Conservation of cofitness between HER17_RS12030 and HER17_RS13460 in Pectobacterium carotovorum WPP14

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12030 aspartate/tyrosine/aromatic aminotransferase 1.0 HER17_RS13460 biotin synthase BioB 0.91 8
Serratia liquefaciens MT49 0.88 IAI46_08750 aspartate/tyrosine/aromatic aminotransferase 0.89 IAI46_06525 biotin synthase BioB low > 86
Escherichia coli ECRC62 0.87 BNILDI_20195 aspC aspartate transaminase 0.86 BNILDI_21040 bioB biotin synthase BioB low > 75
Escherichia coli ECOR27 0.87 NOLOHH_21940 aspC aspartate transaminase 0.86 NOLOHH_22770 bioB biotin synthase BioB low > 75
Escherichia coli BL21 0.87 ECD_00932 aspartate aminotransferase, PLP-dependent 0.86 ECD_00742 biotin synthase — —
Escherichia coli ECOR38 0.87 HEPCGN_23140 aspC aspartate transaminase 0.86 HEPCGN_01640 bioB biotin synthase BioB low > 87
Escherichia coli BW25113 0.87 b0928 aspC aspartate aminotransferase, PLP-dependent (NCBI) 0.86 b0775 bioB biotin synthase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_02738 Aspartate aminotransferase 0.86 OHPLBJKB_02938 Biotin synthase low > 73
Escherichia coli Nissle 1917 0.86 ECOLIN_RS04910 aspartate transaminase 0.86 ECOLIN_RS04130 biotin synthase BioB — —
Rahnella sp. WP5 0.86 EX31_RS18145 aspartate/tyrosine/aromatic aminotransferase 0.90 EX31_RS23695 biotin synthase BioB low > 89
Escherichia fergusonii Becca 0.86 EFB2_03136 Aspartate aminotransferase 0.86 EFB2_03330 Biotin synthase low > 86
Escherichia coli ECRC99 0.86 KEDOAH_22350 aspC aspartate transaminase 0.86 KEDOAH_21510 bioB biotin synthase BioB — —
Escherichia coli ECRC102 0.86 NIAGMN_03105 aspC aspartate transaminase 0.86 NIAGMN_04445 bioB biotin synthase BioB — —
Escherichia coli ECRC101 0.86 MCAODC_24775 aspC aspartate transaminase 0.86 MCAODC_25615 bioB biotin synthase BioB low > 87
Escherichia coli ECRC98 0.86 JDDGAC_08995 aspC aspartate transaminase 0.86 JDDGAC_10035 bioB biotin synthase BioB low > 86
Escherichia coli ECRC100 0.86 OKFHMN_05385 aspC aspartate transaminase 0.86 OKFHMN_06400 bioB biotin synthase BioB low > 80
Dickeya dianthicola 67-19 0.86 HGI48_RS12990 aspartate/tyrosine/aromatic aminotransferase 0.92 HGI48_RS08675 biotin synthase BioB 0.79 20
Klebsiella michiganensis M5al 0.86 BWI76_RS09870 aromatic amino acid aminotransferase 0.85 BWI76_RS08760 biotin synthase low > 92
Enterobacter sp. TBS_079 0.86 MPMX20_01586 Aspartate aminotransferase 0.84 MPMX20_01403 Biotin synthase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF3685 Aspartate aminotransferase (EC 2.6.1.1) 0.84 GFF671 Biotin synthase (EC 2.8.1.6) low > 78
Dickeya dadantii 3937 0.85 DDA3937_RS12915 aspartate/tyrosine/aromatic aminotransferase 0.92 DDA3937_RS08510 biotin synthase BioB low > 74
Enterobacter asburiae PDN3 0.85 EX28DRAFT_2008 Aspartate/tyrosine/aromatic aminotransferase 0.84 EX28DRAFT_2216 biotin synthase (EC 2.8.1.6) 0.50 57
Dickeya dianthicola ME23 0.85 DZA65_RS13450 aspartate/tyrosine/aromatic aminotransferase 0.92 DZA65_RS08965 biotin synthase BioB low > 75
Pantoea sp. MT58 0.84 IAI47_12765 aspartate/tyrosine/aromatic aminotransferase 0.85 IAI47_13530 biotin synthase BioB low > 76
Erwinia tracheiphila SCR3 0.83 LU632_RS09905 aspartate/tyrosine/aromatic aminotransferase 0.87 LU632_RS09130 bioB biotin synthase BioB — —
Shewanella loihica PV-4 0.66 Shew_1999 aromatic amino acid aminotransferase (RefSeq) 0.64 Shew_1719 biotin synthase (RefSeq) — —
