Conservation of cofitness between HEPCGN_08480 and HEPCGN_24000 in Escherichia coli ECOR38

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_08480 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 1.0 HEPCGN_24000 comR TetR family copper-responsive transcriptional repressor ComR 0.76 50
Escherichia coli ECRC98 1.00 JDDGAC_14095 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.98 JDDGAC_07145 comR TetR family copper-responsive transcriptional repressor ComR
Escherichia coli ECRC99 1.00 KEDOAH_17655 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.98 KEDOAH_24270 comR TetR family copper-responsive transcriptional repressor ComR
Escherichia coli ECOR27 1.00 NOLOHH_02845 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.98 NOLOHH_21010 comR TetR family copper-responsive transcriptional repressor ComR low > 75
Escherichia coli ECRC62 1.00 BNILDI_08765 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.98 BNILDI_19175 comR TetR family copper-responsive transcriptional repressor ComR low > 75
Escherichia coli ECRC102 1.00 NIAGMN_08350 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.98 NIAGMN_24345 comR TetR family copper-responsive transcriptional repressor ComR
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03547 Pyruvate dehydrogenase E1 component 0.98 OHPLBJKB_02555 HTH-type transcriptional repressor ComR
Escherichia coli BW25113 1.00 b0114 aceE pyruvate dehydrogenase subunit E1 (NCBI) 0.98 b1111 ycfQ orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC101 1.00 MCAODC_01015 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.98 MCAODC_22845 comR TetR family copper-responsive transcriptional repressor ComR
Escherichia coli Nissle 1917 1.00 ECOLIN_RS00640 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.98 ECOLIN_RS06410 TetR family copper-responsive transcriptional repressor ComR
Escherichia coli ECRC100 1.00 OKFHMN_10500 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.98 OKFHMN_03485 comR TetR family copper-responsive transcriptional repressor ComR
Escherichia fergusonii Becca 1.00 EFB2_03931 Pyruvate dehydrogenase E1 component 0.98 EFB2_02864 HTH-type transcriptional repressor ComR low > 86
Escherichia coli BL21 1.00 ECD_00113 pyruvate dehydrogenase, decarboxylase component E1, thiamine triphosphate-binding 0.98 ECD_01107 repressor for bhsA(ycfR)
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF122 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.81 GFF3394 putative transcriptional repressor 0.76 68
Klebsiella michiganensis M5al 0.96 BWI76_RS04880 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.76 BWI76_RS11190 putative TetR/AcrR family transcriptional regulatory protein
Enterobacter sp. TBS_079 0.95 MPMX20_00807 Pyruvate dehydrogenase E1 component 0.81 MPMX20_01792 HTH-type transcriptional repressor ComR low > 85
Enterobacter asburiae PDN3 0.95 EX28DRAFT_3710 pyruvate dehydrogenase E1 component, homodimeric type 0.80 EX28DRAFT_1819 transcriptional regulator, TetR family low > 76
Pantoea sp. MT58 0.92 IAI47_15810 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.52 IAI47_09720 TetR/AcrR family transcriptional regulator low > 76
Dickeya dianthicola ME23 0.91 DZA65_RS19000 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.19 DZA65_RS08485 TetR/AcrR family transcriptional regulator
Dickeya dianthicola 67-19 0.91 HGI48_RS17850 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.26 HGI48_RS05310 TetR/AcrR family transcriptional regulator
Rahnella sp. WP5 0.91 EX31_RS03480 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.49 EX31_RS23895 TetR/AcrR family transcriptional regulator low > 89
Serratia liquefaciens MT49 0.90 IAI46_21325 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.44 IAI46_07070 TetR/AcrR family transcriptional regulator low > 86
Shewanella amazonensis SB2B 0.74 Sama_0375 aceE pyruvate dehydrogenase subunit E1 (RefSeq) 0.17 Sama_2408 TetR family transcriptional regulator (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.74 CSW01_12220 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.15 CSW01_17160 TetR/AcrR family transcriptional regulator
Shewanella sp. ANA-3 0.69 Shewana3_0426 aceE pyruvate dehydrogenase subunit E1 (RefSeq) 0.26 Shewana3_1076 TetR family transcriptional regulator (RefSeq) low > 73
Shewanella loihica PV-4 0.69 Shew_3431 aceE pyruvate dehydrogenase subunit E1 (RefSeq) 0.17 Shew_2729 TetR family transcriptional regulator (RefSeq)
Shewanella oneidensis MR-1 0.69 SO0424 aceE pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase (NCBI ptt file) 0.25 SO3494 transcriptional regulator, TetR family (NCBI ptt file)
Dinoroseobacter shibae DFL-12 0.62 Dshi_1968 2-oxo-acid dehydrogenase E1 subunit, homodimeric type (RefSeq) 0.18 Dshi_1874 transcriptional regulator, TetR family (RefSeq) low > 64
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS07365 pyruvate dehydrogenase 0.33 RR42_RS21680 hypothetical protein low > 128
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_0518 2-oxo-acid dehydrogenase E1 component homodimeric type 0.21 Psyr_2927 transcriptional regulator, TetR family
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_0518 2-oxo-acid dehydrogenase E1 component homodimeric type 0.21 Psyr_2927 transcriptional regulator, TetR family
Pseudomonas sp. RS175 0.60 PFR28_05061 Pyruvate dehydrogenase E1 component 0.20 PFR28_02070 HTH-type transcriptional repressor ComR
Pseudomonas fluorescens SBW25 0.60 PFLU_RS02275 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.25 PFLU_RS15475 TetR/AcrR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS02275 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.25 PFLU_RS15475 TetR/AcrR family transcriptional regulator low > 109
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_12865 pyruvate dehydrogenase 0.23 AO353_28110 TetR family transcriptional regulator
Paraburkholderia graminis OAS925 0.59 ABIE53_002793 pyruvate dehydrogenase E1 component 0.22 ABIE53_005855 TetR/AcrR family transcriptional repressor of nem operon
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_00466 pyruvate dehydrogenase E1 component 0.24 H281DRAFT_01426 transcriptional regulator, TetR family
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS07305 pyruvate dehydrogenase 0.29 HSERO_RS21650 TetR family transcriptional regulator
Burkholderia phytofirmans PsJN 0.59 BPHYT_RS12840 pyruvate dehydrogenase 0.22 BPHYT_RS27145 TetR family transcriptional regulator low > 109
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS05725 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.28 QEN71_RS09555 TetR/AcrR family transcriptional regulator
Dyella japonica UNC79MFTsu3.2 0.56 ABZR86_RS12410 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.27 ABZR86_RS15890 TetR/AcrR family transcriptional regulator low > 74
Bosea sp. OAE506 0.08 ABIE41_RS08425 transketolase 0.22 ABIE41_RS18905 TetR/AcrR family transcriptional regulator low > 77
Phaeobacter inhibens DSM 17395 0.07 PGA1_c16590 transketolase-like protein 0.12 PGA1_262p01950 putative transcriptional regulator, TetR family low > 62
Azospirillum sp. SherDot2 0.07 MPMX19_03172 Pyruvate dehydrogenase E1 component 0.20 MPMX19_05796 HTH-type transcriptional repressor BdcR low > 112

Not shown: 33 genomes with orthologs for HEPCGN_08480 only; 9 genomes with orthologs for HEPCGN_24000 only