Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS00965 | | HTH-type transcriptional repressor FabR | 1.0 | HER17_RS17435 | | type II toxin-antitoxin system RatA family toxin | 0.86 | 16 |
Dickeya dianthicola ME23 | 0.93 | DZA65_RS21440 | | HTH-type transcriptional repressor FabR | 0.80 | DZA65_RS04220 | | type II toxin-antitoxin system RatA family toxin | low | > 75 |
Dickeya dianthicola 67-19 | 0.93 | HGI48_RS20395 | | HTH-type transcriptional repressor FabR | 0.80 | HGI48_RS04305 | | type II toxin-antitoxin system RatA family toxin | low | > 71 |
Dickeya dadantii 3937 | 0.93 | DDA3937_RS00980 | | HTH-type transcriptional repressor FabR | 0.82 | DDA3937_RS04310 | | type II toxin-antitoxin system RatA family toxin | low | > 74 |
Escherichia coli ECOR38 | 0.92 | HEPCGN_12200 | fabR | HTH-type transcriptional repressor FabR | 0.78 | HEPCGN_20250 | ratA | type II toxin-antitoxin system toxin RatA | low | > 87 |
Escherichia coli BL21 | 0.92 | ECD_03848 | | transcriptional repressor of fabA and fabB | 0.78 | ECD_02507 | | toxic UPF0083 family protein inhibitor of 70S ribosome formation | low | > 61 |
Escherichia fergusonii Becca | 0.92 | EFB2_04647 | | HTH-type transcriptional repressor FabR | 0.79 | EFB2_01274 | | Persistence and stress-resistance toxin PasT | low | > 86 |
Escherichia coli ECRC101 | 0.92 | MCAODC_04045 | fabR | HTH-type transcriptional repressor FabR | 0.78 | MCAODC_11655 | ratA | type II toxin-antitoxin system toxin RatA | — | — |
Enterobacter sp. TBS_079 | 0.92 | MPMX20_04517 | | HTH-type transcriptional repressor FabR | 0.77 | MPMX20_03489 | | Persistence and stress-resistance toxin PasT | — | — |
Escherichia coli ECRC62 | 0.92 | BNILDI_05835 | fabR | HTH-type transcriptional repressor FabR | 0.78 | BNILDI_11605 | ratA | type II toxin-antitoxin system toxin RatA | — | — |
Escherichia coli ECRC99 | 0.92 | KEDOAH_14615 | fabR | HTH-type transcriptional repressor FabR | 0.78 | KEDOAH_07090 | ratA | type II toxin-antitoxin system toxin RatA | — | — |
Escherichia coli ECRC100 | 0.92 | OKFHMN_13545 | fabR | HTH-type transcriptional repressor FabR | 0.78 | OKFHMN_21130 | ratA | type II toxin-antitoxin system toxin RatA | — | — |
Escherichia coli Nissle 1917 | 0.92 | ECOLIN_RS22890 | | HTH-type transcriptional repressor FabR | 0.78 | ECOLIN_RS14790 | | type II toxin-antitoxin system toxin RatA | low | > 55 |
Enterobacter asburiae PDN3 | 0.92 | EX28DRAFT_4426 | | transcriptional regulator, TetR family | 0.77 | EX28DRAFT_2722 | | Oligoketide cyclase/lipid transport protein | — | — |
Escherichia coli ECRC102 | 0.92 | NIAGMN_11295 | fabR | HTH-type transcriptional repressor FabR | 0.78 | NIAGMN_18900 | ratA | type II toxin-antitoxin system toxin RatA | — | — |
Escherichia coli ECRC98 | 0.92 | JDDGAC_17170 | fabR | HTH-type transcriptional repressor FabR | 0.78 | JDDGAC_24795 | ratA | type II toxin-antitoxin system toxin RatA | — | — |
Escherichia coli BW25113 | 0.92 | b3963 | fabR | DNA-binding transcriptional repressor (RefSeq) | 0.78 | b2619 | yfjG | hypothetical protein (NCBI) | — | — |
Escherichia coli ECOR27 | 0.92 | NOLOHH_05690 | fabR | HTH-type transcriptional repressor FabR | 0.78 | NOLOHH_12800 | ratA | type II toxin-antitoxin system toxin RatA | — | — |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.92 | OHPLBJKB_04087 | | HTH-type transcriptional repressor FabR | 0.78 | OHPLBJKB_01088 | | Ribosome association toxin RatA | — | — |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.91 | GFF2349 | | Unsaturated fatty acid biosythesis repressor FabR, TetR family | 0.66 | GFF4159 | | Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W | — | — |
Klebsiella michiganensis M5al | 0.91 | BWI76_RS00875 | | DNA-binding transcriptional regulator FabR | 0.75 | BWI76_RS21575 | | hypothetical protein | — | — |
Serratia liquefaciens MT49 | 0.91 | IAI46_24465 | | HTH-type transcriptional repressor FabR | 0.83 | IAI46_19650 | | type II toxin-antitoxin system RatA family toxin | — | — |
Rahnella sp. WP5 | 0.90 | EX31_RS14160 | | HTH-type transcriptional repressor FabR | 0.76 | EX31_RS21745 | | type II toxin-antitoxin system RatA family toxin | — | — |
Pantoea sp. MT58 | 0.90 | IAI47_00940 | | HTH-type transcriptional repressor FabR | 0.75 | IAI47_04795 | | type II toxin-antitoxin system RatA family toxin | — | — |
