Conservation of cofitness between HER17_RS02600 and HER17_RS00965 in Pectobacterium carotovorum WPP14

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02600 protease modulator HflC 1.0 HER17_RS00965 HTH-type transcriptional repressor FabR 0.81 12
Dickeya dadantii 3937 0.82 DDA3937_RS18595 protease modulator HflC 0.93 DDA3937_RS00980 HTH-type transcriptional repressor FabR
Dickeya dianthicola ME23 0.82 DZA65_RS19665 protease modulator HflC 0.93 DZA65_RS21440 HTH-type transcriptional repressor FabR low > 75
Dickeya dianthicola 67-19 0.82 HGI48_RS18530 protease modulator HflC 0.93 HGI48_RS20395 HTH-type transcriptional repressor FabR low > 71
Serratia liquefaciens MT49 0.81 IAI46_01640 protease modulator HflC 0.91 IAI46_24465 HTH-type transcriptional repressor FabR low > 86
Erwinia tracheiphila SCR3 0.79 LU632_RS02070 hflC protease modulator HflC 0.90 LU632_RS19580 fabR HTH-type transcriptional repressor FabR low > 74
Pantoea sp. MT58 0.77 IAI47_02605 protease modulator HflC 0.90 IAI47_00940 HTH-type transcriptional repressor FabR low > 76
Rahnella sp. WP5 0.77 EX31_RS08805 protease modulator HflC 0.90 EX31_RS14160 HTH-type transcriptional repressor FabR low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF828 HflC protein 0.91 GFF2349 Unsaturated fatty acid biosythesis repressor FabR, TetR family low > 78
Escherichia fergusonii Becca 0.77 EFB2_04360 Modulator of FtsH protease HflC 0.92 EFB2_04647 HTH-type transcriptional repressor FabR 0.45 18
Escherichia coli ECRC101 0.77 MCAODC_02755 hflC protease modulator HflC 0.92 MCAODC_04045 fabR HTH-type transcriptional repressor FabR low > 87
Escherichia coli ECOR38 0.77 HEPCGN_10470 hflC protease modulator HflC 0.92 HEPCGN_12200 fabR HTH-type transcriptional repressor FabR low > 87
Escherichia coli ECRC100 0.77 OKFHMN_12240 hflC protease modulator HflC 0.92 OKFHMN_13545 fabR HTH-type transcriptional repressor FabR low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.77 OHPLBJKB_03867 Modulator of FtsH protease HflC 0.92 OHPLBJKB_04087 HTH-type transcriptional repressor FabR low > 73
Escherichia coli Nissle 1917 0.77 ECOLIN_RS24245 protease modulator HflC 0.92 ECOLIN_RS22890 HTH-type transcriptional repressor FabR
Escherichia coli BW25113 0.77 b4175 hflC modulator for HflB protease specific for phage lambda cII repressor (NCBI) 0.92 b3963 fabR DNA-binding transcriptional repressor (RefSeq) low > 76
Escherichia coli ECRC62 0.77 BNILDI_06985 hflC protease modulator HflC 0.92 BNILDI_05835 fabR HTH-type transcriptional repressor FabR low > 75
Escherichia coli ECRC102 0.77 NIAGMN_10090 hflC protease modulator HflC 0.92 NIAGMN_11295 fabR HTH-type transcriptional repressor FabR
Escherichia coli ECRC99 0.77 KEDOAH_15915 hflC protease modulator HflC 0.92 KEDOAH_14615 fabR HTH-type transcriptional repressor FabR
Escherichia coli ECRC98 0.77 JDDGAC_15880 hflC protease modulator HflC 0.92 JDDGAC_17170 fabR HTH-type transcriptional repressor FabR low > 86
Escherichia coli BL21 0.77 ECD_04042 HflB protease modulator specific for phage lambda cII repressor 0.92 ECD_03848 transcriptional repressor of fabA and fabB low > 61
Escherichia coli ECOR27 0.77 NOLOHH_04505 hflC protease modulator HflC 0.92 NOLOHH_05690 fabR HTH-type transcriptional repressor FabR low > 75
Klebsiella michiganensis M5al 0.75 BWI76_RS02550 protease modulator HflC 0.91 BWI76_RS00875 DNA-binding transcriptional regulator FabR 0.51 14
Enterobacter sp. TBS_079 0.74 MPMX20_00456 Modulator of FtsH protease HflC 0.92 MPMX20_04517 HTH-type transcriptional repressor FabR low > 85
Enterobacter asburiae PDN3 0.73 EX28DRAFT_3372 HflC protein 0.92 EX28DRAFT_4426 transcriptional regulator, TetR family low > 76
