Conservation of cofitness between PS417_27710 and PS417_28220 in Pseudomonas simiae WCS417

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_27710 AsnC family transcriptional regulator 1.0 PS417_28220 LysR family transcriptional regulator 0.28 6
Pseudomonas fluorescens SBW25 1.00 PFLU_RS29385 AsnC family transcriptional regulator 0.98 PFLU_RS29885 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS29385 AsnC family transcriptional regulator 0.98 PFLU_RS29885 LysR family transcriptional regulator low > 109
Pseudomonas sp. RS175 1.00 PFR28_04400 Leucine-responsive regulatory protein 0.87 PFR28_04519 HTH-type transcriptional activator CmpR low > 88
Pseudomonas fluorescens FW300-N1B4 1.00 Pf1N1B4_2143 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.88 Pf1N1B4_2009 LysR family transcriptional regulator PA5437 0.31 19
Pseudomonas fluorescens FW300-N2E3 1.00 AO353_09160 AsnC family transcriptional regulator 0.90 AO353_10035 LysR family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N2E2 0.99 Pf6N2E2_4390 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.85 Pf6N2E2_4277 LysR family transcriptional regulator PA5437 low > 103
Pseudomonas fluorescens FW300-N2C3 0.99 AO356_12615 AsnC family transcriptional regulator 0.88 AO356_12015 LysR family transcriptional regulator low > 104
Pseudomonas fluorescens GW456-L13 0.99 PfGW456L13_811 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.88 PfGW456L13_727 LysR family transcriptional regulator PA5437 0.26 69
Pseudomonas putida KT2440 0.97 PP_5271 DNA-binding transcriptional dual regulator, leucine-binding 0.83 PP_5348 Transcriptional regulator, LysR family low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_0234 transcriptional regulator, AsnC family 0.81 Psyr_5062 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_0234 transcriptional regulator, AsnC family 0.81 Psyr_5062 transcriptional regulator, LysR family low > 86
Pseudomonas sp. S08-1 0.93 OH686_13680 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.68 OH686_13195 Transcriptional regulator, LysR family low > 80
Pseudomonas stutzeri RCH2 0.91 Psest_3794 Transcriptional regulators 0.72 Psest_4086 Transcriptional regulator 0.25 21
Xanthomonas campestris pv. campestris strain 8004 0.80 Xcc-8004.4622.1 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.18 Xcc-8004.309.1 Chromosome initiation inhibitor low > 74
Rhodanobacter denitrificans FW104-10B01 0.75 LRK54_RS00595 winged helix-turn-helix transcriptional regulator 0.19 LRK54_RS10595 LysR family transcriptional regulator low > 59
Rhodanobacter denitrificans MT42 0.75 LRK55_RS00365 winged helix-turn-helix transcriptional regulator 0.18 LRK55_RS10235 LysR family transcriptional regulator low > 63
Burkholderia phytofirmans PsJN 0.70 BPHYT_RS14785 AsnC family transcriptional regulator 0.32 BPHYT_RS29890 LysR family transcriptional regulator low > 109
Paraburkholderia bryophila 376MFSha3.1 0.70 H281DRAFT_04288 transcriptional regulator, AsnC family 0.33 H281DRAFT_01292 transcriptional regulator, LysR family
Paraburkholderia graminis OAS925 0.70 ABIE53_003132 Lrp/AsnC family leucine-responsive transcriptional regulator 0.33 ABIE53_005522 DNA-binding transcriptional LysR family regulator low > 113
Paraburkholderia sabiae LMG 24235 0.69 QEN71_RS04195 Lrp/AsnC ligand binding domain-containing protein 0.34 QEN71_RS32870 LysR family transcriptional regulator low > 153
Cupriavidus basilensis FW507-4G11 0.67 RR42_RS04590 AsnC family transcriptional regulator 0.30 RR42_RS31340 transcriptional regulator low > 128
Variovorax sp. OAS795 0.61 ABID97_RS22380 winged helix-turn-helix transcriptional regulator 0.29 ABID97_RS24450 LysR family transcriptional regulator low > 91
Shewanella loihica PV-4 0.57 Shew_2025 leucine-responsive transcriptional regulator (RefSeq) 0.33 Shew_1245 LysR family transcriptional regulator (RefSeq) low > 60
Shewanella amazonensis SB2B 0.57 Sama_1771 leucine-responsive transcriptional regulator (RefSeq) 0.25 Sama_0693 RuBisCo operon transcriptional regulator (RefSeq) low > 62
Shewanella oneidensis MR-1 0.56 SO2305 lrp leucine-responsive regulatory protein (NCBI ptt file) 0.24 SO3757 rbcR rubisco operon transcriptional regulator (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.56 Shewana3_2049 leucine-responsive transcriptional regulator (RefSeq) 0.24 Shewana3_0835 LysR family transcriptional regulator (RefSeq) low > 73
Sinorhizobium meliloti 1021 0.51 SMc00681 leucine-responsive regulatory protein 0.25 SM_b20203 transcriptional regulator
Acidovorax sp. GW101-3H11 0.50 Ac3H11_2849 PutR, transcriptional activator of PutA and PutP 0.32 Ac3H11_3174 RuBisCO operon transcriptional regulator low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF2725 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.31 GFF2192 Cys regulon transcriptional activator CysB low > 90
Azospirillum sp. SherDot2 0.47 MPMX19_03947 Leucine-responsive regulatory protein 0.28 MPMX19_02949 HTH-type transcriptional activator CmpR low > 112
Phaeobacter inhibens DSM 17395 0.37 PGA1_c11760 putative proline dehydrogenase transcriptional activator 0.12 PGA1_c02580 putative HTH-type transcriptional regulator pcaQ low > 62

Not shown: 47 genomes with orthologs for PS417_27710 only; 8 genomes with orthologs for PS417_28220 only