Conservation of cofitness between GFF3048 and GFF785 in Sphingobium sp. HT1-2

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF3048 Two-component nitrogen fixation transcriptional regulator FixJ 1.0 GFF785 Ammonium transporter 0.93 2
Sinorhizobium meliloti 1021 0.48 SMa1227 response regulator FixJ 0.49 SMc03807 ammonium transporter low > 103
Rhodopseudomonas palustris CGA009 0.45 TX73_022010 response regulator FixJ 0.50 TX73_001435 ammonium transporter — —
Azospirillum sp. SherDot2 0.44 MPMX19_03016 Response regulator protein TmoT 0.42 MPMX19_02223 Ammonia channel — —
Marinobacter adhaerens HP15 0.44 HP15_1053 two component transcriptional regulator, LuxR family 0.16 HP15_274 ammonium/methylammonium permease low > 73
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS07355 LuxR family transcriptional regulator 0.47 RR42_RS01760 ammonia channel protein — —
Dechlorosoma suillum PS 0.41 Dsui_2511 response regulator 0.44 Dsui_0763 ammonium transporter low > 51
Paraburkholderia sabiae LMG 24235 0.41 QEN71_RS05715 oxygen response regulator transcription factor FixJ 0.42 QEN71_RS01405 ammonium transporter — —
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS13480 response regulator transcription factor 0.49 ABZR87_RS06700 ammonium transporter — —
Ralstonia solanacearum PSI07 0.41 RPSI07_RS15805 DNA-binding response regulator 0.49 RPSI07_RS22460 ammonia channel protein — —
Ralstonia solanacearum UW163 0.41 UW163_RS14990 DNA-binding response regulator 0.49 UW163_RS02730 ammonia channel protein — —
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS01680 DNA-binding response regulator 0.49 RALBFv3_RS10850 ammonia channel protein — —
Ralstonia solanacearum GMI1000 0.41 RS_RS08045 DNA-binding response regulator 0.49 RS_RS01690 ammonium transporter low > 80
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_00464 two component transcriptional regulator, LuxR family 0.43 H281DRAFT_02012 ammonium transporter — —
Paraburkholderia graminis OAS925 0.41 ABIE53_002795 FixJ family two-component response regulator 0.43 ABIE53_000655 Amt family ammonium transporter — —
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS12850 LuxR family transcriptional regulator 0.42 BPHYT_RS02550 ammonia channel protein — —
Shewanella loihica PV-4 0.41 Shew_3240 two component LuxR family transcriptional regulator (RefSeq) 0.15 Shew_0847 Rh family protein/ammonium transporter (RefSeq) low > 60
Castellaniella sp019104865 MT123 0.41 ABCV34_RS04170 response regulator transcription factor 0.40 ABCV34_RS04770 ammonium transporter — —
Brevundimonas sp. GW460-12-10-14-LB2 0.41 A4249_RS15535 response regulator 0.36 A4249_RS09990 ammonium transporter — —
Shewanella oneidensis MR-1 0.39 SO4157 DNA-binding response regulator (NCBI ptt file) 0.15 SO0760 amt ammonium transporter (NCBI ptt file) low > 76
Variovorax sp. OAS795 0.39 ABID97_RS14090 response regulator transcription factor 0.44 ABID97_RS03635 ammonium transporter low > 91
Variovorax sp. SCN45 0.39 GFF965 Two-component transcriptional response regulator, LuxR family 0.46 GFF5119 Ammonium transporter — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF4893 Nitrogen regulation protein NR(I) 0.45 GFF1922 Ammonium transporter low > 90
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS13745 response regulator 0.46 ABZR86_RS09495 ammonium transporter — —
Shewanella sp. ANA-3 0.39 Shewana3_3697 two component LuxR family transcriptional regulator (RefSeq) 0.38 Shewana3_0778 ammonium transporter (RefSeq) low > 73
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_3749 Nitrogen regulation protein NR(I) 0.46 PfGW456L13_838 Ammonium transporter low > 87
Acidovorax sp. GW101-3H11 0.38 Ac3H11_4095 Nitrogen regulation protein NR(I) 0.46 Ac3H11_3401 Ammonium transporter low > 79
Pseudomonas putida KT2440 0.38 PP_3551 DNA-binding response regulator, LuxR family 0.43 PP_5233 ammonium transporter AmtB low > 96
Pseudomonas aeruginosa PA14 0.37 IKLFDK_21605 two-component system response regulator BfiR 0.44 IKLFDK_27015 ammonia channel protein low > 98
Pseudomonas segetis P6 0.37 MPMX49_02030 Response regulator protein TodT 0.46 MPMX49_04540 Ammonia channel low > 75
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS06700 LuxR family transcriptional regulator 0.47 HSERO_RS00425 ammonia channel protein low > 78
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_25435 nodulation protein NolW 0.50 AO356_12705 ammonia channel protein low > 104
Shewanella amazonensis SB2B 0.36 Sama_3183 response regulator receiver protein (RefSeq) 0.14 Sama_0651 Rh-like protein/ammonium transporter (RefSeq) low > 62
Serratia liquefaciens MT49 0.33 IAI46_06840 response regulator transcription factor 0.43 IAI46_05085 ammonium transporter AmtB low > 87

Not shown: 0 genomes with orthologs for GFF3048 only; 86 genomes with orthologs for GFF785 only