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_01850 protease modulator HflC 0.71 CSW01_00775 HTH-type transcriptional repressor FabR low > 62
Alteromonas macleodii MIT1002 0.48 MIT1002_03785 Modulator of FtsH protease HflC 0.55 MIT1002_03371 HTH-type transcriptional repressor FabR low > 70
Shewanella sp. ANA-3 0.48 Shewana3_0600 HflC protein (RefSeq) 0.65 Shewana3_0178 DNA-binding transcriptional repressor FabR (RefSeq) low > 73
Shewanella oneidensis MR-1 0.47 SO0606 hflC hflC protein (NCBI ptt file) 0.65 SO0198 transcriptional regulator, TetR family (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.46 Shew_0569 HflC protein (RefSeq) 0.65 Shew_0137 DNA-binding transcriptional repressor FabR (RefSeq) low > 60
Shewanella amazonensis SB2B 0.45 Sama_3022 hflC protein (RefSeq) 0.65 Sama_0192 DNA-binding transcriptional repressor FabR (RefSeq) 0.42 35
Kangiella aquimarina DSM 16071 0.34 B158DRAFT_1955 HflC protein 0.60 B158DRAFT_1831 transcriptional regulator, TetR family low > 40
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_1409 HflC protein 0.28 Pf1N1B4_1370 Unsaturated fatty acid biosythesis repressor FabR, TetR family
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_3611 HflC protein 0.27 Pf6N2E2_3568 Unsaturated fatty acid biosythesis repressor FabR, TetR family low > 103
Marinobacter adhaerens HP15 0.31 HP15_2496 HflC 0.56 HP15_2045 DNA-binding transcriptional repressor FabR low > 73
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_08640 membrane protease HflC 0.27 AO356_08445 TetR family transcriptional regulator low > 104
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_0575 protease FtsH subunit HflC 0.29 Psyr_4450 transcriptional regulator, TetR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_0575 protease FtsH subunit HflC 0.29 Psyr_4450 transcriptional regulator, TetR family low > 86
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS02585 protease modulator HflC 0.26 PFLU_RS02790 TetR family transcriptional regulator low > 109
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_151 HflC protein 0.28 PfGW456L13_110 Unsaturated fatty acid biosythesis repressor FabR, TetR family low > 87
Pseudomonas fluorescens SBW25 0.31 PFLU_RS02585 protease modulator HflC 0.26 PFLU_RS02790 TetR family transcriptional regulator low > 109
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_13160 membrane protease HflC 0.27 AO353_13415 TetR family transcriptional regulator low > 101
Pseudomonas sp. S08-1 0.29 OH686_09455 HflC protein 0.31 OH686_16690 Transcriptional regulator, AcrR family low > 80
Pseudomonas putida KT2440 0.29 PP_4891 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex 0.27 PP_4859 Transcriptional regulator, TetR family low > 96
Pseudomonas simiae WCS417 0.29 PS417_02505 membane protease HflC 0.27 PS417_02720 TetR family transcriptional regulator
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.3954.1 HflC protein 0.32 Xcc-8004.4923.1 Unsaturated fatty acid biosythesis repressor FabR, TetR family low > 74
Pseudomonas sp. RS175 0.28 PFR28_05124 Modulator of FtsH protease HflC 0.27 PFR28_05164 HTH-type transcriptional repressor FabR low > 88
Lysobacter sp. OAE881 0.28 ABIE51_RS06555 protease modulator HflC 0.28 ABIE51_RS00935 HTH-type transcriptional repressor FabR low > 62
Paraburkholderia graminis OAS925 0.23 ABIE53_002734 membrane protease subunit HflC 0.22 ABIE53_002363 AcrR family transcriptional regulator low > 113
Burkholderia phytofirmans PsJN 0.19 BPHYT_RS12540 membrane protein 0.21 BPHYT_RS11410 TetR family transcriptional regulator

Not shown: 35 genomes with orthologs for HER17_RS02600 only; 1 genomes with orthologs for HER17_RS00965 only