Conservation of cofitness between HER17_RS01965 and HER17_RS08120 in Pectobacterium carotovorum WPP14

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS01965 peptidylprolyl isomerase 1.0 HER17_RS08120 chemotaxis response regulator protein-glutamate methylesterase 0.85 1
Dickeya dianthicola ME23 0.72 DZA65_RS20605 peptidylprolyl isomerase 0.95 DZA65_RS14055 chemotaxis response regulator protein-glutamate methylesterase 0.87 8
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF3723 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.85 GFF1664 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) low > 78
Dickeya dianthicola 67-19 0.71 HGI48_RS19515 peptidylprolyl isomerase 0.95 HGI48_RS13570 chemotaxis response regulator protein-glutamate methylesterase low > 71
Dickeya dadantii 3937 0.71 DDA3937_RS19395 peptidylprolyl isomerase 0.95 DDA3937_RS13525 chemotaxis response regulator protein-glutamate methylesterase 0.50 72
Escherichia coli ECOR27 0.71 NOLOHH_09085 slyD peptidylprolyl isomerase 0.86 NOLOHH_16590 cheB protein-glutamate methylesterase/protein glutamine deamidase low > 75
Escherichia coli ECRC62 0.71 BNILDI_02435 slyD peptidylprolyl isomerase 0.86 BNILDI_15380 cheB protein-glutamate methylesterase/protein glutamine deamidase low > 75
Escherichia fergusonii Becca 0.71 EFB2_00474 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 0.86 EFB2_02060 Protein-glutamate methylesterase/protein-glutamine glutaminase low > 86
Escherichia coli BL21 0.71 ECD_03200 FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) 0.86 ECD_01854 fused chemotaxis regulator: protein-glutamate methylesterase in two-component regulatory system with CheA 0.55 38
Escherichia coli ECOR38 0.71 HEPCGN_16115 slyD peptidylprolyl isomerase 0.86 HEPCGN_04570 cheB protein-glutamate methylesterase/protein glutamine deamidase low > 87
Escherichia coli ECRC102 0.71 NIAGMN_15055 slyD peptidylprolyl isomerase 0.86 NIAGMN_01910 cheB protein-glutamate methylesterase/protein glutamine deamidase — —
Escherichia coli BW25113 0.71 b3349 slyD FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) (NCBI) 0.85 b1883 cheB chemotaxis-specific methylesterase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_00354 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 0.86 OHPLBJKB_01845 Chemotaxis response regulator protein-glutamate methylesterase low > 73
Escherichia coli ECRC98 0.71 JDDGAC_20915 slyD peptidylprolyl isomerase 0.86 JDDGAC_00725 cheB protein-glutamate methylesterase/protein glutamine deamidase low > 86
Escherichia coli Nissle 1917 0.71 ECOLIN_RS19180 peptidylprolyl isomerase 0.86 ECOLIN_RS10755 protein-glutamate methylesterase/protein glutamine deamidase low > 55
Escherichia coli ECRC101 0.71 MCAODC_07815 slyD peptidylprolyl isomerase 0.86 MCAODC_19255 cheB protein-glutamate methylesterase/protein glutamine deamidase low > 87
Pantoea sp. MT58 0.71 IAI47_02040 peptidylprolyl isomerase 0.86 IAI47_08330 chemotaxis response regulator protein-glutamate methylesterase low > 76
Escherichia coli ECRC100 0.71 OKFHMN_17285 slyD peptidylprolyl isomerase 0.86 OKFHMN_26150 cheB protein-glutamate methylesterase/protein glutamine deamidase low > 80
Escherichia coli ECRC99 0.71 KEDOAH_10855 slyD peptidylprolyl isomerase 0.86 KEDOAH_01955 cheB protein-glutamate methylesterase/protein glutamine deamidase — —
Enterobacter asburiae PDN3 0.70 EX28DRAFT_4181 FKBP-type peptidyl-prolyl cis-trans isomerases 2 0.86 EX28DRAFT_0673 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain low > 76
Enterobacter sp. TBS_079 0.70 MPMX20_04242 hypothetical protein 0.86 MPMX20_02787 Protein-glutamate methylesterase/protein-glutamine glutaminase low > 85
Erwinia tracheiphila SCR3 0.65 LU632_RS22725 slyD peptidylprolyl isomerase 0.85 LU632_RS13525 chemotaxis response regulator protein-glutamate methylesterase low > 74
Shewanella amazonensis SB2B 0.36 Sama_0904 peptidyl-prolyl cis-trans isomerase SlyD (RefSeq) 0.46 Sama_3499 protein-glutamate methylesterase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.36 MIT1002_02725 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 0.32 MIT1002_01107 Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon low > 70
Shewanella loihica PV-4 0.35 Shew_1078 peptidylprolyl isomerase, FKBP-type (RefSeq) 0.47 Shew_0109 response regulator receiver modulated CheB methylesterase (RefSeq) low > 60
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS00495 peptidylprolyl isomerase 0.50 ABZR86_RS22205 chemotaxis response regulator protein-glutamate methylesterase low > 74
Pseudomonas stutzeri RCH2 0.34 Psest_3212 FKBP-type peptidyl-prolyl cis-trans isomerases 2 0.47 Psest_0653 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_1009 Peptidylprolyl isomerase, FKBP-type 0.47 Psyr_0781 Protein-glutamate methylesterase — —
