Conservation of cofitness between HP15_604 and HP15_603 in Marinobacter adhaerens HP15

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_604 conserved hypothetical protein CHP00246 1.0 HP15_603 Iojap-related protein 0.56 1
Dickeya dianthicola ME23 0.68 DZA65_RS06565 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.49 DZA65_RS06570 ribosome silencing factor low > 75
Dickeya dadantii 3937 0.68 DDA3937_RS06175 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.49 DDA3937_RS06180 ribosome silencing factor — —
Pectobacterium carotovorum WPP14 0.67 HER17_RS15240 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.49 HER17_RS15235 ribosome silencing factor low > 75
Dickeya dianthicola 67-19 0.67 HGI48_RS06220 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.49 HGI48_RS06225 ribosome silencing factor — —
Serratia liquefaciens MT49 0.67 IAI46_05935 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.50 IAI46_05940 ribosome silencing factor — —
Rahnella sp. WP5 0.67 EX31_RS23125 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.48 EX31_RS23130 ribosome silencing factor low > 89
Klebsiella michiganensis M5al 0.66 BWI76_RS08040 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.50 BWI76_RS08045 ribosome silencing factor RsfS — —
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_04865 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.45 CSW01_04870 ribosome silencing factor low > 62
Enterobacter sp. TBS_079 0.66 MPMX20_01295 Ribosomal RNA large subunit methyltransferase H 0.50 MPMX20_01296 Ribosomal silencing factor RsfS low > 85
Pantoea sp. MT58 0.66 IAI47_14020 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.48 IAI47_14015 ribosome silencing factor 0.59 24
Erwinia tracheiphila SCR3 0.66 LU632_RS16370 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.46 LU632_RS16365 rsfS ribosome silencing factor low > 74
Escherichia coli BW25113 0.66 b0636 ybeA hypothetical protein (NCBI) 0.49 b0637 ybeB orf, hypothetical protein (VIMSS) — —
Escherichia coli Nissle 1917 0.66 ECOLIN_RS03465 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.49 ECOLIN_RS03470 ribosome silencing factor — —
Escherichia coli BL21 0.66 ECD_00605 23S rRNA m(3)Psi1915 pseudouridine methyltransferase, SAM-dependent 0.49 ECD_00606 ribosomal silencing factor — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_03070 Ribosomal RNA large subunit methyltransferase H 0.49 OHPLBJKB_03069 Ribosomal silencing factor RsfS — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF4549 LSU m3Psi1915 methyltransferase RlmH 0.48 GFF4550 Iojap protein low > 78
Escherichia fergusonii Becca 0.65 EFB2_03456 Ribosomal RNA large subunit methyltransferase H 0.49 EFB2_03455 Ribosomal silencing factor RsfS 0.46 4
Escherichia coli ECRC102 0.65 NIAGMN_05415 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.49 NIAGMN_05410 rsfS ribosome silencing factor — —
Escherichia coli ECRC99 0.65 KEDOAH_20610 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.49 KEDOAH_20615 rsfS ribosome silencing factor — —
Escherichia coli ECRC101 0.65 OKFHMN_07360 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.49 OKFHMN_07355 rsfS ribosome silencing factor — —
Escherichia coli ECRC62 0.65 BNILDI_21745 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.49 BNILDI_21740 rsfS ribosome silencing factor — —
Escherichia coli ECOR38 0.65 HEPCGN_00915 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.49 HEPCGN_00920 rsfS ribosome silencing factor — —
Escherichia coli ECRC98 0.65 JDDGAC_11005 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.49 JDDGAC_11000 rsfS ribosome silencing factor — —
