Conservation of cofitness between PS417_27710 and PS417_04915 in Pseudomonas simiae WCS417

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_27710 AsnC family transcriptional regulator 1.0 PS417_04915 glutamine ABC transporter ATP-binding protein 0.22 19
Pseudomonas fluorescens SBW25 1.00 PFLU_RS29385 AsnC family transcriptional regulator 1.00 PFLU_RS04975 amino acid ABC transporter ATP-binding protein low > 109
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS29385 AsnC family transcriptional regulator 1.00 PFLU_RS04975 amino acid ABC transporter ATP-binding protein low > 109
Pseudomonas fluorescens FW300-N1B4 1.00 Pf1N1B4_2143 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 1.00 Pf1N1B4_914 ABC-type polar amino acid transport system, ATPase component low > 87
Pseudomonas sp. RS175 1.00 PFR28_04400 Leucine-responsive regulatory protein 0.99 PFR28_03539 Glutamine transport ATP-binding protein GlnQ low > 88
Pseudomonas fluorescens FW300-N2E3 1.00 AO353_09160 AsnC family transcriptional regulator 1.00 AO353_04600 glutamine ABC transporter ATP-binding protein low > 101
Pseudomonas fluorescens FW300-N2E2 0.99 Pf6N2E2_4390 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 1.00 Pf6N2E2_5405 ABC transporter for D-Alanine, ATPase component (from data) 0.21 24
Pseudomonas fluorescens GW456-L13 0.99 PfGW456L13_811 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.99 PfGW456L13_1701 ABC-type polar amino acid transport system, ATPase component 0.30 38
Pseudomonas fluorescens FW300-N2C3 0.99 AO356_12615 AsnC family transcriptional regulator 0.99 AO356_17395 glutamine ABC transporter ATP-binding protein low > 104
Pseudomonas putida KT2440 0.97 PP_5271 DNA-binding transcriptional dual regulator, leucine-binding 0.97 PP_1300 putative amino acid ABC transporter - ATP-binding subunit low > 96
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_0234 transcriptional regulator, AsnC family 0.94 Psyr_1075 amino acid ABC transporter ATP-binding protein, PAAT family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_0234 transcriptional regulator, AsnC family 0.94 Psyr_1075 amino acid ABC transporter ATP-binding protein, PAAT family low > 86
Pseudomonas sp. S08-1 0.93 OH686_13680 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.90 OH686_17820 Amino acid ABC transporter, ATP-binding protein YhdZ low > 80
Pseudomonas stutzeri RCH2 0.91 Psest_3794 Transcriptional regulators 0.88 Psest_3160 ABC-type polar amino acid transport system, ATPase component
Paraburkholderia sabiae LMG 24235 0.69 QEN71_RS04195 Lrp/AsnC ligand binding domain-containing protein 0.67 QEN71_RS40280 amino acid ABC transporter ATP-binding protein
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS09565 Lrp/AsnC ligand binding domain-containing protein 0.59 ABZR87_RS15830 amino acid ABC transporter ATP-binding protein low > 80
Ralstonia solanacearum PSI07 0.68 RPSI07_RS19595 AsnC family transcriptional regulator 0.57 RPSI07_RS13330 amino acid ABC transporter ATP-binding protein
Cupriavidus basilensis FW507-4G11 0.67 RR42_RS04590 AsnC family transcriptional regulator 0.68 RR42_RS16370 glutamine ABC transporter ATP-binding protein low > 128
Ralstonia solanacearum UW163 0.66 UW163_RS15935 AsnC family transcriptional regulator 0.58 UW163_RS09770 amino acid ABC transporter ATP-binding protein
Ralstonia solanacearum IBSBF1503 0.66 RALBFv3_RS13875 AsnC family transcriptional regulator 0.57 RALBFv3_RS03900 amino acid ABC transporter ATP-binding protein low > 76
Ralstonia solanacearum GMI1000 0.65 RS_RS04610 AsnC family transcriptional regulator 0.58 RS_RS11345 amino acid ABC transporter ATP-binding protein
Castellaniella sp019104865 MT123 0.63 ABCV34_RS10805 winged helix-turn-helix transcriptional regulator 0.70 ABCV34_RS08630 amino acid ABC transporter ATP-binding protein low > 48
Variovorax sp. SCN45 0.61 GFF1774 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.75 GFF1877 ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines)
Variovorax sp. OAS795 0.61 ABID97_RS22380 winged helix-turn-helix transcriptional regulator 0.74 ABID97_RS20040 amino acid ABC transporter ATP-binding protein low > 91
Vibrio cholerae E7946 ATCC 55056 0.60 CSW01_09530 leucine-responsive transcriptional regulator Lrp 0.78 CSW01_06840 amino acid ABC transporter ATP-binding protein
Pantoea sp. MT58 0.59 IAI47_12915 leucine-responsive transcriptional regulator Lrp 0.81 IAI47_02360 amino acid ABC transporter ATP-binding protein low > 76
Erwinia tracheiphila SCR3 0.59 LU632_RS09740 lrp leucine-responsive transcriptional regulator Lrp 0.81 LU632_RS19785 amino acid ABC transporter ATP-binding protein low > 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_02779 Leucine-responsive regulatory protein 0.82 OHPLBJKB_00432 Glutamine transport ATP-binding protein GlnQ low > 73
