Conservation of cofitness between HER17_RS02000 and HER17_RS14880 in Pectobacterium carotovorum WPP14

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02000 two-component system response regulator PmrA 1.0 HER17_RS14880 Tol-Pal system protein TolQ 0.66 4
Dickeya dianthicola ME23 0.88 DZA65_RS20570 two-component system response regulator PmrA 0.92 DZA65_RS06895 Tol-Pal system protein TolQ low > 75
Dickeya dianthicola 67-19 0.88 HGI48_RS19450 two-component system response regulator PmrA 0.92 HGI48_RS06545 Tol-Pal system protein TolQ low > 71
Dickeya dadantii 3937 0.87 DDA3937_RS19350 two-component system response regulator PmrA 0.93 DDA3937_RS06500 Tol-Pal system protein TolQ — —
Enterobacter asburiae PDN3 0.69 EX28DRAFT_3235 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.91 EX28DRAFT_2254 TolQ protein — —
Rahnella sp. WP5 0.67 EX31_RS08605 two-component system response regulator PmrA 0.91 EX31_RS23480 Tol-Pal system protein TolQ low > 89
Enterobacter sp. TBS_079 0.64 MPMX20_04087 Transcriptional regulatory protein BasR 0.91 MPMX20_01366 Tol-Pal system protein TolQ low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF1469 Transcriptional regulatory protein basR/pmrA 0.86 GFF4651 MotA/TolQ/ExbB proton channel family protein — —
Escherichia coli Nissle 1917 0.64 ECOLIN_RS23805 two-component system response regulator BasR 0.86 ECOLIN_RS03925 Tol-Pal system protein TolQ low > 55
Escherichia fergusonii Becca 0.64 EFB2_04469 Transcriptional regulatory protein BasR 0.86 EFB2_03369 Tol-Pal system protein TolQ low > 86
Escherichia coli ECRC100 0.64 OKFHMN_12570 basR two-component system response regulator BasR 0.86 OKFHMN_06820 tolQ Tol-Pal system protein TolQ — —
Escherichia coli BW25113 0.64 b4113 basR DNA-binding response regulator in two-component regulatory system with BasS (NCBI) 0.86 b0737 tolQ membrane spanning protein in TolA-TolQ-TolR complex (NCBI) low > 76
Escherichia coli ECOR38 0.64 HEPCGN_11205 basR two-component system response regulator BasR 0.86 HEPCGN_01450 tolQ Tol-Pal system protein TolQ low > 87
Escherichia coli ECRC99 0.63 KEDOAH_15595 basR two-component system response regulator BasR 0.86 KEDOAH_21145 tolQ Tol-Pal system protein TolQ — —
Escherichia coli ECRC101 0.63 MCAODC_03080 basR two-component system response regulator BasR 0.86 MCAODC_26040 tolQ Tol-Pal system protein TolQ low > 87
Escherichia coli ECOR27 0.63 NOLOHH_04835 basR two-component system response regulator BasR 0.86 NOLOHH_23255 tolQ Tol-Pal system protein TolQ — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_03931 Transcriptional regulatory protein BasR 0.86 OHPLBJKB_02976 Protein TolQ low > 73
Escherichia coli ECRC98 0.63 JDDGAC_16205 basR two-component system response regulator BasR 0.86 JDDGAC_10475 tolQ Tol-Pal system protein TolQ low > 86
Escherichia coli ECRC62 0.63 BNILDI_06655 basR two-component system response regulator BasR 0.86 BNILDI_21250 tolQ Tol-Pal system protein TolQ low > 75
Escherichia coli ECRC102 0.63 NIAGMN_10415 basR two-component system response regulator BasR 0.86 NIAGMN_04870 tolQ Tol-Pal system protein TolQ — —
Escherichia coli BL21 0.63 ECD_03984 response regulator in two-component regulatory system with BasS 0.86 ECD_00697 membrane spanning protein in TolA-TolQ-TolR complex — —
Klebsiella michiganensis M5al 0.62 BWI76_RS08795 DNA-binding response regulator 0.91 BWI76_RS08520 colicin transporter TolQ low > 92
