Conservation of cofitness between HER17_RS05050 and HER17_RS01745 in Pectobacterium carotovorum WPP14

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS05050 recombination regulator RecX 1.0 HER17_RS01745 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA 0.69 13
Dickeya dianthicola ME23 0.57 DZA65_RS17445 recombination regulator RecX 0.84 DZA65_RS20795 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 75
Dickeya dianthicola 67-19 0.57 HGI48_RS16350 recombination regulator RecX 0.84 HGI48_RS19710 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 71
Dickeya dadantii 3937 0.56 DDA3937_RS16240 recombination regulator RecX 0.84 DDA3937_RS19580 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 74
Serratia liquefaciens MT49 0.54 IAI46_03845 recombination regulator RecX 0.82 IAI46_23740 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 86
Rahnella sp. WP5 0.49 EX31_RS07795 recombination regulator RecX 0.82 EX31_RS04750 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 89
Escherichia coli BL21 0.47 ECD_02548 regulatory protein for RecA 0.81 ECD_03248 penicillin-binding protein 1a, murein transglycosylase and transpeptidase low > 61
Escherichia coli ECRC99 0.47 KEDOAH_07425 recX recombination regulator RecX 0.81 KEDOAH_11060 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA — —
Escherichia coli Nissle 1917 0.47 ECOLIN_RS15055 recombination regulator RecX 0.81 ECOLIN_RS19395 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 55
Escherichia coli ECRC101 0.47 MCAODC_11235 recX recombination regulator RecX 0.81 MCAODC_07610 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 87
Escherichia coli ECRC98 0.47 JDDGAC_24375 recX recombination regulator RecX 0.81 JDDGAC_20710 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_01036 Regulatory protein RecX 0.81 OHPLBJKB_00307 Penicillin-binding protein 1A 0.49 56
Escherichia coli ECRC102 0.47 NIAGMN_18480 recX recombination regulator RecX 0.81 NIAGMN_14850 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA — —
Escherichia coli ECOR27 0.47 NOLOHH_12550 recX recombination regulator RecX 0.81 NOLOHH_08870 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 75
Escherichia coli ECRC100 0.47 OKFHMN_20710 recX recombination regulator RecX 0.81 OKFHMN_17080 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 80
Escherichia coli BW25113 0.47 b2698 recX RecA regulator RecX (NCBI) 0.81 b3396 mrcA peptidoglycan synthetase; penicillin-binding protein 1A (VIMSS) low > 76
Escherichia fergusonii Becca 0.47 EFB2_01226 Regulatory protein RecX 0.81 EFB2_00432 Penicillin-binding protein 1A low > 86
Escherichia coli ECRC62 0.47 BNILDI_11110 recX recombination regulator RecX 0.81 BNILDI_02650 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 75
Enterobacter sp. TBS_079 0.47 MPMX20_03579 Regulatory protein RecX 0.80 MPMX20_04284 Penicillin-binding protein 1A low > 85
Escherichia coli ECOR38 0.47 HEPCGN_19905 recX recombination regulator RecX 0.81 HEPCGN_15900 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 87
Enterobacter asburiae PDN3 0.46 EX28DRAFT_2784 Uncharacterized protein conserved in bacteria 0.80 EX28DRAFT_4146 penicillin-binding protein, 1A family low > 76
Pantoea sp. MT58 0.45 IAI47_04305 regulatory protein RecX 0.81 IAI47_01860 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF4692 Regulatory protein RecX 0.81 GFF623 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) low > 78
Klebsiella michiganensis M5al 0.43 BWI76_RS22175 recombination regulator RecX 0.79 BWI76_RS26125 carboxypeptidase/penicillin-binding protein 1A — —
Erwinia tracheiphila SCR3 0.40 LU632_RS15730 recombination regulator RecX 0.79 LU632_RS22900 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA — —
