| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS10870 | | HTH-type transcriptional regulator CysB | 1.0 | HER17_RS20690 | | HTH-type transcriptional regulator MetR | 0.94 | 16 |
| Dickeya dadantii 3937 | 0.95 | DDA3937_RS10540 | | HTH-type transcriptional regulator CysB | 0.91 | DDA3937_RS20385 | | HTH-type transcriptional regulator MetR | low | > 74 |
| Dickeya dianthicola ME23 | 0.95 | DZA65_RS11020 | | HTH-type transcriptional regulator CysB | 0.91 | DZA65_RS00870 | | HTH-type transcriptional regulator MetR | 0.67 | 16 |
| Dickeya dianthicola 67-19 | 0.95 | HGI48_RS10540 | | HTH-type transcriptional regulator CysB | 0.91 | HGI48_RS00815 | | HTH-type transcriptional regulator MetR | low | > 71 |
| Serratia liquefaciens MT49 | 0.93 | IAI46_13965 | | HTH-type transcriptional regulator CysB | 0.88 | IAI46_01030 | | HTH-type transcriptional regulator MetR | — | — |
| Rahnella sp. WP5 | 0.93 | EX31_RS09890 | | HTH-type transcriptional regulator CysB | 0.92 | EX31_RS25370 | | HTH-type transcriptional regulator MetR | low | > 89 |
| Klebsiella michiganensis M5al | 0.92 | BWI76_RS11930 | | LysR family transcriptional regulator CysB | 0.81 | BWI76_RS01275 | | LysR family transcriptional regulator | — | — |
| Erwinia tracheiphila SCR3 | 0.92 | LU632_RS12550 | cysB | HTH-type transcriptional regulator CysB | 0.83 | LU632_RS24035 | metR | HTH-type transcriptional regulator MetR | — | — |
| Escherichia coli ECOR38 | 0.91 | HEPCGN_25600 | cysB | HTH-type transcriptional regulator CysB | 0.88 | HEPCGN_13030 | metR | HTH-type transcriptional regulator MetR | 0.83 | 8 |
| Enterobacter sp. TBS_079 | 0.91 | MPMX20_02501 | | HTH-type transcriptional regulator CysB | 0.87 | MPMX20_04452 | | HTH-type transcriptional regulator MetR | — | — |
| Escherichia coli ECRC101 | 0.91 | MCAODC_15665 | cysB | HTH-type transcriptional regulator CysB | 0.88 | MCAODC_04835 | metR | HTH-type transcriptional regulator MetR | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.91 | OHPLBJKB_02409 | | HTH-type transcriptional regulator CysB | 0.88 | OHPLBJKB_04223 | | HTH-type transcriptional regulator MetR | low | > 73 |
| Escherichia coli ECRC102 | 0.91 | NIAGMN_26770 | cysB | HTH-type transcriptional regulator CysB | 0.88 | NIAGMN_12085 | metR | HTH-type transcriptional regulator MetR | — | — |
| Escherichia coli Nissle 1917 | 0.91 | ECOLIN_RS07680 | | HTH-type transcriptional regulator CysB | 0.88 | ECOLIN_RS30005 | | HTH-type transcriptional regulator MetR | — | — |
| Escherichia coli ECRC62 | 0.91 | BNILDI_18415 | cysB | HTH-type transcriptional regulator CysB | 0.88 | BNILDI_05070 | metR | HTH-type transcriptional regulator MetR | — | — |
| Escherichia coli BL21 | 0.91 | ECD_01251 | | N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor | 0.88 | ECD_03707 | | methionine biosynthesis regulon transcriptional regulator | — | — |
| Escherichia coli ECRC99 | 0.91 | KEDOAH_26165 | cysB | HTH-type transcriptional regulator CysB | 0.88 | KEDOAH_13820 | metR | HTH-type transcriptional regulator MetR | — | — |
| Escherichia fergusonii Becca | 0.91 | EFB2_02652 | | HTH-type transcriptional regulator CysB | 0.88 | EFB2_04809 | | HTH-type transcriptional regulator MetR | — | — |
| Enterobacter asburiae PDN3 | 0.91 | EX28DRAFT_0946 | | Transcriptional regulator | 0.85 | EX28DRAFT_4493 | | Transcriptional regulator | — | — |
| Escherichia coli ECRC98 | 0.91 | JDDGAC_05145 | cysB | HTH-type transcriptional regulator CysB | 0.88 | JDDGAC_17955 | metR | HTH-type transcriptional regulator MetR | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.91 | GFF2712 | | Cys regulon transcriptional activator CysB | 0.85 | GFF253 | | Transcriptional activator MetR | — | — |
| Escherichia coli ECOR27 | 0.91 | NOLOHH_20265 | cysB | HTH-type transcriptional regulator CysB | 0.88 | NOLOHH_06460 | metR | HTH-type transcriptional regulator MetR | — | — |
| Escherichia coli ECRC100 | 0.91 | OKFHMN_02600 | cysB | HTH-type transcriptional regulator CysB | 0.88 | OKFHMN_14330 | metR | HTH-type transcriptional regulator MetR | — | — |
| Escherichia coli BW25113 | 0.91 | b1275 | cysB | DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding (NCBI) | 0.88 | b3828 | metR | DNA-binding transcriptional activator, homocysteine-binding (NCBI) | — | — |
| Pantoea sp. MT58 | 0.90 | IAI47_09240 | | HTH-type transcriptional regulator CysB | 0.85 | IAI47_18315 | | HTH-type transcriptional regulator MetR | low | > 76 |
| Vibrio cholerae E7946 ATCC 55056 | 0.80 | CSW01_09545 | | HTH-type transcriptional regulator CysB | 0.57 | CSW01_08580 | | HTH-type transcriptional regulator MetR | — | — |
