Conservation of cofitness between HER17_RS19160 and HER17_RS17395 in Pectobacterium carotovorum WPP14

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS19160 TIGR00645 family protein 1.0 HER17_RS17395 MFS transporter 0.48 20
Klebsiella michiganensis M5al 0.83 BWI76_RS24270 membrane protein 0.22 BWI76_RS15050 sugar transporter low > 92
Enterobacter sp. TBS_079 0.83 MPMX20_03846 hypothetical protein 0.12 MPMX20_03124 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.83 EX28DRAFT_3040 TIGR00645 family protein 0.10 EX28DRAFT_0403 Protein of unknown function (DUF1228) low > 76
Pantoea sp. MT58 0.81 IAI47_01255 TIGR00645 family protein 0.11 IAI47_06715 YbfB/YjiJ family MFS transporter low > 76
Serratia liquefaciens MT49 0.81 IAI46_12210 TIGR00645 family protein 0.13 IAI46_07895 YbfB/YjiJ family MFS transporter low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.81 GFF3112 Putative membrane protein 0.49 GFF988 Putative transport protein low > 78
Escherichia coli Nissle 1917 0.80 ECOLIN_RS17290 TIGR00645 family protein 0.51 ECOLIN_RS24895 MFS transporter low > 55
Escherichia coli ECRC100 0.80 OKFHMN_18985 yqhA UPF0114 protein YqhA 0.50 OKFHMN_11500 MFS transporter low > 80
Escherichia coli ECRC99 0.80 KEDOAH_09160 yqhA UPF0114 protein YqhA 0.50 KEDOAH_16645 MFS transporter — —
Escherichia coli BL21 0.80 ECD_02877 UPF0114 family putative inner membrane protein 0.51 ECD_04201 DUF1228 family putative inner membrane MFS superfamily transporter low > 61
Escherichia coli ECRC101 0.80 MCAODC_09500 yqhA UPF0114 protein YqhA 0.50 MCAODC_02015 MFS transporter low > 87
Escherichia coli ECRC62 0.80 BNILDI_00755 yqhA UPF0114 protein YqhA 0.52 BNILDI_07760 yjiJ Uncharacterized protein YjiJ low > 75
Escherichia coli BW25113 0.80 b3002 yqhA hypothetical protein (NCBI) 0.51 b4332 yjiJ predicted inner membrane protein (NCBI) low > 76
Escherichia coli ECOR27 0.80 NOLOHH_10760 yqhA UPF0114 protein YqhA 0.52 NOLOHH_03835 yjiJ Uncharacterized protein YjiJ low > 75
Escherichia coli ECRC98 0.80 JDDGAC_22620 yqhA UPF0114 protein YqhA 0.50 JDDGAC_15095 MFS transporter low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.80 OHPLBJKB_00697 hypothetical protein 0.52 OHPLBJKB_03734 hypothetical protein low > 73
Escherichia fergusonii Becca 0.80 EFB2_00806 hypothetical protein 0.51 EFB2_04112 hypothetical protein low > 86
Escherichia coli ECRC102 0.80 NIAGMN_16750 yqhA UPF0114 protein YqhA 0.50 NIAGMN_09350 MFS transporter — —
Pseudomonas sp. S08-1 0.74 OH686_16270 Putative inner membrane protein 0.19 OH686_10485 Uncharacterized MFS-type transporter low > 80
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_14070 hypothetical protein 0.10 AO353_18380 hypothetical protein low > 101
Pseudomonas stutzeri RCH2 0.72 Psest_3394 TIGR00645 family protein 0.11 Psest_1228 Arabinose efflux permease low > 67
Pseudomonas sp. RS175 0.72 PFR28_03777 hypothetical protein 0.11 PFR28_00772 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_5095 Putative inner membrane protein (Fragment) 0.11 Pf6N2E2_2661 Possible MFS Superfamily transporter precursor low > 103
Pseudomonas putida KT2440 0.72 PP_0682 conserved inner membrane protein of unknown function, UPF0114 family 0.13 PP_4526 putative MFS superfamily transporter precursor low > 96
