Conservation of cofitness between HEPCGN_08095 and HEPCGN_17045 in Escherichia coli ECOR38

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_08095 rnhB ribonuclease HII 1.0 HEPCGN_17045 rlhA U32 family peptidase 0.50 18
Escherichia coli ECRC100 1.00 OKFHMN_10140 rnhB ribonuclease HII 1.00 OKFHMN_18170 rlhA U32 family peptidase low > 80
Escherichia coli ECRC99 1.00 KEDOAH_18015 rnhB ribonuclease HII 1.00 KEDOAH_09980 rlhA U32 family peptidase — —
Escherichia coli ECRC101 1.00 MCAODC_00655 rnhB ribonuclease HII 1.00 MCAODC_08690 rlhA U32 family peptidase low > 87
Escherichia coli ECRC102 1.00 NIAGMN_07990 rnhB ribonuclease HII 1.00 NIAGMN_15930 rlhA U32 family peptidase — —
Escherichia coli ECRC98 1.00 JDDGAC_13735 rnhB ribonuclease HII 0.99 JDDGAC_21795 rlhA U32 family peptidase low > 86
Escherichia fergusonii Becca 1.00 EFB2_03861 Ribonuclease HII 1.00 EFB2_00664 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS00995 ribonuclease HII 1.00 ECOLIN_RS18145 U32 family peptidase — —
Escherichia coli ECRC62 0.99 BNILDI_09185 rnhB ribonuclease HII 1.00 BNILDI_01560 rlhA U32 family peptidase low > 75
Escherichia coli BW25113 0.99 b0183 rnhB ribonuclease HII (NCBI) 0.99 b3159 yhbV orf, hypothetical protein (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03480 Ribonuclease HII 1.00 OHPLBJKB_00541 hypothetical protein low > 73
Escherichia coli ECOR27 0.99 NOLOHH_02485 rnhB ribonuclease HII 0.99 NOLOHH_09970 rlhA U32 family peptidase low > 75
Escherichia coli BL21 0.98 ECD_00181 ribonuclease HII 0.99 ECD_03026 U32 peptidase family protein low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF39 Ribonuclease HII (EC 3.1.26.4) 0.94 GFF1509 FIG139928: Putative protease low > 78
Enterobacter sp. TBS_079 0.92 MPMX20_00867 Ribonuclease HII 0.92 MPMX20_04063 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.91 EX28DRAFT_3771 RNase HII (EC 3.1.26.4) 0.95 EX28DRAFT_3208 Collagenase and related proteases low > 76
Klebsiella michiganensis M5al 0.87 BWI76_RS05285 ribonuclease HII 0.93 BWI76_RS24975 U32 family peptidase — —
Serratia liquefaciens MT49 0.83 IAI46_20190 ribonuclease HII 0.80 IAI46_02010 U32 family peptidase low > 86
Pantoea sp. MT58 0.81 IAI47_15460 ribonuclease HII 0.74 IAI47_16970 U32 family peptidase low > 76
Dickeya dadantii 3937 0.80 DDA3937_RS05185 ribonuclease HII 0.81 DDA3937_RS03110 U32 family peptidase low > 74
Pectobacterium carotovorum WPP14 0.80 HER17_RS16265 ribonuclease HII 0.80 HER17_RS18165 U32 family peptidase low > 75
Rahnella sp. WP5 0.79 EX31_RS12965 ribonuclease HII 0.80 EX31_RS08485 U32 family peptidase low > 89
Dickeya dianthicola 67-19 0.79 HGI48_RS05185 ribonuclease HII 0.80 HGI48_RS03285 U32 family peptidase — —
Dickeya dianthicola ME23 0.79 DZA65_RS05525 ribonuclease HII 0.78 DZA65_RS03280 U32 family peptidase — —
Erwinia tracheiphila SCR3 0.76 LU632_RS19895 rnhB ribonuclease HII 0.73 LU632_RS21010 U32 family peptidase — —
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_11440 ribonuclease HII 0.68 CSW01_03430 U32 family peptidase low > 62
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_16530 ribonuclease HII 0.47 AO353_22055 protease low > 101
Pseudomonas simiae WCS417 0.66 PS417_06280 ribonuclease HII 0.48 PS417_15750 protease low > 88
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_05970 ribonuclease HII 0.47 AO356_25165 protease low > 104
Pseudomonas fluorescens FW300-N1B4 0.65 Pf1N1B4_3098 Ribonuclease HII (EC 3.1.26.4) 0.47 Pf1N1B4_5745 FIG139928: Putative protease 0.28 65
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_3055 Ribonuclease HII (EC 3.1.26.4) 0.47 Pf6N2E2_722 FIG139928: Putative protease low > 103
Pseudomonas sp. RS175 0.65 PFR28_00410 Ribonuclease HII 0.47 PFR28_02213 hypothetical protein — —
Pseudomonas stutzeri RCH2 0.63 Psest_2828 Ribonuclease HII 0.46 Psest_0836 Collagenase and related proteases — —
Shewanella sp. ANA-3 0.60 Shewana3_2801 rnhB ribonuclease HII (RefSeq) 0.44 Shewana3_1064 peptidase U32 (RefSeq) low > 73
Dechlorosoma suillum PS 0.60 Dsui_2680 ribonuclease HII 0.39 Dsui_0963 collagenase-like protease low > 51
Shewanella oneidensis MR-1 0.59 SO1643 rnhB ribonuclease HII (NCBI ptt file) 0.44 SO1248 hypothetical peptidase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.59 Sama_1153 rnhB ribonuclease HII (RefSeq) 0.40 Sama_0997 peptidase U32 (RefSeq) low > 62
Shewanella loihica PV-4 0.59 Shew_2621 ribonuclease H (RefSeq) 0.44 Shew_2788 peptidase U32 (RefSeq) low > 60
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_1094 RNase HII (EC 3.1.26.4) 0.38 B158DRAFT_2374 Collagenase and related proteases low > 40
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS11805 ribonuclease HII 0.31 RR42_RS08780 protease low > 128
Castellaniella sp019104865 MT123 0.52 ABCV34_RS04040 ribonuclease HII 0.38 ABCV34_RS06415 U32 family peptidase low > 48
Acidovorax sp. GW101-3H11 0.51 Ac3H11_432 Ribonuclease HII (EC 3.1.26.4) 0.38 Ac3H11_4295 FIG139928: Putative protease low > 79
Magnetospirillum magneticum AMB-1 0.40 AMB_RS20190 ribonuclease HII 0.25 AMB_RS02525 U32 family peptidase low > 64
Azospirillum sp. SherDot2 0.39 MPMX19_05650 Ribonuclease HII 0.23 MPMX19_03050 hypothetical protein low > 112
Rhodospirillum rubrum S1H 0.38 Rru_A3209 Ribonuclease H (NCBI) 0.22 Rru_A2524 Peptidase U32 (NCBI) — —
Azospirillum brasilense Sp245 0.37 AZOBR_RS20300 ribonuclease HII 0.23 AZOBR_RS28240 protease low > 97

Not shown: 43 genomes with orthologs for HEPCGN_08095 only; 5 genomes with orthologs for HEPCGN_17045 only