Conservation of cofitness between HER17_RS18005 and HER17_RS21070 in Pectobacterium carotovorum WPP14

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS18005 glycine cleavage system aminomethyltransferase GcvT 1.0 HER17_RS21070 sugar ABC transporter permease 0.66 1
Dickeya dadantii 3937 0.82 DDA3937_RS03245 glycine cleavage system aminomethyltransferase GcvT 0.83 DDA3937_RS20920 sugar ABC transporter permease low > 74
Dickeya dianthicola 67-19 0.82 HGI48_RS03390 glycine cleavage system aminomethyltransferase GcvT 0.83 HGI48_RS00325 sugar ABC transporter permease low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS03435 glycine cleavage system aminomethyltransferase GcvT 0.83 DZA65_RS00325 sugar ABC transporter permease low > 75
Serratia liquefaciens MT49 0.81 IAI46_20860 glycine cleavage system aminomethyltransferase GcvT 0.90 IAI46_00295 sugar ABC transporter permease low > 86
Rahnella sp. WP5 0.81 EX31_RS21510 glycine cleavage system aminomethyltransferase GcvT 0.84 EX31_RS09750 sugar ABC transporter permease low > 89
Enterobacter sp. TBS_079 0.78 MPMX20_03764 Aminomethyltransferase 0.81 MPMX20_00162 Xylose transport system permease protein XylH low > 85
Escherichia coli Nissle 1917 0.78 ECOLIN_RS16175 glycine cleavage system aminomethyltransferase GcvT 0.80 ECOLIN_RS20405 xylose ABC transporter permease XylH low > 55
Klebsiella michiganensis M5al 0.78 BWI76_RS23880 Aminomethyltransferase (EC 2.1.2.10) (from data) 0.82 BWI76_RS27040 xylose ABC transporter permease low > 92
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_00810 Aminomethyltransferase 0.80 OHPLBJKB_00136 Xylose transport system permease protein XylH low > 73
Escherichia coli BL21 0.78 ECD_02737 aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex 0.80 ECD_03420 D-xylose ABC transporter permease low > 61
Escherichia coli ECRC62 0.78 BNILDI_09970 gcvT glycine cleavage system aminomethyltransferase GcvT 0.79 BNILDI_03660 xylH xylose ABC transporter permease XylH low > 75
Escherichia coli BW25113 0.78 b2905 gcvT glycine cleavage system aminomethyltransferase T (NCBI) 0.80 b3568 xylH D-xylose transporter subunit (NCBI) low > 76
Escherichia coli ECOR27 0.78 NOLOHH_11435 gcvT glycine cleavage system aminomethyltransferase GcvT 0.80 NOLOHH_07885 xylH xylose ABC transporter permease XylH low > 75
Escherichia fergusonii Becca 0.77 EFB2_00997 Aminomethyltransferase 0.80 EFB2_00239 Xylose transport system permease protein XylH low > 86
Escherichia coli ECOR38 0.77 HEPCGN_18810 gcvT glycine cleavage system aminomethyltransferase GcvT 0.80 HEPCGN_14825 xylH xylose ABC transporter permease XylH low > 87
Enterobacter asburiae PDN3 0.77 EX28DRAFT_2957 glycine cleavage system T protein 0.83 EX28DRAFT_3833 ABC-type xylose transport system, permease component low > 76
Escherichia coli ECRC100 0.77 OKFHMN_19520 gcvT glycine cleavage system aminomethyltransferase GcvT 0.80 OKFHMN_15940 xylH xylose ABC transporter permease XylH low > 80
Escherichia coli ECRC99 0.77 KEDOAH_08620 gcvT glycine cleavage system aminomethyltransferase GcvT 0.80 KEDOAH_12210 xylH xylose ABC transporter permease XylH — —
Escherichia coli ECRC102 0.77 NIAGMN_17285 gcvT glycine cleavage system aminomethyltransferase GcvT 0.80 NIAGMN_13700 xylH xylose ABC transporter permease XylH — —
Escherichia coli ECRC101 0.77 MCAODC_10040 gcvT glycine cleavage system aminomethyltransferase GcvT 0.80 MCAODC_06455 xylH xylose ABC transporter permease XylH low > 87
Escherichia coli ECRC98 0.77 JDDGAC_23160 gcvT glycine cleavage system aminomethyltransferase GcvT 0.80 JDDGAC_19570 xylH xylose ABC transporter permease XylH low > 86
Pantoea sp. MT58 0.77 IAI47_03765 glycine cleavage system aminomethyltransferase GcvT 0.78 IAI47_00180 sugar ABC transporter permease low > 76
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_0246 aminomethyltransferase 0.45 Psyr_2886 xylose ABC transporter membrane protein low > 86
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_0246 aminomethyltransferase 0.45 Psyr_2886 xylose ABC transporter membrane protein low > 86
