Conservation of cofitness between HEPCGN_20570 and HEPCGN_21865 in Escherichia coli ECOR38

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_20570 pdxJ pyridoxine 5'-phosphate synthase 1.0 HEPCGN_21865 pdxB 4-phosphoerythronate dehydrogenase PdxB 0.87 10
Escherichia coli BW25113 1.00 b2564 pdxJ pyridoxal phosphate biosynthetic protein (NCBI) 0.95 b2320 pdxB erythronate-4-phosphate dehydrogenase (NCBI) 0.92 2
Escherichia coli ECOR27 1.00 NOLOHH_13100 pdxJ pyridoxine 5'-phosphate synthase 0.99 NOLOHH_14295 pdxB 4-phosphoerythronate dehydrogenase PdxB 0.67 19
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01143 'Pyridoxine 5'-phosphate synthase' transl_table=11 0.98 OHPLBJKB_01385 Erythronate-4-phosphate dehydrogenase low > 73
Escherichia coli ECRC101 1.00 MCAODC_11955 pdxJ pyridoxine 5'-phosphate synthase 0.94 MCAODC_13700 pdxB 4-phosphoerythronate dehydrogenase PdxB 0.79 4
Escherichia coli ECRC100 1.00 OKFHMN_21425 pdxJ pyridoxine 5'-phosphate synthase 0.94 OKFHMN_22660 pdxB 4-phosphoerythronate dehydrogenase PdxB low > 80
Escherichia coli ECRC102 1.00 NIAGMN_19195 pdxJ pyridoxine 5'-phosphate synthase 0.94 NIAGMN_20435 pdxB 4-phosphoerythronate dehydrogenase PdxB — —
Escherichia coli ECRC62 1.00 BNILDI_11900 pdxJ pyridoxine 5'-phosphate synthase 0.99 BNILDI_13215 pdxB 4-phosphoerythronate dehydrogenase PdxB 0.82 41
Escherichia coli ECRC98 1.00 JDDGAC_25090 pdxJ pyridoxine 5'-phosphate synthase 0.94 JDDGAC_26620 pdxB 4-phosphoerythronate dehydrogenase PdxB — —
Escherichia coli BL21 1.00 ECD_02458 pyridoxine 5'-phosphate synthase 0.95 ECD_02245 erythronate-4-phosphate dehydrogenase — —
Escherichia coli ECRC99 0.99 KEDOAH_06795 pdxJ pyridoxine 5'-phosphate synthase 0.94 KEDOAH_05535 pdxB 4-phosphoerythronate dehydrogenase PdxB — —
Escherichia fergusonii Becca 0.99 EFB2_01332 Pyridoxine 5'-phosphate synthase 0.99 EFB2_01538 Erythronate-4-phosphate dehydrogenase low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS14515 pyridoxine 5'-phosphate synthase 0.99 ECOLIN_RS13445 4-phosphoerythronate dehydrogenase PdxB — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF2472 'Pyridoxine 5'-phosphate synthase (EC 2.6.99.2)' transl_table=11 0.88 GFF1936 Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290) — —
Klebsiella michiganensis M5al 0.93 BWI76_RS21305 pyridoxine 5'-phosphate synthase 0.82 BWI76_RS20390 erythronate-4-phosphate dehydrogenase — —
Enterobacter sp. TBS_079 0.93 MPMX20_03435 Pyridoxine 5'-phosphate synthase 0.82 MPMX20_03255 Erythronate-4-phosphate dehydrogenase 0.56 1
Enterobacter asburiae PDN3 0.92 EX28DRAFT_0082 pyridoxine 5'-phosphate synthase 0.83 EX28DRAFT_0284 Phosphoglycerate dehydrogenase and related dehydrogenases — —
Pectobacterium carotovorum WPP14 0.81 HER17_RS05830 pyridoxine 5'-phosphate synthase 0.68 HER17_RS06980 4-phosphoerythronate dehydrogenase PdxB low > 75
Dickeya dianthicola ME23 0.81 DZA65_RS16885 pyridoxine 5'-phosphate synthase 0.71 DZA65_RS15380 4-phosphoerythronate dehydrogenase PdxB 0.74 3
Dickeya dianthicola 67-19 0.81 HGI48_RS15805 pyridoxine 5'-phosphate synthase 0.68 HGI48_RS14445 4-phosphoerythronate dehydrogenase PdxB low > 71
Dickeya dadantii 3937 0.81 DDA3937_RS15720 pyridoxine 5'-phosphate synthase 0.72 DDA3937_RS14475 4-phosphoerythronate dehydrogenase PdxB 0.70 43
Pantoea sp. MT58 0.79 IAI47_04895 pyridoxine 5'-phosphate synthase 0.73 IAI47_06235 4-phosphoerythronate dehydrogenase PdxB 0.90 2
Rahnella sp. WP5 0.79 EX31_RS21850 pyridoxine 5'-phosphate synthase 0.70 EX31_RS19610 4-phosphoerythronate dehydrogenase PdxB 0.84 1
Serratia liquefaciens MT49 0.78 IAI46_19535 pyridoxine 5'-phosphate synthase 0.70 IAI46_17850 4-phosphoerythronate dehydrogenase PdxB — —
Erwinia tracheiphila SCR3 0.76 LU632_RS15370 pdxJ pyridoxine 5'-phosphate synthase 0.72 LU632_RS07815 DUF3410 domain-containing protein — —
Kangiella aquimarina DSM 16071 0.75 B158DRAFT_2190 pyridoxine 5'-phosphate synthase 0.39 B158DRAFT_1308 4-phosphoerythronate dehydrogenase (EC 1.1.1.290) — —
Alteromonas macleodii MIT1002 0.72 MIT1002_00791 Pyridoxine 5'-phosphate synthase 0.29 MIT1002_02532 Erythronate-4-phosphate dehydrogenase — —