Erwinia tracheiphila SCR3 | 0.90 | LU632_RS19580 | fabR | HTH-type transcriptional repressor FabR | 0.74 | LU632_RS17020 | | type II toxin-antitoxin system RatA family toxin | low | > 74 |
Vibrio cholerae E7946 ATCC 55056 | 0.71 | CSW01_00775 | | HTH-type transcriptional repressor FabR | 0.64 | CSW01_04380 | | ubiquinone-binding protein | — | — |
Shewanella amazonensis SB2B | 0.65 | Sama_0192 | | DNA-binding transcriptional repressor FabR (RefSeq) | 0.60 | Sama_2387 | | hypothetical protein (RefSeq) | — | — |
Shewanella loihica PV-4 | 0.65 | Shew_0137 | | DNA-binding transcriptional repressor FabR (RefSeq) | 0.59 | Shew_1269 | | cyclase/dehydrase (RefSeq) | — | — |
Shewanella sp. ANA-3 | 0.65 | Shewana3_0178 | | DNA-binding transcriptional repressor FabR (RefSeq) | 0.58 | Shewana3_2951 | | cyclase/dehydrase (RefSeq) | — | — |
Shewanella oneidensis MR-1 | 0.65 | SO0198 | | transcriptional regulator, TetR family (NCBI ptt file) | 0.57 | SO1474 | | conserved hypothetical protein (NCBI ptt file) | — | — |
Kangiella aquimarina DSM 16071 | 0.60 | B158DRAFT_1831 | | transcriptional regulator, TetR family | 0.49 | B158DRAFT_0970 | | Oligoketide cyclase/lipid transport protein | — | — |
Marinobacter adhaerens HP15 | 0.56 | HP15_2045 | | DNA-binding transcriptional repressor FabR | 0.46 | HP15_3088 | | oligoketide cyclase/lipid transport protein | low | > 73 |
Alteromonas macleodii MIT1002 | 0.55 | MIT1002_03371 | | HTH-type transcriptional repressor FabR | 0.58 | MIT1002_01807 | | Toxin RatA | — | — |
Xanthomonas campestris pv. campestris strain 8004 | 0.32 | Xcc-8004.4923.1 | | Unsaturated fatty acid biosythesis repressor FabR, TetR family | 0.34 | Xcc-8004.3436.1 | | hypothetical protein | — | — |
Pseudomonas sp. S08-1 | 0.31 | OH686_16690 | | Transcriptional regulator, AcrR family | 0.45 | OH686_17030 | | Ribosome association toxin RatA | — | — |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.29 | Psyr_4450 | | transcriptional regulator, TetR family | 0.45 | Psyr_4201 | | cyclase/dehydrase | — | — |
Pseudomonas syringae pv. syringae B728a | 0.29 | Psyr_4450 | | transcriptional regulator, TetR family | 0.45 | Psyr_4201 | | cyclase/dehydrase | — | — |
Pseudomonas fluorescens GW456-L13 | 0.28 | PfGW456L13_110 | | Unsaturated fatty acid biosythesis repressor FabR, TetR family | 0.46 | PfGW456L13_5110 | | Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W | — | — |
Lysobacter sp. OAE881 | 0.28 | ABIE51_RS00935 | | HTH-type transcriptional repressor FabR | 0.35 | ABIE51_RS11675 | | type II toxin-antitoxin system RatA family toxin | low | > 62 |
Pseudomonas fluorescens FW300-N1B4 | 0.28 | Pf1N1B4_1370 | | Unsaturated fatty acid biosythesis repressor FabR, TetR family | 0.45 | Pf1N1B4_1182 | | Putative oligoketide cyclase/dehydratase or lipid transport protein YfjG | — | — |
Pseudomonas fluorescens FW300-N2E3 | 0.27 | AO353_13415 | | TetR family transcriptional regulator | 0.44 | AO353_05680 | | ribosome association toxin RatA | — | — |
Pseudomonas sp. RS175 | 0.27 | PFR28_05164 | | HTH-type transcriptional repressor FabR | 0.47 | PFR28_00067 | | Ribosome association toxin RatA | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.27 | AO356_08445 | | TetR family transcriptional regulator | 0.48 | AO356_07530 | | ribosome association toxin RatA | — | — |
Pseudomonas fluorescens FW300-N2E2 | 0.27 | Pf6N2E2_3568 | | Unsaturated fatty acid biosythesis repressor FabR, TetR family | 0.47 | Pf6N2E2_3375 | | Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W | — | — |
Pseudomonas simiae WCS417 | 0.27 | PS417_02720 | | TetR family transcriptional regulator | 0.44 | PS417_24090 | | ribosome association toxin RatA | — | — |
Pseudomonas fluorescens SBW25 | 0.26 | PFLU_RS02790 | | TetR family transcriptional regulator | 0.43 | PFLU_RS25930 | | type II toxin-antitoxin system RatA family toxin | — | — |
Pseudomonas fluorescens SBW25-INTG | 0.26 | PFLU_RS02790 | | TetR family transcriptional regulator | 0.43 | PFLU_RS25930 | | type II toxin-antitoxin system RatA family toxin | — | — |
Paraburkholderia graminis OAS925 | 0.22 | ABIE53_002363 | | AcrR family transcriptional regulator | 0.45 | ABIE53_002481 | | ribosome-associated toxin RatA of RatAB toxin-antitoxin module | — | — |
Burkholderia phytofirmans PsJN | 0.21 | BPHYT_RS11410 | | TetR family transcriptional regulator | 0.45 | BPHYT_RS12035 | | cyclase | — | — |
Not shown: 2 genomes with orthologs for HER17_RS00965 only; 35 genomes with orthologs for HER17_RS17435 only