Conservation of cofitness between PS417_20020 and PS417_04275 in Pseudomonas simiae WCS417

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_20020 cobalamin synthase 1.0 PS417_04275 hypothetical protein 0.28 18
Pseudomonas fluorescens SBW25 0.82 PFLU_RS21985 adenosylcobinamide-GDP ribazoletransferase 0.94 PFLU_RS04330 TIGR02099 family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.82 PFLU_RS21985 adenosylcobinamide-GDP ribazoletransferase 0.94 PFLU_RS04330 TIGR02099 family protein low > 109
Pseudomonas sp. RS175 0.75 PFR28_03200 Adenosylcobinamide-GDP ribazoletransferase 0.74 PFR28_00159 hypothetical protein low > 88
Pseudomonas fluorescens GW456-L13 0.72 PfGW456L13_4234 Cobalamin synthase 0.77 PfGW456L13_5028 FIG005080: Possible exported protein low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_3672 cobalamin-5'-phosphate synthase 0.72 Psyr_4158 conserved hypothetical protein low > 86
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_3672 cobalamin-5'-phosphate synthase 0.72 Psyr_4158 conserved hypothetical protein low > 86
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_02595 cobalamin synthase 0.79 AO353_05225 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_19180 cobalamin synthase 0.75 AO356_07105 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_5746 Cobalamin synthase 0.75 Pf6N2E2_3282 FIG005080: Possible exported protein low > 103
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_3715 Cobalamin synthase 0.79 Pf1N1B4_1094 FIG005080: Possible exported protein low > 87
Pseudomonas putida KT2440 0.53 PP_1681 cobalamin 5'-phosphate synthase / Cobalamin synthase 0.64 PP_0938 conserved protein of unknown function low > 96
Pseudomonas sp. S08-1 0.46 OH686_04945 cobalamin 5'-phosphate synthase 0.56 OH686_08590 Possible exported protein — —
Pseudomonas stutzeri RCH2 0.42 Psest_3004 cobalamin 5'-phosphate synthase/cobalamin synthase 0.54 Psest_3322 TIGR02099 family protein low > 67
Lysobacter sp. OAE881 0.38 ABIE51_RS04985 adenosylcobinamide-GDP ribazoletransferase 0.08 ABIE51_RS06790 YhdP family protein low > 62
Dyella japonica UNC79MFTsu3.2 0.36 ABZR86_RS10880 adenosylcobinamide-GDP ribazoletransferase 0.09 ABZR86_RS21725 YhdP family protein low > 74
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_05520 adenosylcobinamide-GDP ribazoletransferase 0.08 OKGIIK_10285 TIGR02099 family protein — —
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.1400.1 Cobalamin synthase (EC 2.7.8.26) 0.07 Xcc-8004.1881.1 FIG005080: Possible exported protein low > 74
Escherichia coli ECRC99 0.22 KEDOAH_02980 cobS adenosylcobinamide-GDP ribazoletransferase 0.08 KEDOAH_10400 yhdP AsmA2 domain-containing protein YhdP — —
Escherichia coli ECRC101 0.22 MCAODC_20260 cobS adenosylcobinamide-GDP ribazoletransferase 0.08 MCAODC_08270 yhdP AsmA2 domain-containing protein YhdP — —
Escherichia coli ECRC101 0.22 OKFHMN_25130 cobS adenosylcobinamide-GDP ribazoletransferase 0.08 OKFHMN_17750 yhdP AsmA2 domain-containing protein YhdP — —
Escherichia coli ECRC102 0.22 NIAGMN_22635 cobS adenosylcobinamide-GDP ribazoletransferase 0.08 NIAGMN_15510 yhdP AsmA2 domain-containing protein YhdP — —
Escherichia coli ECRC62 0.22 BNILDI_14870 cobS adenosylcobinamide-GDP ribazoletransferase 0.08 BNILDI_01985 yhdP AsmA2 domain-containing protein YhdP — —
Escherichia coli ECRC98 0.22 JDDGAC_29260 cobS adenosylcobinamide-GDP ribazoletransferase 0.08 JDDGAC_21375 yhdP AsmA2 domain-containing protein YhdP — —
