Conservation of cofitness between Ga0059261_1960 and Ga0059261_1984 in Sphingomonas koreensis DSMZ 15582

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingomonas koreensis DSMZ 15582 1.0 Ga0059261_1960 negative transcriptional regulator, PaiB family 1.0 Ga0059261_1984 rRNA methylase 0.42 3
Dickeya dadantii 3937 0.56 DDA3937_RS07550 FMN-binding negative transcriptional regulator 0.22 DDA3937_RS15555 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ low > 74
Bosea sp. OAE506 0.51 ABIE41_RS19955 FMN-binding negative transcriptional regulator 0.44 ABIE41_RS13540 RNA methyltransferase low > 77
Rhodanobacter denitrificans MT42 0.51 LRK55_RS02165 FMN-binding negative transcriptional regulator 0.25 LRK55_RS12670 RNA methyltransferase low > 63
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_09475 paiB transcriptional regulator 0.24 OKGIIK_02340 trmJ RNA methyltransferase low > 52
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS02410 FMN-binding negative transcriptional regulator 0.25 LRK54_RS12970 RNA methyltransferase low > 59
Serratia liquefaciens MT49 0.50 IAI46_07485 FMN-binding negative transcriptional regulator 0.24 IAI46_19365 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ low > 86
Rhizobium sp. OAE497 0.49 ABIE40_RS00175 FMN-binding negative transcriptional regulator 0.43 ABIE40_RS10270 RNA methyltransferase low > 107
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS08725 FMN-binding negative transcriptional regulator 0.24 ABZR86_RS19895 RNA methyltransferase low > 74
Ralstonia solanacearum UW163 0.45 UW163_RS18925 FMN-binding negative transcriptional regulator 0.17 UW163_RS12440 RNA methyltransferase — —
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS20250 FMN-binding negative transcriptional regulator 0.17 RALBFv3_RS14970 RNA methyltransferase low > 76
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS34120 transcriptional regulator 0.21 BPHYT_RS12460 RNA methyltransferase low > 109
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS20860 FMN-binding negative transcriptional regulator 0.16 ABZR87_RS10615 RNA methyltransferase low > 80
Ralstonia solanacearum PSI07 0.44 RPSI07_RS02610 FMN-binding negative transcriptional regulator 0.20 RPSI07_RS18405 RNA methyltransferase low > 81
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_732 Transcriptional regulator 0.22 PfGW456L13_4876 tRNA:Cm32/Um32 methyltransferase low > 87
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS17335 FMN-binding negative transcriptional regulator 0.22 QEN71_RS06100 RNA methyltransferase low > 153
Paraburkholderia graminis OAS925 0.44 ABIE53_000956 transcriptional regulator 0.21 ABIE53_002713 tRNA/rRNA methyltransferase 0.20 65
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_04802 negative transcriptional regulator, PaiB family 0.22 H281DRAFT_00540 tRNA/rRNA methyltransferase low > 103
Pseudomonas sp. S08-1 0.43 OH686_13305 FMN-binding negative transcriptional regulator 0.23 OH686_17460 tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase low > 80
Ralstonia solanacearum GMI1000 0.43 RS_RS20425 FMN-binding negative transcriptional regulator 0.20 RS_RS05785 RNA methyltransferase low > 80
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_09995 transcriptional regulator 0.22 AO353_15820 RNA methyltransferase low > 101
Pseudomonas fluorescens SBW25-INTG 0.42 PFLU_RS29855 FMN-binding negative transcriptional regulator 0.22 PFLU_RS24870 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ low > 109
Pseudomonas fluorescens SBW25 0.42 PFLU_RS29855 FMN-binding negative transcriptional regulator 0.22 PFLU_RS24870 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ low > 109
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_12065 transcriptional regulator 0.21 AO356_06660 RNA methyltransferase low > 104
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF5067 Transcriptional regulator 0.22 GFF3650 tRNA:Cm32/Um32 methyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.41 Psyr_5057 negative transcriptional regulator 0.22 Psyr_1234 RNA methyltransferase TrmH, group 1 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.41 Psyr_5057 negative transcriptional regulator 0.22 Psyr_1234 RNA methyltransferase TrmH, group 1 low > 86
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_4287 Transcriptional regulator 0.22 Pf6N2E2_3192 tRNA:Cm32/Um32 methyltransferase low > 103
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_2017 Transcriptional regulator 0.22 Pf1N1B4_868 tRNA:Cm32/Um32 methyltransferase low > 87
Azospirillum sp. SherDot2 0.40 MPMX19_05399 Protease synthase and sporulation protein PAI 2 0.46 MPMX19_02031 tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ low > 112
Pseudomonas sp. RS175 0.40 PFR28_04509 Protease synthase and sporulation protein PAI 2 0.21 PFR28_00283 'tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ' transl_table=11 low > 88
Variovorax sp. OAS795 0.39 ABID97_RS13330 FMN-binding negative transcriptional regulator 0.20 ABID97_RS20730 RNA methyltransferase low > 91
Pseudomonas simiae WCS417 0.39 PS417_28170 transcriptional regulator 0.22 PS417_23215 RNA methyltransferase low > 88
Variovorax sp. SCN45 0.38 GFF4229 Transcriptional regulator 0.20 GFF4680 tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase (EC 2.1.1.200) low > 127
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS22615 transcriptional regulator 0.25 HSERO_RS08585 RNA methyltransferase low > 78
Acidovorax sp. GW101-3H11 0.38 Ac3H11_4235 Transcriptional regulator 0.20 Ac3H11_3646 tRNA:Cm32/Um32 methyltransferase low > 79
Pseudomonas putida KT2440 0.35 PP_5343 putative Transcriptional regulator 0.23 PP_0839 tRNA Cm32/Um32 methyltransferase low > 96
Lysobacter sp. OAE881 0.24 ABIE51_RS12645 FMN-binding negative transcriptional regulator 0.23 ABIE51_RS14985 RNA methyltransferase low > 62
Xanthomonas campestris pv. campestris strain 8004 0.22 Xcc-8004.3323.1 transcriptional regulator protein Pai2 0.23 Xcc-8004.2282.1 tRNA:Cm32/Um32 methyltransferase low > 74
Caulobacter crescentus NA1000 Δfur 0.22 CCNA_02649 PaiB transcriptional regulator 0.42 CCNA_02605 LasT-family rRNA methylase low > 67
Caulobacter crescentus NA1000 0.22 CCNA_02649 PaiB transcriptional regulator 0.42 CCNA_02605 LasT-family rRNA methylase low > 66

Not shown: 3 genomes with orthologs for Ga0059261_1960 only; 45 genomes with orthologs for Ga0059261_1984 only