Conservation of cofitness between HER17_RS14920 and HER17_RS20770 in Pectobacterium carotovorum WPP14

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS14920 ADP-forming succinate--CoA ligase subunit beta 1.0 HER17_RS20770 ADP-glyceromanno-heptose 6-epimerase 0.58 10
Dickeya dadantii 3937 0.93 DDA3937_RS06470 ADP-forming succinate--CoA ligase subunit beta 0.92 DDA3937_RS20440 ADP-glyceromanno-heptose 6-epimerase — —
Dickeya dianthicola 67-19 0.92 HGI48_RS06510 ADP-forming succinate--CoA ligase subunit beta 0.91 HGI48_RS00770 ADP-glyceromanno-heptose 6-epimerase — —
Dickeya dianthicola ME23 0.92 DZA65_RS06855 ADP-forming succinate--CoA ligase subunit beta 0.91 DZA65_RS00825 ADP-glyceromanno-heptose 6-epimerase — —
Serratia liquefaciens MT49 0.91 IAI46_06285 ADP-forming succinate--CoA ligase subunit beta 0.90 IAI46_24735 ADP-glyceromanno-heptose 6-epimerase — —
Pantoea sp. MT58 0.91 IAI47_13735 ADP-forming succinate--CoA ligase subunit beta 0.85 IAI47_00690 ADP-glyceromanno-heptose 6-epimerase — —
Erwinia tracheiphila SCR3 0.90 LU632_RS16085 sucC ADP-forming succinate--CoA ligase subunit beta 0.87 LU632_RS21915 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Klebsiella michiganensis M5al 0.90 BWI76_RS08425 succinyl-CoA ligase subunit beta 0.88 BWI76_RS27260 ADP-L-glycero-D-mannoheptose-6-epimerase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.90 OHPLBJKB_02989 Succinate--CoA ligase [ADP-forming] subunit beta 0.87 OHPLBJKB_00081 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Escherichia coli ECRC98 0.90 JDDGAC_10570 sucC ADP-forming succinate--CoA ligase subunit beta 0.86 JDDGAC_19325 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli ECRC102 0.90 NIAGMN_04965 sucC ADP-forming succinate--CoA ligase subunit beta 0.86 NIAGMN_13460 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli ECRC101 0.90 MCAODC_26135 sucC ADP-forming succinate--CoA ligase subunit beta 0.86 MCAODC_06210 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli Nissle 1917 0.90 ECOLIN_RS03880 ADP-forming succinate--CoA ligase subunit beta 0.87 ECOLIN_RS20645 ADP-glyceromanno-heptose 6-epimerase — —
Escherichia fergusonii Becca 0.90 EFB2_03378 Succinate--CoA ligase [ADP-forming] subunit beta 0.87 EFB2_00192 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Escherichia coli BW25113 0.90 b0728 sucC succinyl-CoA synthetase subunit beta (NCBI) 0.86 b3619 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) low > 76
Escherichia coli ECOR38 0.90 HEPCGN_01315 sucC ADP-forming succinate--CoA ligase subunit beta 0.87 HEPCGN_14545 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli BL21 0.90 ECD_00687 succinyl-CoA synthetase, beta subunit 0.86 ECD_03476 ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding — —
Escherichia coli ECRC99 0.90 KEDOAH_21050 sucC ADP-forming succinate--CoA ligase subunit beta 0.86 KEDOAH_12450 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli ECRC100 0.90 OKFHMN_06915 sucC ADP-forming succinate--CoA ligase subunit beta 0.86 OKFHMN_15700 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli ECRC62 0.90 BNILDI_21300 sucC ADP-forming succinate--CoA ligase subunit beta 0.86 BNILDI_03930 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli ECOR27 0.90 NOLOHH_23305 sucC ADP-forming succinate--CoA ligase subunit beta 0.86 NOLOHH_07580 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Rahnella sp. WP5 0.89 EX31_RS23450 ADP-forming succinate--CoA ligase subunit beta 0.91 EX31_RS14395 ADP-glyceromanno-heptose 6-epimerase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.89 GFF4641 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.86 GFF392 ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) low > 78
