Conservation of cofitness between HER17_RS09145 and HER17_RS09580 in Pectobacterium carotovorum WPP14

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS09145 multidrug efflux SMR transporter 1.0 HER17_RS09580 thiol peroxidase 0.58 6
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_27125 multidrug transporter 0.72 AO356_25865 peroxidase — —
Rahnella sp. WP5 0.58 EX31_RS00585 multidrug efflux SMR transporter 0.81 EX31_RS06340 thiol peroxidase low > 89
Escherichia coli Nissle 1917 0.58 ECOLIN_RS24100 quaternary ammonium compound efflux SMR transporter SugE 0.82 ECOLIN_RS07950 thiol peroxidase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_03892 Quaternary ammonium compound-resistance protein SugE 0.82 OHPLBJKB_02358 Thiol peroxidase low > 73
Escherichia coli BL21 0.58 ECD_04020 multidrug efflux system protein 0.82 ECD_01301 lipid hydroperoxide peroxidase low > 61
Escherichia coli ECRC100 0.58 OKFHMN_12375 sugE quaternary ammonium compound efflux SMR transporter SugE 0.82 OKFHMN_02300 tpx thiol peroxidase low > 80
Escherichia coli ECRC102 0.58 NIAGMN_10220 sugE quaternary ammonium compound efflux SMR transporter SugE 0.82 NIAGMN_26470 tpx thiol peroxidase — —
Escherichia coli ECRC98 0.58 JDDGAC_16010 sugE quaternary ammonium compound efflux SMR transporter SugE 0.82 JDDGAC_04845 tpx thiol peroxidase low > 86
Escherichia coli ECRC62 0.58 BNILDI_06855 sugE quaternary ammonium compound efflux SMR transporter SugE 0.82 BNILDI_18145 tpx thiol peroxidase low > 75
Escherichia coli ECRC101 0.58 MCAODC_02885 sugE quaternary ammonium compound efflux SMR transporter SugE 0.82 MCAODC_15970 tpx thiol peroxidase low > 87
Escherichia fergusonii Becca 0.58 EFB2_04385 Guanidinium exporter 0.82 EFB2_02603 Thiol peroxidase low > 86
Escherichia coli BW25113 0.58 b4148 sugE suppresses groEL, may be chaperone (VIMSS) 0.82 b1324 tpx thiol peroxidase (NCBI) low > 76
Escherichia coli ECOR27 0.58 NOLOHH_04635 sugE quaternary ammonium compound efflux SMR transporter SugE 0.82 NOLOHH_19995 tpx thiol peroxidase — —
Escherichia coli ECRC99 0.58 KEDOAH_15790 sugE quaternary ammonium compound efflux SMR transporter SugE 0.82 KEDOAH_26475 tpx thiol peroxidase — —
Escherichia coli ECOR38 0.58 HEPCGN_10600 sugE quaternary ammonium compound efflux SMR transporter SugE 0.83 HEPCGN_25890 tpx thiol peroxidase low > 87
Paraburkholderia graminis OAS925 0.57 ABIE53_001558 quaternary ammonium compound-resistance protein SugE 0.63 ABIE53_003571 thiol peroxidase low > 113
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS06470 membrane protein 0.63 BPHYT_RS17030 lipid hydroperoxide peroxidase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_04535 quaternary ammonium compound-resistance protein SugE 0.62 H281DRAFT_06280 thiol peroxidase (atypical 2-Cys peroxiredoxin) — —
Enterobacter sp. TBS_079 0.56 MPMX20_00430 Guanidinium exporter 0.81 MPMX20_02452 Thiol peroxidase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF2001 Quaternary ammonium compound-resistance protein SugE 0.79 GFF2678 Thiol peroxidase, Tpx-type (EC 1.11.1.15) low > 78
Klebsiella michiganensis M5al 0.55 BWI76_RS02430 multidrug transporter 0.79 BWI76_RS12495 2-Cys peroxiredoxin low > 92
Serratia liquefaciens MT49 0.55 IAI46_01525 quaternary ammonium compound efflux SMR transporter SugE 0.81 IAI46_13465 thiol peroxidase — —
Enterobacter asburiae PDN3 0.55 EX28DRAFT_3348 Membrane transporters of cations and cationic drugs 0.81 EX28DRAFT_0996 Peroxiredoxin low > 76