Pseudomonas simiae WCS417 0.53 PS417_27255 glycine cleavage system protein T 0.45 PS417_10930 D-xylose ABC transporter permease low > 88
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS28915 glycine cleavage system aminomethyltransferase GcvT 0.44 PFLU_RS11290 sugar ABC transporter permease low > 109
Pseudomonas fluorescens SBW25 0.53 PFLU_RS28915 glycine cleavage system aminomethyltransferase GcvT 0.44 PFLU_RS11290 sugar ABC transporter permease low > 109
Pseudomonas sp. RS175 0.53 PFR28_04316 Aminomethyltransferase 0.45 PFR28_02351 Xylose transport system permease protein XylH low > 88
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_4485 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.43 Pf6N2E2_1457 Xylose ABC transporter, permease protein XylH low > 103
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS18875 glycine cleavage system aminomethyltransferase GcvT 0.40 ABZR86_RS14410 sugar ABC transporter permease low > 74
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_13035 glycine cleavage system protein T 0.43 AO356_28515 sugar ABC transporter permease low > 104
Ralstonia solanacearum GMI1000 0.46 RS_RS16500 aminomethyltransferase 0.34 RS_RS24955 sugar ABC transporter permease low > 80
Ralstonia solanacearum UW163 0.46 UW163_RS04960 glycine cleavage system protein T 0.37 UW163_RS16745 sugar ABC transporter permease — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS08650 glycine cleavage system protein T 0.37 RALBFv3_RS23495 sugar ABC transporter permease — —
Ralstonia solanacearum PSI07 0.46 RPSI07_RS08585 glycine cleavage system protein T 0.34 RPSI07_RS07645 sugar ABC transporter permease low > 81
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS03925 glycine cleavage system aminomethyltransferase GcvT 0.47 ABZR87_RS18230 sugar ABC transporter permease low > 80
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_02411 aminomethyltransferase 0.47 H281DRAFT_03879 xylose ABC transporter membrane protein low > 103
Paraburkholderia graminis OAS925 0.45 ABIE53_000236 aminomethyltransferase 0.47 ABIE53_004932 D-xylose transport system permease protein low > 113
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS19320 glycine cleavage system protein T 0.46 BPHYT_RS32810 xylose ABC transporter permease low > 109
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS29205 glycine cleavage system aminomethyltransferase GcvT 0.48 QEN71_RS25860 sugar ABC transporter permease low > 153
Phaeobacter inhibens DSM 17395 0.25 PGA1_78p00290 aminomethyltransferase GcvT 0.28 PGA1_262p00440 glucose transporter, permease component (from data) — —
Sinorhizobium meliloti 1021 0.22 SMc02047 glycine cleavage system aminomethyltransferase T 0.31 SM_b20893 sugar uptake ABC transporter permease low > 103
Azospirillum sp. SherDot2 0.22 MPMX19_01029 Aminomethyltransferase 0.32 MPMX19_06226 Xylose transport system permease protein XylH low > 112
Rhizobium sp. OAE497 0.22 ABIE40_RS09940 glycine cleavage system aminomethyltransferase GcvT 0.33 ABIE40_RS13960 multiple monosaccharide ABC transporter permease low > 107
Dinoroseobacter shibae DFL-12 0.21 Dshi_2682 glycine cleavage system T protein (RefSeq) 0.29 Dshi_1999 inner-membrane translocator (RefSeq) low > 64
Agrobacterium fabrum C58 0.20 Atu1464 glycine cleavage system T protein, aminomethyltransferase 0.33 Atu2346 ABC transporter, membrane spanning protein (sugar) low > 89
Acidovorax sp. GW101-3H11 0.20 Ac3H11_165 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.34 Ac3H11_608 L-arabinose transport system permease protein (TC 3.A.1.2.2) low > 79
Azospirillum brasilense Sp245 0.20 AZOBR_RS10470 aminomethyltransferase 0.32 AZOBR_RS31250 ABC transporter permease low > 97
Variovorax sp. SCN45 0.19 GFF6476 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.32 GFF5196 L-arabinose ABC transporter, permease protein AraH low > 127

Not shown: 45 genomes with orthologs for HER17_RS18005 only; 2 genomes with orthologs for HER17_RS21070 only