Pseudomonas sp. S08-1 0.26 OH686_18210 Regulatory protein RecX 0.36 OH686_10055 Multimodular transpeptidase-transglycosylase low > 80
Shewanella loihica PV-4 0.25 Shew_1216 regulatory protein RecX (RefSeq) 0.48 Shew_0207 1A family penicillin-binding protein (RefSeq) — —
Lysobacter sp. OAE881 0.24 ABIE51_RS07805 recombination regulator RecX 0.30 ABIE51_RS17190 penicillin-binding protein 1A — —
Vibrio cholerae E7946 ATCC 55056 0.24 CSW01_02880 regulatory protein RecX 0.52 CSW01_13335 penicillin-binding protein 1A — —
Pseudomonas fluorescens GW456-L13 0.24 PfGW456L13_4667 Regulatory protein RecX 0.34 PfGW456L13_282 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) low > 87
Pseudomonas simiae WCS417 0.24 PS417_05820 recombinase RecX 0.35 PS417_01955 peptidase low > 88
Pseudomonas fluorescens SBW25 0.24 PFLU_RS05890 recombination regulator RecX 0.36 PFLU_RS02000 penicillin-binding protein 1A — —
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS05890 recombination regulator RecX 0.36 PFLU_RS02000 penicillin-binding protein 1A low > 109
Pseudomonas fluorescens FW300-N2C3 0.23 AO356_05665 recombinase RecX 0.36 AO356_09420 peptidase — —
Pseudomonas fluorescens FW300-N2E3 0.23 AO353_16810 recombinase RecX 0.37 AO353_12470 peptidase low > 101
Pseudomonas fluorescens FW300-N1B4 0.23 Pf1N1B4_3144 Regulatory protein RecX 0.36 Pf1N1B4_1544 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) — —
Pseudomonas sp. RS175 0.23 PFR28_00473 Regulatory protein RecX 0.36 PFR28_05006 Penicillin-binding protein 1A low > 88
Kangiella aquimarina DSM 16071 0.23 B158DRAFT_1532 Uncharacterized protein conserved in bacteria 0.39 B158DRAFT_0757 penicillin-binding protein, 1A family — —
Pseudomonas stutzeri RCH2 0.23 Psest_2871 Uncharacterized protein conserved in bacteria 0.36 Psest_3720 penicillin-binding protein, 1A family — —
Pseudomonas fluorescens FW300-N2E2 0.23 Pf6N2E2_2992 Regulatory protein RecX 0.35 Pf6N2E2_3761 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.22 Psyr_1379 Regulatory protein RecX 0.36 Psyr_0402 Peptidoglycan glycosyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.22 Psyr_1379 Regulatory protein RecX 0.36 Psyr_0402 Peptidoglycan glycosyltransferase low > 86
Pseudomonas putida KT2440 0.22 PP_1630 Regulatory protein RecX 0.36 PP_5084 penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase low > 96
Shewanella amazonensis SB2B 0.21 Sama_1047 hypothetical protein (RefSeq) 0.50 Sama_3374 penicillin-binding protein 1A (RefSeq) low > 62
Acinetobacter radioresistens SK82 0.21 MPMX26_01307 Regulatory protein RecX 0.32 MPMX26_02817 Penicillin-binding protein 1A low > 36
Xanthomonas campestris pv. campestris strain 8004 0.19 Xcc-8004.3108.1 Regulatory protein RecX 0.31 Xcc-8004.1196.1 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) low > 74
Castellaniella sp019104865 MT123 0.19 ABCV34_RS04455 recombination regulator RecX 0.28 ABCV34_RS12695 PBP1A family penicillin-binding protein — —
Dechlorosoma suillum PS 0.18 Dsui_0706 hypothetical protein 0.31 Dsui_1186 penicillin-binding protein, 1A family — —
Ralstonia solanacearum PSI07 0.17 RPSI07_RS21255 recombination regulator RecX 0.30 RPSI07_RS10265 penicillin-binding protein 1A — —
Ralstonia solanacearum GMI1000 0.17 RS_RS02765 regulatory protein RecX 0.30 RS_RS14915 penicillin-binding protein 1A — —
Herbaspirillum seropedicae SmR1 0.17 HSERO_RS03275 regulatory protein RecX 0.28 HSERO_RS06975 penicillin-binding protein 1A low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.16 GFF2501 Regulatory protein RecX 0.29 GFF1338 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) — —

Not shown: 1 genomes with orthologs for HER17_RS05050 only; 37 genomes with orthologs for HER17_RS01745 only