Escherichia coli ECRC101 0.59 MCAODC_24965 lrp leucine-responsive transcriptional regulator Lrp 0.82 MCAODC_08140 yhdZ Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ
Escherichia coli BW25113 0.59 b0889 lrp DNA-binding transcriptional dual regulator, leucine-binding (NCBI) 0.82 b3271 yhdZ predicted amino-acid transporter subunit (NCBI) low > 76
Escherichia coli BL21 0.59 ECD_00893 leucine-responsive global transcriptional regulator 0.82 ECD_03129 putative amino acid ABC transporter ATPase low > 60
Dickeya dadantii 3937 0.59 DDA3937_RS09590 leucine-responsive transcriptional regulator Lrp 0.82 DDA3937_RS01255 amino acid ABC transporter ATP-binding protein low > 74
Escherichia coli ECOR27 0.59 NOLOHH_22145 lrp leucine-responsive transcriptional regulator Lrp 0.82 NOLOHH_09410 yhdZ Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ low > 57
Enterobacter sp. TBS_079 0.59 MPMX20_01551 Leucine-responsive regulatory protein 0.82 MPMX20_04180 Glutamine transport ATP-binding protein GlnQ low > 85
Enterobacter asburiae PDN3 0.59 EX28DRAFT_2043 transcriptional regulator, AsnC family 0.82 EX28DRAFT_3324 ABC-type polar amino acid transport system, ATPase component low > 76
Dickeya dianthicola 67-19 0.59 HGI48_RS09605 leucine-responsive transcriptional regulator Lrp 0.81 HGI48_RS01240 amino acid ABC transporter ATP-binding protein low > 71
Pectobacterium carotovorum WPP14 0.59 HER17_RS12360 leucine-responsive transcriptional regulator Lrp 0.81 HER17_RS20305 amino acid ABC transporter ATP-binding protein 0.72 18
Escherichia coli ECRC62 0.59 BNILDI_20400 lrp leucine-responsive transcriptional regulator Lrp 0.82 BNILDI_02110 yhdZ Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ
Escherichia fergusonii Becca 0.59 EFB2_03172 Leucine-responsive regulatory protein 0.82 EFB2_00552 Glutamine transport ATP-binding protein GlnQ low > 86
Escherichia coli ECRC99 0.59 KEDOAH_22160 lrp leucine-responsive transcriptional regulator Lrp 0.82 KEDOAH_10530 yhdZ Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ
Escherichia coli ECOR38 0.59 HEPCGN_22935 lrp leucine-responsive transcriptional regulator Lrp 0.81 HEPCGN_16440 ABC transporter ATP-binding protein low > 85
Escherichia coli Nissle 1917 0.59 ECOLIN_RS04730 leucine-responsive transcriptional regulator Lrp 0.82 ECOLIN_RS18790 amino acid ABC transporter ATP-binding protein low > 52
Escherichia coli ECRC101 0.59 OKFHMN_05575 lrp leucine-responsive transcriptional regulator Lrp 0.82 OKFHMN_17620 yhdZ Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ
Dickeya dianthicola ME23 0.59 DZA65_RS09915 leucine-responsive transcriptional regulator Lrp 0.81 DZA65_RS01285 amino acid ABC transporter ATP-binding protein low > 75
Escherichia coli ECRC98 0.59 JDDGAC_09385 lrp leucine-responsive transcriptional regulator Lrp 0.82 JDDGAC_21240 yhdZ Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ
Escherichia coli ECRC102 0.59 NIAGMN_03295 lrp leucine-responsive transcriptional regulator Lrp 0.82 NIAGMN_15380 yhdZ Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ
Rahnella sp. WP5 0.59 EX31_RS18530 leucine-responsive transcriptional regulator Lrp 0.81 EX31_RS12140 amino acid ABC transporter ATP-binding protein low > 89
Azospirillum brasilense Sp245 0.54 AZOBR_RS23685 AsnC family transcriptional regulator 0.81 AZOBR_RS08670 arginine ABC transporter ATP-binding protein 0.20 45
Bosea sp. OAE506 0.52 ABIE41_RS07920 Lrp/AsnC ligand binding domain-containing protein 0.79 ABIE41_RS16010 amino acid ABC transporter ATP-binding protein low > 77
Sinorhizobium meliloti 1021 0.51 SMc00681 leucine-responsive regulatory protein 0.81 SMc02121 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, ATPase component (from data) low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF2725 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.68 GFF1640 amino acid ABC transporter, ATP-binding protein
Azospirillum sp. SherDot2 0.47 MPMX19_03947 Leucine-responsive regulatory protein 0.81 MPMX19_01335 Glutamine transport ATP-binding protein GlnQ 0.52 91
Marinobacter adhaerens HP15 0.43 HP15_2690 transcriptional regulator, AsnC family 0.77 HP15_2193 amino-acid ABC transporter ATP-binding protein-like protein low > 73
Agrobacterium fabrum C58 0.41 Atu4159 AsnC family transcriptional regulator 0.83 Atu1580 ABC transporter, nucleotide binding/ATPase protein (amino acid) low > 89
Rhizobium sp. OAE497 0.39 ABIE40_RS23450 Lrp/AsnC family transcriptional regulator 0.82 ABIE40_RS08800 amino acid ABC transporter ATP-binding protein low > 107
Phaeobacter inhibens DSM 17395 0.37 PGA1_c11760 putative proline dehydrogenase transcriptional activator 0.79 PGA1_c02010 glutamate/glutamine/aspartate/asparagine transport ATP-binding protein BztD low > 62

Not shown: 23 genomes with orthologs for PS417_27710 only; 7 genomes with orthologs for PS417_04915 only