Conservation of cofitness between HER17_RS10870 and HER17_RS21475 in Pectobacterium carotovorum WPP14

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS10870 HTH-type transcriptional regulator CysB 1.0 HER17_RS21475 thiol:disulfide interchange protein DsbA 0.94 14
Dickeya dadantii 3937 0.95 DDA3937_RS10540 HTH-type transcriptional regulator CysB 0.85 DDA3937_RS00100 thiol:disulfide interchange protein DsbA low > 74
Dickeya dianthicola 67-19 0.95 HGI48_RS10540 HTH-type transcriptional regulator CysB 0.84 HGI48_RS21265 thiol:disulfide interchange protein DsbA low > 71
Dickeya dianthicola ME23 0.95 DZA65_RS11020 HTH-type transcriptional regulator CysB 0.84 DZA65_RS22240 thiol:disulfide interchange protein DsbA low > 75
Serratia liquefaciens MT49 0.93 IAI46_13965 HTH-type transcriptional regulator CysB 0.86 IAI46_24995 thiol:disulfide interchange protein DsbA — —
Rahnella sp. WP5 0.93 EX31_RS09890 HTH-type transcriptional regulator CysB 0.78 EX31_RS15910 thiol:disulfide interchange protein DsbA low > 89
Klebsiella michiganensis M5al 0.92 BWI76_RS11930 LysR family transcriptional regulator CysB 0.76 BWI76_RS00345 protein disulfide oxidoreductase DsbA — —
Erwinia tracheiphila SCR3 0.92 LU632_RS12550 cysB HTH-type transcriptional regulator CysB 0.72 LU632_RS23875 dsbA thiol:disulfide interchange protein DsbA — —
Enterobacter sp. TBS_079 0.91 MPMX20_02501 HTH-type transcriptional regulator CysB 0.78 MPMX20_04603 Thiol:disulfide interchange protein DsbA — —
Escherichia coli ECOR38 0.91 HEPCGN_25600 cysB HTH-type transcriptional regulator CysB 0.72 HEPCGN_12805 dsbA thiol:disulfide interchange protein DsbA low > 87
Escherichia coli Nissle 1917 0.91 ECOLIN_RS07680 HTH-type transcriptional regulator CysB 0.72 ECOLIN_RS22250 thiol:disulfide interchange protein DsbA low > 55
Escherichia coli BL21 0.91 ECD_01251 N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor 0.72 ECD_03746 periplasmic protein disulfide isomerase I — —
Escherichia coli ECRC99 0.91 KEDOAH_26165 cysB HTH-type transcriptional regulator CysB 0.72 KEDOAH_13980 dsbA thiol:disulfide interchange protein DsbA — —
Escherichia coli BW25113 0.91 b1275 cysB DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding (NCBI) 0.72 b3860 dsbA periplasmic protein disulfide isomerase I (NCBI) — —
Escherichia coli ECRC98 0.91 JDDGAC_05145 cysB HTH-type transcriptional regulator CysB 0.72 JDDGAC_17795 dsbA thiol:disulfide interchange protein DsbA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2712 Cys regulon transcriptional activator CysB 0.78 GFF2213 Periplasmic thiol:disulfide interchange protein DsbA — —
Escherichia coli ECRC100 0.91 OKFHMN_02600 cysB HTH-type transcriptional regulator CysB 0.72 OKFHMN_14170 dsbA thiol:disulfide interchange protein DsbA — —
Escherichia coli ECRC62 0.91 BNILDI_18415 cysB HTH-type transcriptional regulator CysB 0.72 BNILDI_05230 dsbA thiol:disulfide interchange protein DsbA — —
Enterobacter asburiae PDN3 0.91 EX28DRAFT_0946 Transcriptional regulator 0.79 EX28DRAFT_4341 Protein-disulfide isomerase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.91 OHPLBJKB_02409 HTH-type transcriptional regulator CysB 0.72 OHPLBJKB_04193 Thiol:disulfide interchange protein DsbA low > 73
Escherichia fergusonii Becca 0.91 EFB2_02652 HTH-type transcriptional regulator CysB 0.72 EFB2_04757 Thiol:disulfide interchange protein DsbA — —
Escherichia coli ECOR27 0.91 NOLOHH_20265 cysB HTH-type transcriptional regulator CysB 0.72 NOLOHH_06300 dsbA thiol:disulfide interchange protein DsbA — —
Escherichia coli ECRC101 0.91 MCAODC_15665 cysB HTH-type transcriptional regulator CysB 0.72 MCAODC_04670 dsbA thiol:disulfide interchange protein DsbA — —
Escherichia coli ECRC102 0.91 NIAGMN_26770 cysB HTH-type transcriptional regulator CysB 0.72 NIAGMN_11925 dsbA thiol:disulfide interchange protein DsbA — —