| Alteromonas macleodii MIT1002 | 0.78 | MIT1002_02005 | | Cys regulon transcriptional activator | 0.29 | MIT1002_01119 | | HTH-type transcriptional regulator GltC | — | — |
| Shewanella amazonensis SB2B | 0.75 | Sama_1324 | cysB | transcriptional regulator CysB (RefSeq) | 0.37 | Sama_2628 | | transcriptional activator protein MetR (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.75 | SO2649 | cysB | cys regulon transcriptional activator (NCBI ptt file) | 0.38 | SO0817 | metR | transcriptional activator protein MetR (NCBI ptt file) | 0.83 | 30 |
| Shewanella sp. ANA-3 | 0.75 | Shewana3_1731 | cysB | transcriptional regulator CysB (RefSeq) | 0.38 | Shewana3_3470 | | LysR family transcriptional regulator (RefSeq) | — | — |
| Shewanella loihica PV-4 | 0.75 | Shew_1624 | cysB | transcriptional regulator CysB (RefSeq) | 0.35 | Shew_2987 | | LysR family transcriptional regulator (RefSeq) | — | — |
| Pseudomonas putida KT2440 | 0.68 | PP_2327 | | transcriptional dual regulator / CysB-O-acetyl-L-serine | 0.42 | PP_2696 | | DNA-binding transcriptional regulator, homocysteine-binding | low | > 96 |
| Marinobacter adhaerens HP15 | 0.68 | HP15_1854 | | transcriptional regulator, LysR family | 0.33 | HP15_458 | | transcriptional regulator, LysR family protein | — | — |
| Pseudomonas simiae WCS417 | 0.68 | PS417_08460 | | CysB family transcriptional regulator | 0.41 | PS417_05455 | | XRE family transcriptional regulator | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.68 | PfGW456L13_2230 | | Cys regulon transcriptional activator CysB | 0.41 | PfGW456L13_4778 | | Transcriptional activator MetR | low | > 87 |
| Pseudomonas sp. S08-1 | 0.67 | OH686_01730 | | Cys regulon transcriptional activator CysB | 0.42 | OH686_20465 | | Transcriptional activator MetR | low | > 80 |
| Pseudomonas fluorescens FW300-N1B4 | 0.67 | Pf1N1B4_283 | | Cys regulon transcriptional activator CysB | 0.40 | Pf1N1B4_784 | | Transcriptional activator MetR | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.67 | AO356_03180 | | CysB family transcriptional regulator | 0.42 | AO356_17735 | | XRE family transcriptional regulator | low | > 104 |
| Pseudomonas fluorescens FW300-N2E3 | 0.67 | AO353_19060 | | CysB family transcriptional regulator | 0.41 | AO353_16210 | | XRE family transcriptional regulator | 0.63 | 28 |
| Pseudomonas fluorescens FW300-N2E2 | 0.67 | Pf6N2E2_2465 | | Cys regulon transcriptional activator CysB | 0.42 | Pf6N2E2_5471 | | Transcriptional activator MetR | low | > 103 |
| Pseudomonas fluorescens SBW25 | 0.67 | PFLU_RS08410 | | HTH-type transcriptional regulator CysB | 0.41 | PFLU_RS05540 | | LysR family transcriptional regulator | 0.45 | 29 |
| Pseudomonas fluorescens SBW25-INTG | 0.67 | PFLU_RS08410 | | HTH-type transcriptional regulator CysB | 0.41 | PFLU_RS05540 | | LysR family transcriptional regulator | low | > 109 |
| Pseudomonas sp. RS175 | 0.67 | PFR28_00966 | | HTH-type transcriptional regulator CysB | 0.42 | PFR28_03478 | | HTH-type transcriptional regulator MetR | 0.49 | 19 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.66 | Psyr_2077 | | regulatory protein, LysR:LysR, substrate-binding protein | 0.41 | Psyr_3917 | | transcriptional regulator, LysR family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.66 | Psyr_2077 | | regulatory protein, LysR:LysR, substrate-binding protein | 0.41 | Psyr_3917 | | transcriptional regulator, LysR family | 0.55 | 69 |
| Pseudomonas stutzeri RCH2 | 0.66 | Psest_2329 | | Transcriptional regulator | 0.42 | Psest_1450 | | Transcriptional regulator | — | — |
| Variovorax sp. SCN45 | 0.43 | GFF244 | | Cys regulon transcriptional activator CysB | 0.33 | GFF796 | | Transcriptional activator MetR | low | > 127 |
| Variovorax sp. OAS795 | 0.43 | ABID97_RS16600 | | CysB family HTH-type transcriptional regulator | 0.34 | ABID97_RS19400 | | LysR family transcriptional regulator | — | — |
| Castellaniella sp019104865 MT123 | 0.40 | ABCV34_RS08230 | | CysB family HTH-type transcriptional regulator | 0.37 | ABCV34_RS04450 | | LysR substrate-binding domain-containing protein | low | > 48 |
| Acidovorax sp. GW101-3H11 | 0.40 | Ac3H11_2403 | | Alkanesulfonate utilization operon LysR-family regulator CbI | 0.35 | Ac3H11_2344 | | Transcriptional activator MetR | 0.69 | 17 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.30 | Xcc-8004.1249.1 | | Transcriptional regulator | 0.31 | Xcc-8004.400.1 | | Transcriptional activator MetR | 0.76 | 10 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.16 | ABZR88_RS05415 | | LysR substrate-binding domain-containing protein | 0.22 | ABZR88_RS03450 | | LysR family transcriptional regulator | low | > 71 |
Not shown: 8 genomes with orthologs for HER17_RS10870 only; 15 genomes with orthologs for HER17_RS20690 only