Escherichia coli ECOR27 0.21 NOLOHH_16040 cobS adenosylcobinamide-GDP ribazoletransferase 0.08 NOLOHH_09535 yhdP AsmA2 domain-containing protein YhdP low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_01716 Adenosylcobinamide-GDP ribazoletransferase 0.08 OHPLBJKB_00459 hypothetical protein low > 73
Escherichia coli BW25113 0.21 b1992 cobS cobalamin synthase (NCBI) 0.08 b4472 yhdP conserved membrane protein, predicted transporter (NCBI) low > 76
Escherichia fergusonii Becca 0.21 EFB2_01897 Adenosylcobinamide-GDP ribazoletransferase 0.08 EFB2_00585 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.21 ECOLIN_RS11625 adenosylcobinamide-GDP ribazoletransferase 0.08 ECOLIN_RS18600 AsmA2 domain-containing protein YhdP low > 52
Escherichia coli ECOR38 0.21 HEPCGN_03465 cobS adenosylcobinamide-GDP ribazoletransferase 0.08 HEPCGN_16615 yhdP AsmA2 domain-containing protein YhdP low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.21 GFF3968 Cobalamin synthase (EC 2.7.8.26) 0.09 GFF2139 FIG005080: Possible exported protein low > 78
Escherichia coli BL21 0.21 ECD_01901 cobalamin synthase 0.08 ECD_03105 DUF3971-AsmA2 domains protein low > 60
Klebsiella michiganensis M5al 0.20 BWI76_RS18750 adenosylcobinamide-GDP ribazoletransferase 0.08 BWI76_RS25475 TIGR02099 family protein — —
Paraburkholderia sabiae LMG 24235 0.19 QEN71_RS25125 adenosylcobinamide-GDP ribazoletransferase 0.05 QEN71_RS26545 AsmA-like C-terminal region-containing protein low > 153
Shewanella oneidensis MR-1 0.18 SO1036 cobS cobalamin 5'-phosphate synthase (NCBI ptt file) 0.08 SO4093 conserved hypothetical protein (NCBI ptt file) low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.18 GFF4000 Cobalamin synthase 0.06 GFF2534 FIG005080: Possible exported protein low > 90
Burkholderia phytofirmans PsJN 0.17 BPHYT_RS04870 cobalamin synthase 0.05 BPHYT_RS03550 hypothetical protein low > 109
Vibrio cholerae E7946 ATCC 55056 0.16 CSW01_06265 adenosylcobinamide-GDP ribazoletransferase 0.07 CSW01_02210 DUF3971 domain-containing protein low > 62
Shewanella sp. ANA-3 0.16 Shewana3_3277 cobS cobalamin synthase (RefSeq) 0.08 Shewana3_3643 hypothetical protein (RefSeq) low > 73
Paraburkholderia bryophila 376MFSha3.1 0.16 H281DRAFT_00140 cobalamin-5'-phosphate synthase 0.06 H281DRAFT_04690 TIGR02099 family protein low > 103
Ralstonia solanacearum PSI07 0.15 RPSI07_RS12895 adenosylcobinamide-GDP ribazoletransferase 0.06 RPSI07_RS11860 TIGR02099 family protein low > 81
Ralstonia solanacearum UW163 0.15 UW163_RS09195 adenosylcobinamide-GDP ribazoletransferase 0.07 UW163_RS08180 TIGR02099 family protein — —
Ralstonia solanacearum IBSBF1503 0.15 RALBFv3_RS04475 adenosylcobinamide-GDP ribazoletransferase 0.07 RALBFv3_RS05445 TIGR02099 family protein low > 76
Ralstonia solanacearum GMI1000 0.15 RS_RS12030 adenosylcobinamide-GDP ribazoletransferase 0.06 RS_RS13305 TIGR02099 family protein low > 80
Ralstonia sp. UNC404CL21Col 0.15 ABZR87_RS00070 adenosylcobinamide-GDP ribazoletransferase 0.06 ABZR87_RS01095 YhdP family protein low > 80
Dechlorosoma suillum PS 0.13 Dsui_0471 cobalamin 5''-phosphate synthase/cobalamin synthase 0.08 Dsui_3403 TIGR02099 family protein — —
Variovorax sp. SCN45 0.12 GFF424 Cobalamin synthase (EC 2.7.8.26) 0.06 GFF5444 FIG005080: Possible exported protein low > 127

Not shown: 16 genomes with orthologs for PS417_20020 only; 14 genomes with orthologs for PS417_04275 only