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS24335 quaternary ammonium compound efflux SMR transporter SugE 0.62 QEN71_RS27185 thiol peroxidase low > 153
Rhodanobacter denitrificans MT42 0.55 LRK55_RS00220 quaternary ammonium compound efflux SMR transporter SugE 0.68 LRK55_RS05560 thiol peroxidase low > 63
Rhodanobacter denitrificans FW104-10B01 0.55 LRK54_RS00480 quaternary ammonium compound efflux SMR transporter SugE 0.68 LRK54_RS05805 thiol peroxidase low > 59
Pseudomonas sp. S08-1 0.53 OH686_19635 small multidrug resistance family (SMR) protein 0.67 OH686_00915 Thiol peroxidase, Tpx-type low > 80
Pseudomonas putida KT2440 0.52 PP_1701 transporter 0.68 PP_3587 lipid hydroperoxide peroxidase — —
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_3729 Quaternary ammonium compound-resistance protein SugE 0.71 Pf1N1B4_4662 Thiol peroxidase, Tpx-type (EC 1.11.1.15) — —
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_4218 Quaternary ammonium compound-resistance protein SugE 0.72 PfGW456L13_3268 Thiol peroxidase, Tpx-type (EC 1.11.1.15) low > 87
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_5766 Quaternary ammonium compound-resistance protein SugE 0.71 Pf6N2E2_1274 Thiol peroxidase, Tpx-type (EC 1.11.1.15) — —
Pseudomonas sp. RS175 0.51 PFR28_03184 Guanidinium exporter 0.72 PFR28_02196 Thiol peroxidase low > 88
Pseudomonas fluorescens SBW25 0.51 PFLU_RS09245 quaternary ammonium compound efflux SMR transporter SugE 0.66 PFLU_RS13420 thiol peroxidase low > 109
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS09245 quaternary ammonium compound efflux SMR transporter SugE 0.66 PFLU_RS13420 thiol peroxidase low > 109
Pseudomonas simiae WCS417 0.51 PS417_09235 molecular chaperone 0.66 PS417_12735 peroxidase low > 88
Desulfovibrio vulgaris Miyazaki F 0.50 DvMF_3195 small multidrug resistance protein (RefSeq) 0.38 DvMF_0867 Redoxin domain protein (RefSeq) low > 51
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_02525 molecular chaperone 0.71 AO353_22885 peroxidase — —
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS08255 quaternary ammonium compound efflux SMR transporter SugE 0.71 ABZR86_RS18605 thiol peroxidase low > 74
Magnetospirillum magneticum AMB-1 0.45 AMB_RS06565 QacE family quaternary ammonium compound efflux SMR transporter 0.51 AMB_RS19610 thiol peroxidase low > 64
Vibrio cholerae E7946 ATCC 55056 0.44 CSW01_06990 QacE family quaternary ammonium compound efflux SMR transporter 0.48 CSW01_04245 2-Cys peroxiredoxin low > 62
Pseudomonas stutzeri RCH2 0.42 Psest_0857 Membrane transporters of cations and cationic drugs 0.60 Psest_2135 Peroxiredoxin low > 67
Alteromonas macleodii MIT1002 0.40 MIT1002_00131 Quaternary ammonium compound-resistance protein SugE 0.53 MIT1002_02147 putative thiol peroxidase low > 70
Bacteroides stercoris CC31F 0.37 HMPREF1181_RS10150 multidrug efflux SMR transporter 0.53 HMPREF1181_RS10845 thiol peroxidase low > 56
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS21585 multidrug efflux SMR transporter 0.62 ABZR87_RS01670 thiol peroxidase low > 80
Bacteroides ovatus ATCC 8483 0.35 BACOVA_03054 multidrug resistance protein, SMR family 0.53 BACOVA_00596 redoxin family protein low > 94
Dechlorosoma suillum PS 0.35 Dsui_0031 cation/cationic drug transporter 0.64 Dsui_0826 peroxiredoxin — —
Bacteroides thetaiotaomicron VPI-5482 0.35 BT1388 integral membrane protein (NCBI ptt file) 0.54 BT1329 putative thiol peroxidase (NCBI ptt file) low > 81

Not shown: 19 genomes with orthologs for HER17_RS09145 only; 19 genomes with orthologs for HER17_RS09580 only