Shewanella sp. ANA-3 0.64 Shewana3_2121 aromatic amino acid aminotransferase (RefSeq) 0.65 Shewana3_2519 biotin synthase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.64 Sama_1805 aromatic amino acid aminotransferase (RefSeq) 0.65 Sama_1438 biotin synthase (RefSeq) — —
Shewanella oneidensis MR-1 0.64 SO2350 aspC-1 aspartate aminotransferase (NCBI ptt file) 0.66 SO2740 bioB biotin synthase (NCBI ptt file) — —
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_06530 aromatic amino acid aminotransferase 0.70 CSW01_05645 biotin synthase low > 62
Castellaniella sp019104865 MT123 0.49 ABCV34_RS05115 amino acid aminotransferase 0.56 ABCV34_RS15280 biotin synthase BioB — —
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.130.1 hypothetical protein 0.56 Xcc-8004.505.1 Biotin synthase (EC 2.8.1.6) 0.55 49
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_13195 Aminotransferase 0.53 OKGIIK_13650 bioB biotin synthase BioB low > 52
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_2632 tyrosine aminotransferase (EC 2.6.1.57) (from data) 0.67 Pf6N2E2_4759 Biotin synthase (EC 2.8.1.6) low > 103
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_03985 L-phenylalanine transaminase (EC 2.6.1.57) (from data) 0.67 AO356_14135 biotin synthase low > 104
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS10685 aspartate/tyrosine/aromatic aminotransferase 0.54 LRK54_RS10260 biotin synthase BioB low > 59
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_4396 tyrosine aminotransferase (EC 2.6.1.57) (from data) 0.67 PfGW456L13_1147 Biotin synthase (EC 2.8.1.6) low > 87
Pseudomonas fluorescens SBW25 0.46 PFLU_RS21880 aspartate/tyrosine/aromatic aminotransferase 0.67 PFLU_RS27650 biotin synthase BioB low > 109
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS21880 aspartate/tyrosine/aromatic aminotransferase 0.67 PFLU_RS27650 biotin synthase BioB low > 109
Pseudomonas simiae WCS417 0.46 PS417_19910 aromatic amino acid aminotransferase 0.67 PS417_26005 biotin synthase low > 88
Pseudomonas sp. RS175 0.46 PFR28_00800 Aspartate aminotransferase 0.68 PFR28_04103 Biotin synthase low > 88
Rhodanobacter denitrificans MT42 0.45 LRK55_RS10325 amino acid aminotransferase 0.54 LRK55_RS09900 biotin synthase BioB low > 63
Marinobacter adhaerens HP15 0.45 HP15_858 phenylalanine aminotransferase (EC 2.6.1.57) (from data) 0.64 HP15_2486 biotin synthase low > 73
Pseudomonas sp. S08-1 0.45 OH686_21225 Aspartate aminotransferase or Aromatic-amino-acid aminotransferase 0.68 OH686_10355 biotin synthase low > 80
Alteromonas macleodii MIT1002 0.45 MIT1002_02269 Aspartate aminotransferase 0.66 MIT1002_01379 Biotin synthase — —
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_1973 Aspartate transaminase 0.66 Psyr_4687 biotin synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_1973 Aspartate transaminase 0.66 Psyr_4687 biotin synthase low > 86
Sphingomonas koreensis DSMZ 15582 0.41 Ga0059261_1688 Aspartate/tyrosine/aromatic aminotransferase 0.55 Ga0059261_3989 biotin synthase (EC 2.8.1.6) low > 68
Phaeobacter inhibens DSM 17395 0.40 PGA1_c29420 aromatic-amino-acid transaminase [EC:2.6.1.57] (from data) 0.55 PGA1_c09120 biotin synthase BioB — —

Not shown: 3 genomes with orthologs for HER17_RS12030 only; 44 genomes with orthologs for HER17_RS13460 only