugar ABC transporter permease 0.40 MCAODC_06265 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase — —
Escherichia coli ECOR27 0.18 NOLOHH_20060 ugpA sugar ABC transporter permease 0.40 NOLOHH_07635 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase — —
Escherichia coli ECOR38 0.18 HEPCGN_25825 ugpA sugar ABC transporter permease 0.40 HEPCGN_14595 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N1B4 0.17 Pf1N1B4_5113 sucrose ABC transporter, permease component 1 (from data) 0.30 Pf1N1B4_3518 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) low > 87

Not shown: 0 genomes with orthologs for HSERO_RS16725 only; 57 genomes with orthologs for HSERO_RS00795 only