Erwinia tracheiphila SCR3 0.60 LU632_RS21175 pmrA two-component system response regulator PmrA 0.91 LU632_RS16045 tolQ Tol-Pal system protein TolQ — —
Pantoea sp. MT58 0.57 IAI47_08260 two-component system response regulator PmrA 0.90 IAI47_13700 Tol-Pal system protein TolQ low > 76
Serratia liquefaciens MT49 0.57 IAI46_01870 two-component system response regulator PmrA 0.94 IAI46_06320 Tol-Pal system protein TolQ — —
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS12650 response regulator 0.49 ABZR86_RS10820 protein TolQ — —
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS13215 transcriptional regulator 0.43 RR42_RS15475 protein tolQ low > 128
Azospirillum brasilense Sp245 0.42 AZOBR_RS18790 transcriptional regulator 0.36 AZOBR_RS09060 biopolymer transporter ExbB — —
Dechlorosoma suillum PS 0.41 Dsui_0266 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 0.47 Dsui_0482 TolQ protein — —
Alteromonas macleodii MIT1002 0.41 MIT1002_00810 Transcriptional regulatory protein BasR 0.57 MIT1002_01335 Biopolymer transport protein ExbB — —
Rhodopseudomonas palustris CGA009 0.41 TX73_025035 response regulator transcription factor 0.34 TX73_005740 protein TolQ — —
Rhizobium sp. OAE497 0.41 ABIE40_RS23395 response regulator 0.38 ABIE40_RS15615 protein TolQ — —
Acidovorax sp. GW101-3H11 0.41 Ac3H11_1263 Response regulator receiver:Transcriptional regulatory protein, C- terminal 0.40 Ac3H11_3137 MotA/TolQ/ExbB proton channel family protein — —
Vibrio cholerae E7946 ATCC 55056 0.40 CSW01_19595 DNA-binding response regulator 0.67 CSW01_09210 protein TolQ — —
Ralstonia sp. UNC404CL21Col 0.39 ABZR87_RS07960 response regulator transcription factor 0.47 ABZR87_RS08970 protein TolQ low > 80
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_14050 ompR DNA-binding response regulator 0.46 OKGIIK_01860 tolQ protein TolQ — —
Agrobacterium fabrum C58 0.39 Atu5505 two component response regulator 0.36 Atu3717 tolQ protein — —
Marinobacter adhaerens HP15 0.39 HP15_2937 two component transcriptional regulator, winged helix family 0.48 HP15_2038 MotA/TolQ/ExbB proton channel — —
Magnetospirillum magneticum AMB-1 0.39 AMB_RS16365 DNA-binding response regulator 0.37 AMB_RS16235 protein TolQ — —
Rhodanobacter denitrificans FW104-10B01 0.39 LRK54_RS07600 response regulator 0.45 LRK54_RS04890 protein TolQ — —
Rhodanobacter denitrificans MT42 0.39 LRK55_RS07340 response regulator 0.45 LRK55_RS04670 protein TolQ — —
Shewanella loihica PV-4 0.38 Shew_0583 two component transcriptional regulator (RefSeq) 0.64 Shew_1524 MotA/TolQ/ExbB proton channel (RefSeq) low > 60
Ralstonia solanacearum GMI1000 0.36 RS_RS02755 DNA-binding response regulator 0.44 RS_RS03685 protein TolQ low > 80
Shewanella amazonensis SB2B 0.36 Sama_3006 response regulator receiver protein (RefSeq) 0.54 Sama_2089 MotA/TolQ/ExbB proton channel (RefSeq) — —
Dinoroseobacter shibae DFL-12 0.32 Dshi_1508 two component transcriptional regulator, winged helix family (RefSeq) 0.30 Dshi_1108 Tol-Pal system TolQ (RefSeq) — —
Parabacteroides merdae CL09T00C40 0.31 HMPREF1078_RS17705 response regulator transcription factor 0.14 HMPREF1078_RS10270 MotA/TolQ/ExbB proton channel family protein low > 61

Not shown: 4 genomes with orthologs for HER17_RS02000 only; 46 genomes with orthologs for HER17_RS14880 only