Pantoea sp. MT58 0.90 IAI47_09240 HTH-type transcriptional regulator CysB 0.72 IAI47_00425 thiol:disulfide interchange protein DsbA — —
Vibrio cholerae E7946 ATCC 55056 0.80 CSW01_09545 HTH-type transcriptional regulator CysB 0.36 CSW01_00170 thiol:disulfide interchange protein DsbA — —
Alteromonas macleodii MIT1002 0.78 MIT1002_02005 Cys regulon transcriptional activator 0.27 MIT1002_00714 Thiol:disulfide interchange protein DsbA precursor — —
Shewanella amazonensis SB2B 0.75 Sama_1324 cysB transcriptional regulator CysB (RefSeq) 0.31 Sama_3321 thiol:disulfide interchange protein DsbA (RefSeq) — —
Shewanella oneidensis MR-1 0.75 SO2649 cysB cys regulon transcriptional activator (NCBI ptt file) 0.31 SO0333 dsbA thiol:disulfide interchange protein DsbA (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.75 Shew_1624 cysB transcriptional regulator CysB (RefSeq) 0.33 Shew_0265 DSBA oxidoreductase (RefSeq) — —
Shewanella sp. ANA-3 0.75 Shewana3_1731 cysB transcriptional regulator CysB (RefSeq) 0.32 Shewana3_3838 DSBA oxidoreductase (RefSeq) — —
Marinobacter adhaerens HP15 0.68 HP15_1854 transcriptional regulator, LysR family 0.19 HP15_3325 DSBA oxidoreductase — —
Pseudomonas simiae WCS417 0.68 PS417_08460 CysB family transcriptional regulator 0.21 PS417_00425 thiol:disulfide interchange protein — —
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_283 Cys regulon transcriptional activator CysB 0.19 Pf1N1B4_1879 Periplasmic thiol:disulfide interchange protein DsbA — —
Pseudomonas sp. S08-1 0.67 OH686_01730 Cys regulon transcriptional activator CysB 0.23 OH686_12195 Periplasmic thiol:disulfide interchange protein DsbA low > 80
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_2465 Cys regulon transcriptional activator CysB 0.19 Pf6N2E2_4158 Periplasmic thiol:disulfide interchange protein DsbA — —
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_19060 CysB family transcriptional regulator 0.21 AO353_10950 thiol:disulfide interchange protein low > 101
Pseudomonas fluorescens SBW25 0.67 PFLU_RS08410 HTH-type transcriptional regulator CysB 0.21 PFLU_RS00415 thiol:disulfide interchange protein DsbA/DsbL low > 109
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS08410 HTH-type transcriptional regulator CysB 0.21 PFLU_RS00415 thiol:disulfide interchange protein DsbA/DsbL low > 109
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_03180 CysB family transcriptional regulator 0.18 AO356_11445 thiol:disulfide interchange protein — —
Pseudomonas stutzeri RCH2 0.66 Psest_2329 Transcriptional regulator 0.19 Psest_0186 Protein-disulfide isomerase low > 67
Dechlorosoma suillum PS 0.52 Dsui_1988 transcriptional regulator 0.15 Dsui_0675 putative dithiol-disulfide isomerase involved in polyketide biosynthesis — —
Variovorax sp. SCN45 0.43 GFF244 Cys regulon transcriptional activator CysB 0.15 GFF6293 Periplasmic thiol:disulfide interchange protein DsbA low > 127
Variovorax sp. OAS795 0.43 ABID97_RS16600 CysB family HTH-type transcriptional regulator 0.15 ABID97_RS04765 thiol:disulfide interchange protein DsbA/DsbL low > 91
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_2455 Transcriptional regulator 0.23 B158DRAFT_0392 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis low > 40
Acidovorax sp. GW101-3H11 0.40 Ac3H11_2403 Alkanesulfonate utilization operon LysR-family regulator CbI 0.14 Ac3H11_724 Periplasmic thiol:disulfide interchange protein DsbA — —
Castellaniella sp019104865 MT123 0.40 ABCV34_RS08230 CysB family HTH-type transcriptional regulator 0.14 ABCV34_RS12390 thiol:disulfide interchange protein DsbA/DsbL low > 48
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.1249.1 Transcriptional regulator 0.16 Xcc-8004.969.1 Periplasmic thiol:disulfide interchange protein DsbA low > 74

Not shown: 12 genomes with orthologs for HER17_RS10870 only; 12 genomes with orthologs for HER17_RS21475 only