Conservation of cofitness between HER17_RS12930 and HER17_RS15645 in Pectobacterium carotovorum WPP14

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12930 microcin C ABC transporter permease 1.0 HER17_RS15645 GTPase 0.52 20
Dickeya dianthicola 67-19 0.87 HGI48_RS09220 ABC transporter permease subunit 0.62 HGI48_RS16450 GTPase low > 71
Dickeya dadantii 3937 0.87 DDA3937_RS09180 ABC transporter permease subunit 0.64 DDA3937_RS16350 GTPase low > 74
Dickeya dianthicola ME23 0.85 DZA65_RS09525 ABC transporter permease subunit 0.63 DZA65_RS17535 GTPase low > 75
Serratia liquefaciens MT49 0.79 IAI46_17325 ABC transporter permease subunit 0.72 IAI46_02540 GTPase low > 86
Escherichia coli BW25113 0.76 b2179 yejE predicted oligopeptide transporter subunit (NCBI) 0.65 b4352 yjiA orf, hypothetical protein (VIMSS) low > 76
Escherichia coli Nissle 1917 0.76 ECOLIN_RS12740 ABC transporter permease 0.65 ECOLIN_RS24980 GTPase
Escherichia coli ECRC62 0.76 BNILDI_13875 yejE Inner membrane ABC transporter permease protein YejE 0.65 BNILDI_07825 yjiA GTPase low > 75
Escherichia coli BL21 0.76 ECD_02109 microcin C ABC transporter permease 0.65 ECD_04218 metal-binding GTPase low > 61
Escherichia fergusonii Becca 0.76 EFB2_01677 Inner membrane ABC transporter permease protein YejE 0.64 EFB2_04096 P-loop guanosine triphosphatase YjiA low > 86
Escherichia coli ECOR27 0.76 NOLOHH_14955 yejE Inner membrane ABC transporter permease protein YejE 0.64 NOLOHH_03775 yjiA GTPase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.76 GFF3757 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.64 GFF1006 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_01530 Inner membrane ABC transporter permease protein YejE 0.65 OHPLBJKB_03722 putative GTP-binding protein YjiA low > 73
Escherichia coli ECRC102 0.76 NIAGMN_21145 yejE Inner membrane ABC transporter permease protein YejE 0.65 NIAGMN_09245 yjiA GTPase
Escherichia coli ECRC100 0.76 OKFHMN_23380 yejE Inner membrane ABC transporter permease protein YejE 0.65 OKFHMN_11395 yjiA GTPase low > 80
Escherichia coli ECRC99 0.76 KEDOAH_04805 yejE Inner membrane ABC transporter permease protein YejE 0.65 KEDOAH_16750 yjiA GTPase
Escherichia coli ECRC101 0.76 MCAODC_14430 yejE Inner membrane ABC transporter permease protein YejE 0.65 MCAODC_01910 yjiA GTPase low > 87
Escherichia coli ECRC98 0.76 JDDGAC_27340 yejE Inner membrane ABC transporter permease protein YejE 0.65 JDDGAC_14990 yjiA GTPase low > 86
Escherichia coli ECOR38 0.76 HEPCGN_22645 yejE Inner membrane ABC transporter permease protein YejE 0.64 HEPCGN_09435 yjiA GTPase low > 87
Klebsiella michiganensis M5al 0.75 BWI76_RS19790 putative binding-protein-dependent transporter 0.64 BWI76_RS03810 GTPase low > 92
Enterobacter sp. TBS_079 0.74 MPMX20_03145 Inner membrane ABC transporter permease protein YejE 0.65 MPMX20_00629 P-loop guanosine triphosphatase YjiA low > 85
Enterobacter asburiae PDN3 0.74 EX28DRAFT_0382 ABC-type uncharacterized transport system, permease component 0.65 EX28DRAFT_3534 Putative GTPases (G3E family) low > 76
Rahnella sp. WP5 0.73 EX31_RS19140 ABC transporter permease subunit 0.66 EX31_RS00785 GTPase low > 89
Pseudomonas sp. S08-1 0.65 OH686_03610 ABC transporter, permease protein 2 0.52 OH686_16220 Metal-binding GTPase YjiA low > 80
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_1756 Binding-protein-dependent transport systems inner membrane component 0.48 Psyr_4271 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_1756 Binding-protein-dependent transport systems inner membrane component 0.48 Psyr_4271 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K low > 86
Rhodospirillum rubrum S1H 0.63 Rru_A3168 Binding-protein-dependent transport systems inner membrane component (NCBI) 0.24 Rru_A1611 Cobalamin synthesis protein/P47K (NCBI) low > 58
Pseudomonas sp. RS175 0.63 PFR28_01547 Inner membrane ABC transporter permease protein YejE 0.49 PFR28_03788 P-loop guanosine triphosphatase YjiA low > 88