Enterobacter sp. TBS_079 0.88 MPMX20_01356 Succinate--CoA ligase [ADP-forming] subunit beta 0.87 MPMX20_00114 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Enterobacter asburiae PDN3 0.88 EX28DRAFT_2264 succinyl-CoA synthetase, beta subunit 0.87 EX28DRAFT_3871 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Vibrio cholerae E7946 ATCC 55056 0.77 CSW01_10420 succinyl-CoA ligase subunit beta 0.73 CSW01_01265 ADP-L-glycero-D-mannoheptose-6-epimerase low > 62
Shewanella loihica PV-4 0.75 Shew_1657 sucC succinyl-CoA synthetase subunit beta (RefSeq) 0.62 Shew_3694 ADP-L-glycero-D-manno-heptose-6-epimerase (RefSeq) low > 60
Azospirillum sp. SherDot2 0.55 MPMX19_00106 Succinate--CoA ligase [ADP-forming] subunit beta 0.36 MPMX19_01823 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Azospirillum brasilense Sp245 0.55 AZOBR_RS14065 malate--CoA ligase subunit beta 0.35 AZOBR_RS31160 ADP-L-glycero-D-manno-heptose-6-epimerase 0.35 91
Paraburkholderia sabiae LMG 24235 0.54 QEN71_RS20405 ADP-forming succinate--CoA ligase subunit beta 0.53 QEN71_RS04125 ADP-glyceromanno-heptose 6-epimerase — —
Caulobacter crescentus NA1000 0.54 CCNA_00340 succinyl-CoA synthetase beta chain 0.32 CCNA_01497 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_00340 succinyl-CoA synthetase beta chain 0.32 CCNA_01497 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS31375 succinyl-CoA synthetase subunit beta 0.51 RR42_RS04520 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Magnetospirillum magneticum AMB-1 0.54 AMB_RS20030 succinyl-CoA ligase subunit beta 0.33 AMB_RS03075 ADP-glyceromanno-heptose 6-epimerase — —
Rhodospirillum rubrum S1H 0.53 Rru_A1211 Succinyl-CoA synthetase, beta subunit (NCBI) 0.36 Rru_A3278 ADP-L-glycero-D-manno-heptose-6-epimerase (NCBI) — —
Rhodopseudomonas palustris CGA009 0.53 TX73_000990 ADP-forming succinate--CoA ligase subunit beta 0.35 TX73_020650 ADP-glyceromanno-heptose 6-epimerase — —
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_04205 succinyl-CoA synthetase (ADP-forming) beta subunit 0.55 H281DRAFT_03913 ADP-glyceromanno-heptose 6-epimerase precursor — —
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS16345 succinyl-CoA ligase [ADP-forming] subunit beta 0.54 BPHYT_RS14855 ADP-L-glycero-D-manno-heptose-6-epimerase low > 109
Paraburkholderia graminis OAS925 0.49 ABIE53_003445 succinyl-CoA synthetase beta subunit 0.54 ABIE53_003146 ADP-L-glycero-D-manno-heptose 6-epimerase low > 113
Ralstonia solanacearum GMI1000 0.48 RS_RS02775 succinyl-CoA ligase subunit beta 0.53 RS_RS04550 ADP-L-glycero-D-mannoheptose-6-epimerase low > 80
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS12025 ADP-forming succinate--CoA ligase subunit beta 0.53 RALBFv3_RS13815 ADP-glyceromanno-heptose 6-epimerase low > 76
Ralstonia solanacearum UW163 0.48 UW163_RS01610 ADP-forming succinate--CoA ligase subunit beta 0.53 UW163_RS15995 ADP-glyceromanno-heptose 6-epimerase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.48 A4249_RS14420 ADP-forming succinate--CoA ligase subunit beta 0.30 A4249_RS05625 ADP-glyceromanno-heptose 6-epimerase — —
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS07980 ADP-forming succinate--CoA ligase subunit beta 0.53 ABZR87_RS09505 ADP-glyceromanno-heptose 6-epimerase — —
Ralstonia solanacearum PSI07 0.48 RPSI07_RS21245 ADP-forming succinate--CoA ligase subunit beta 0.52 RPSI07_RS19655 ADP-glyceromanno-heptose 6-epimerase low > 81
Dechlorosoma suillum PS 0.47 Dsui_1445 succinyl-CoA synthetase, beta subunit 0.57 Dsui_1953 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Castellaniella sp019104865 MT123 0.47 ABCV34_RS04435 ADP-forming succinate--CoA ligase subunit beta 0.49 ABCV34_RS07065 ADP-glyceromanno-heptose 6-epimerase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.44 CA264_10470 succinate--CoA ligase subunit beta 0.31 CA264_01380 ADP-L-glycero-D-mannoheptose-6-epimerase — —
Methanococcus maripaludis JJ 0.29 MMJJ_RS08640 ADP-forming succinate--CoA ligase subunit beta 0.26 MMJJ_RS08755 ADP-glyceromanno-heptose 6-epimerase — —

Not shown: 47 genomes with orthologs for HER17_RS14920 only; 3 genomes with orthologs for HER17_RS20770 only