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_1009 Peptidylprolyl isomerase, FKBP-type 0.47 Psyr_0781 Protein-glutamate methylesterase low > 86
Pseudomonas sp. RS175 0.33 PFR28_00197 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 0.47 PFR28_01434 Protein-glutamate methylesterase/protein-glutamine glutaminase low > 88
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_5262 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.48 Pf6N2E2_1775 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) low > 103
Pseudomonas fluorescens SBW25 0.33 PFLU_RS03790 peptidylprolyl isomerase 0.48 PFLU_RS24965 chemotaxis response regulator protein-glutamate methylesterase low > 109
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS03790 peptidylprolyl isomerase 0.48 PFLU_RS24965 chemotaxis response regulator protein-glutamate methylesterase low > 109
Pseudomonas simiae WCS417 0.33 PS417_03740 peptidylprolyl isomerase 0.30 PS417_19675 chemotaxis protein CheY low > 88
Pseudomonas putida KT2440 0.33 PP_0776 FKBP-type peptidyl-prolyl cis-trans isomerase 0.31 PP_4337 chemotaxis response regulator protein-glutamate methylesterase of group 1 operon — —
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_16690 peptidylprolyl isomerase 0.48 AO356_22645 chemotaxis protein CheY low > 104
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_03570 Peptidyl-prolyl cis-trans isomerase 0.47 OKGIIK_02915 cheB Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains low > 52
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_4988 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.31 PfGW456L13_4327 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) low > 87
Rhodanobacter denitrificans MT42 0.32 LRK55_RS14460 peptidylprolyl isomerase 0.49 LRK55_RS13410 chemotaxis response regulator protein-glutamate methylesterase low > 63
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS14745 peptidylprolyl isomerase 0.49 LRK54_RS13670 chemotaxis response regulator protein-glutamate methylesterase low > 59
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_05055 peptidylprolyl isomerase 0.31 AO353_18805 chemotaxis protein CheY low > 101
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_1052 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.31 Pf1N1B4_3630 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) low > 87
Ralstonia solanacearum PSI07 0.30 RPSI07_RS18450 peptidylprolyl isomerase 0.63 RPSI07_RS06230 chemotaxis response regulator protein-glutamate methylesterase low > 81
Ralstonia solanacearum GMI1000 0.30 RS_RS05725 peptidylprolyl isomerase 0.63 RS_RS23895 chemotaxis response regulator protein-glutamate methylesterase low > 80
Ralstonia solanacearum UW163 0.29 UW163_RS12380 peptidylprolyl isomerase 0.62 UW163_RS21735 chemotaxis response regulator protein-glutamate methylesterase — —
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS14910 peptidylprolyl isomerase 0.62 RALBFv3_RS17415 chemotaxis response regulator protein-glutamate methylesterase low > 76
Lysobacter sp. OAE881 0.29 ABIE51_RS06395 peptidylprolyl isomerase 0.52 ABIE51_RS16960 chemotaxis response regulator protein-glutamate methylesterase low > 62
Dechlorosoma suillum PS 0.28 Dsui_2872 FKBP-type peptidyl-prolyl cis-trans isomerase 0.53 Dsui_1713 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain low > 51
Pseudomonas sp. S08-1 0.28 OH686_06255 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 0.44 OH686_21840 Chemotaxis response regulator protein-glutamate methylesterase CheB low > 80
Magnetospirillum magneticum AMB-1 0.27 AMB_RS19590 peptidylprolyl isomerase 0.28 AMB_RS01635 chemotaxis response regulator protein-glutamate methylesterase low > 64
Herbaspirillum seropedicae SmR1 0.24 HSERO_RS16370 peptidyl-prolyl cis-trans isomerase 0.63 HSERO_RS10125 chemotaxis protein low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.24 GFF3652 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.60 GFF1479 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) low > 90
Variovorax sp. SCN45 0.22 GFF7163 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.71 GFF5767 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) low > 127
Acidovorax sp. GW101-3H11 0.21 Ac3H11_1303 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.59 Ac3H11_1425 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) low > 79
Pontibacter actiniarum KMM 6156, DSM 19842 0.20 CA264_05445 peptidylprolyl isomerase 0.24 CA264_07600 chemotaxis response regulator protein-glutamate methylesterase low > 74

Not shown: 8 genomes with orthologs for HER17_RS01965 only; 30 genomes with orthologs for HER17_RS08120 only