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS12885 ABC transporter permease 0.49 PFLU_RS26200 GTPase low > 109
Pseudomonas fluorescens SBW25 0.63 PFLU_RS12885 ABC transporter permease 0.49 PFLU_RS26200 GTPase low > 109
Pseudomonas putida KT2440 0.62 PP_4149 putative inner membrane ABC transporter permease protein 0.48 PP_4639 P-loop guanosine triphosphatase-dependent zinc chaperone low > 96
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_3345 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.50 PfGW456L13_1446 COG0523: Putative GTPases (G3E family) low > 87
Pseudomonas fluorescens FW300-N2E2 0.62 Pf6N2E2_582 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.48 Pf6N2E2_5080 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family low > 103
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_24455 ABC transporter permease 0.49 AO356_15700 GTP-binding protein low > 104
Pseudomonas fluorescens FW300-N2E3 0.62 AO353_23465 ABC transporter permease 0.49 AO353_14000 GTP-binding protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.62 Pf1N1B4_4591 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.50 Pf1N1B4_2773 COG0523: Putative GTPases (G3E family)
Bosea sp. OAE506 0.61 ABIE41_RS23970 ABC transporter permease 0.29 ABIE41_RS05815 GTP-binding protein low > 77
Pseudomonas simiae WCS417 0.61 PS417_12195 ABC transporter permease 0.49 PS417_24285 GTP-binding protein low > 88
Magnetospirillum magneticum AMB-1 0.60 AMB_RS22190 ABC transporter permease 0.25 AMB_RS11655 GTP-binding protein
Rhodopseudomonas palustris CGA009 0.60 TX73_019115 ABC transporter permease 0.31 TX73_004440 GTP-binding protein low > 86
Agrobacterium fabrum C58 0.58 Atu0189 ABC transporter, membrane spanning protein (peptide) 0.25 Atu3184 hypothetical protein low > 89
Sinorhizobium meliloti 1021 0.57 SMc02830 ABC transporter permease 0.31 SMc03799 hypothetical protein
Phaeobacter inhibens DSM 17395 0.53 PGA1_c30160 ABC transporter permease protein 0.20 PGA1_c08180 cobalamin biosynthesis protein CobW
Variovorax sp. SCN45 0.52 GFF227 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) 0.39 GFF4488 Metal-binding GTPase YjiA low > 127
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_00562 microcin C transport system permease protein 0.32 H281DRAFT_02204 GTPase, G3E family low > 103
Acidovorax sp. GW101-3H11 0.50 Ac3H11_2909 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.38 Ac3H11_2001 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family low > 79
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS07165 peptide ABC transporter permease 0.39 BPHYT_RS01365 cobalamin biosynthesis protein CobW low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF4337 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.38 GFF549 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family low > 90
Ralstonia solanacearum PSI07 0.49 RPSI07_RS18330 ABC transporter permease 0.37 RPSI07_RS23715 GTP-binding protein low > 81
Ralstonia solanacearum GMI1000 0.49 RS_RS05860 ABC transporter permease 0.37 RS_RS00235 GTP-binding protein low > 80
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS13375 peptide ABC transporter permease 0.37 RR42_RS01040 cobalamin biosynthesis protein CobW low > 128
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS15045 ABC transporter permease 0.37 RALBFv3_RS09650 GTP-binding protein low > 76
Ralstonia solanacearum UW163 0.48 UW163_RS12515 ABC transporter permease 0.37 UW163_RS03930 GTP-binding protein
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS10690 ABC transporter permease 0.37 ABZR87_RS05095 GTP-binding protein low > 80
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS06180 ABC transporter permease 0.37 QEN71_RS00345 GTP-binding protein low > 153
Variovorax sp. OAS795 0.47 ABID97_RS16510 ABC transporter permease 0.39 ABID97_RS06160 GTP-binding protein low > 91

Not shown: 12 genomes with orthologs for HER17_RS12930 only; 8 genomes with orthologs for HER17_RS15645 only