Escherichia coli ECRC101 0.65 MCAODC_26575 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.49 MCAODC_26570 rsfS ribosome silencing factor — —
Escherichia coli ECOR27 0.65 NOLOHH_23735 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.49 NOLOHH_23730 rsfS ribosome silencing factor — —
Alteromonas macleodii MIT1002 0.64 MIT1002_01852 Ribosomal RNA large subunit methyltransferase H 0.48 MIT1002_01853 Ribosomal silencing factor RsfS — —
Pseudomonas sp. S08-1 0.63 OH686_09325 rRNA large subunit m3Psi methyltransferase RlmH 0.57 OH686_09330 ribosome silencing factor low > 80
Shewanella amazonensis SB2B 0.62 Sama_2587 rRNA large subunit methyltransferase (RefSeq) 0.49 Sama_2586 iojap domain-containing protein (RefSeq) 0.27 30
Pseudomonas syringae pv. syringae B728a 0.61 Psyr_4366 Protein of unknown function DUF163 0.52 Psyr_4367 Iojap-related protein — —
Shewanella loihica PV-4 0.61 Shew_2934 SPOUT methyltransferase superfamily protein (RefSeq) 0.52 Shew_2933 iojap-like protein (RefSeq) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.61 Psyr_4366 Protein of unknown function DUF163 0.52 Psyr_4367 Iojap-related protein low > 86
Shewanella sp. ANA-3 0.61 Shewana3_0996 rRNA large subunit methyltransferase (RefSeq) 0.49 Shewana3_0997 iojap-like protein (RefSeq) — —
Kangiella aquimarina DSM 16071 0.61 B158DRAFT_0085 rRNA large subunit m3Psi methyltransferase RlmH 0.59 B158DRAFT_0086 iojap-like ribosome-associated protein 0.96 1
Shewanella oneidensis MR-1 0.61 SO1169 conserved hypothetical protein TIGR00246 (NCBI ptt file) 0.51 SO1170 iojap domain protein (NCBI ptt file) low > 76
Pseudomonas stutzeri RCH2 0.60 Psest_0511 rRNA large subunit m3Psi methyltransferase RlmH 0.56 Psest_0510 iojap-like ribosome-associated protein low > 67
Castellaniella sp019104865 MT123 0.45 ABCV34_RS02530 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.45 ABCV34_RS02535 ribosome silencing factor low > 48
Dechlorosoma suillum PS 0.44 Dsui_0451 hypothetical protein 0.48 Dsui_0452 iojap-like ribosome-associated protein low > 51
Azospirillum brasilense Sp245 0.31 AZOBR_RS04060 50S rRNA methyltransferase 0.42 AZOBR_RS04065 ribosome-associated protein IOJAP 0.40 34
Parabacteroides merdae CL09T00C40 0.30 HMPREF1078_RS16715 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.32 HMPREF1078_RS16245 ribosome silencing factor low > 61
Magnetospirillum magneticum AMB-1 0.30 AMB_RS20655 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.40 AMB_RS23800 ribosome silencing factor low > 64
Pedobacter sp. GW460-11-11-14-LB5 0.28 CA265_RS16470 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.32 CA265_RS21000 ribosome silencing factor low > 88
Phocaeicola vulgatus CL09T03C04 0.28 HMPREF1058_RS15935 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.29 HMPREF1058_RS14110 ribosome silencing factor low > 67
Mucilaginibacter yixingensis YX-36 DSM 26809 0.27 ABZR88_RS17055 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.29 ABZR88_RS20165 ribosome silencing factor low > 71
Phocaeicola dorei CL03T12C01 0.27 ABI39_RS11895 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.27 ABI39_RS09760 ribosome silencing factor low > 72
Bacteroides stercoris CC31F 0.26 HMPREF1181_RS10755 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.27 HMPREF1181_RS09150 ribosome silencing factor low > 56
Bacteroides thetaiotaomicron VPI-5482 0.25 BT1562 conserved hypothetical protein (NCBI ptt file) 0.26 BT4008 conserved hypothetical protein (NCBI ptt file) low > 81
Rhodopseudomonas palustris CGA009 0.22 TX73_000870 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.45 TX73_000865 ribosome silencing factor low > 86

Not shown: 45 genomes with orthologs for HP15_604 only; 6 genomes with orthologs for HP15_603 only