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_15775 hypothetical protein 0.11 AO356_04120 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_2791 Putative inner membrane protein (Fragment) 0.12 Pf1N1B4_533 Possible MFS Superfamily transporter precursor low > 87
Pseudomonas simiae WCS417 0.70 PS417_24215 hypothetical protein 0.09 PS417_20210 membrane protein — —
Pseudomonas fluorescens SBW25-INTG 0.70 PFLU_RS26135 TIGR00645 family protein 0.10 PFLU_RS22150 MFS transporter low > 109
Pseudomonas fluorescens SBW25 0.70 PFLU_RS26135 TIGR00645 family protein 0.10 PFLU_RS22150 MFS transporter low > 109
Azospirillum sp. SherDot2 0.52 MPMX19_01767 hypothetical protein 0.15 MPMX19_02319 hypothetical protein low > 112
Azospirillum brasilense Sp245 0.50 AZOBR_RS06580 hypothetical protein 0.15 AZOBR_RS00955 MFS transporter low > 97
Agrobacterium fabrum C58 0.47 Atu2286 hypothetical protein 0.13 Atu2305 MFS permease low > 89
Rhodospirillum rubrum S1H 0.46 Rru_A3669 Uncharacterized protein UPF0114 (NCBI) 0.23 Rru_A1651 hypothetical protein (NCBI) low > 58
Rhizobium sp. OAE497 0.44 ABIE40_RS13435 TIGR00645 family protein 0.13 ABIE40_RS13640 YbfB/YjiJ family MFS transporter low > 107
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS23775 TIGR00645 family protein 0.11 QEN71_RS04995 YbfB/YjiJ family MFS transporter low > 153
Rhodopseudomonas palustris CGA009 0.39 TX73_001195 TIGR00645 family protein 0.08 TX73_001170 YbfB/YjiJ family MFS transporter low > 86
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS06990 membrane protein 0.14 BPHYT_RS13970 MFS transporter low > 109
Paraburkholderia graminis OAS925 0.38 ABIE53_001663 uncharacterized protein (TIGR00645 family) 0.13 ABIE53_002961 MFS family permease low > 113
Ralstonia solanacearum GMI1000 0.38 RS_RS09825 membrane protein 0.13 RS_RS04045 MFS transporter low > 80
Paraburkholderia bryophila 376MFSha3.1 0.38 H281DRAFT_04955 TIGR00645 family protein 0.09 H281DRAFT_03758 Predicted arabinose efflux permease, MFS family — —
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS02455 membrane protein 0.15 RALBFv3_RS13250 MFS transporter low > 76
Ralstonia solanacearum UW163 0.38 UW163_RS11270 membrane protein 0.15 UW163_RS00320 MFS transporter — —
Ralstonia solanacearum PSI07 0.38 RPSI07_RS14870 membrane protein 0.14 RPSI07_RS19970 MFS transporter low > 81
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS14370 TIGR00645 family protein 0.14 ABZR87_RS09330 YbfB/YjiJ family MFS transporter low > 80
Variovorax sp. OAS795 0.34 ABID97_RS17530 YqhA family protein 0.16 ABID97_RS16500 YbfB/YjiJ family MFS transporter low > 91
Variovorax sp. SCN45 0.34 GFF476 InterPro IPR005134 COGs COG2862 0.27 GFF1659 Uncharacterized MFS-type transporter low > 127
Acidovorax sp. GW101-3H11 0.33 Ac3H11_950 putative membrane protein 0.13 Ac3H11_3362 Transporter, MFS superfamily low > 79
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS07765 membrane protein 0.16 HSERO_RS19625 MFS transporter low > 78

Not shown: 19 genomes with orthologs for HER17_RS19160 only; 4 genomes with orthologs for HER17_RS17395 only