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_12440 pyridoxine 5'-phosphate synthase 0.47 CSW01_10525 DUF3410 domain-containing protein — —
Shewanella loihica PV-4 0.67 Shew_1057 pyridoxal phosphate biosynthetic protein PdxJ (RefSeq) 0.41 Shew_2309 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) — —
Shewanella sp. ANA-3 0.67 Shewana3_3023 pyridoxine 5'-phosphate synthase (RefSeq) 0.41 Shewana3_1476 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region (RefSeq) — —
Shewanella oneidensis MR-1 0.67 SO1351 pdxJ pyridoxal phosphate biosynthetic protein PdxJ (NCBI ptt file) 0.41 SO3071 pdxB erythronate-4-phosphate dehydrogenase (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.66 Sama_0883 pyridoxine 5'-phosphate synthase (RefSeq) 0.41 Sama_2153 erythronate-4-phosphate dehydrogenase (RefSeq) — —
Pseudomonas sp. RS175 0.63 PFR28_03520 'Pyridoxine 5'-phosphate synthase' transl_table=11 0.38 PFR28_01103 Erythronate-4-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_889 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.40 Pf1N1B4_3893 Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290) — —
Pseudomonas sp. S08-1 0.63 OH686_20095 pyridoxine 5'-phosphate synthase 0.36 OH686_02070 Erythronate-4-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N2C3 0.63 AO356_17510 pyridoxine 5'-phosphate synthase 0.38 AO356_02365 erythronate-4-phosphate dehydrogenase — —
Pseudomonas putida KT2440 0.63 PP_1436 Pyridoxine 5'-phosphate synthase 0.37 PP_2117 Erythronate-4-phosphate dehydrogenase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_3948 pyridoxine 5'-phosphate synthase 0.43 Psyr_1828 4-phosphoerythronate dehydrogenase — —
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_3948 pyridoxine 5'-phosphate synthase 0.43 Psyr_1828 4-phosphoerythronate dehydrogenase — —
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_4837 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.40 PfGW456L13_4048 Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290) — —
Pseudomonas fluorescens FW300-N2E2 0.62 Pf6N2E2_5429 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.38 Pf6N2E2_2297 Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290) — —
Pseudomonas stutzeri RCH2 0.61 Psest_3089 pyridoxine 5'-phosphate synthase 0.36 Psest_2548 Phosphoglycerate dehydrogenase and related dehydrogenases — —
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_04495 pyridoxine 5'-phosphate synthase 0.40 AO353_00545 erythronate-4-phosphate dehydrogenase — —
Pseudomonas simiae WCS417 0.61 PS417_05205 pyridoxine 5'-phosphate synthase 0.40 PS417_07535 erythronate-4-phosphate dehydrogenase — —
Marinobacter adhaerens HP15 0.60 HP15_787 pyridoxal phosphate biosynthetic protein PdxJ 0.35 HP15_2098 erythronate-4-phosphate dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS05275 pyridoxine 5'-phosphate synthase 0.38 PFLU_RS07615 4-phosphoerythronate dehydrogenase PdxB — —
Pseudomonas fluorescens SBW25 0.60 PFLU_RS05275 pyridoxine 5'-phosphate synthase 0.38 PFLU_RS07615 4-phosphoerythronate dehydrogenase PdxB — —
Acinetobacter radioresistens SK82 0.60 MPMX26_02152 Pyridoxine 5'-phosphate synthase 0.29 MPMX26_02238 Erythronate-4-phosphate dehydrogenase — —
Bacteroides ovatus ATCC 8483 0.34 BACOVA_01142 pyridoxine 5'-phosphate synthase 0.33 BACOVA_01953 4-phosphoerythronate dehydrogenase 0.85 1
Bacteroides stercoris CC31F 0.33 HMPREF1181_RS06645 pyridoxine 5'-phosphate synthase 0.34 HMPREF1181_RS02440 4-phosphoerythronate dehydrogenase PdxB — —
Phocaeicola dorei CL03T12C01 0.33 ABI39_RS02500 pyridoxine 5'-phosphate synthase 0.34 ABI39_RS06250 4-phosphoerythronate dehydrogenase PdxB 0.97 1
Phocaeicola vulgatus CL09T03C04 0.33 HMPREF1058_RS08325 pyridoxine 5'-phosphate synthase 0.34 HMPREF1058_RS10820 4-phosphoerythronate dehydrogenase PdxB 0.97 1
Bacteroides thetaiotaomicron VPI-5482 0.33 BT3918 pyridoxal phosphate biosynthetic protein pdxJ (NCBI ptt file) 0.32 BT3361 erythronate-4-phosphate dehydrogenase (NCBI ptt file) 0.90 1
Parabacteroides merdae CL09T00C40 0.30 HMPREF1078_RS10265 pyridoxine 5'-phosphate synthase 0.32 HMPREF1078_RS19150 4-phosphoerythronate dehydrogenase PdxB low > 61

Not shown: 45 genomes with orthologs for HEPCGN_20570 only; 0 genomes with orthologs for HEPCGN_21865 only