Conservation of cofitness between GFF149 and GFF4889 in Hydrogenophaga sp. GW460-11-11-14-LB1

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF149 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 1.0 GFF4889 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) 0.44 13
Variovorax sp. OAS795 0.77 ABID97_RS07235 phosphoglycerate dehydrogenase 0.68 ABID97_RS14105 dihydrolipoyllysine-residue acetyltransferase low > 91
Acidovorax sp. GW101-3H11 0.76 Ac3H11_4790 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.70 Ac3H11_4092 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) low > 79
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_08510 3-phosphoglycerate dehydrogenase 0.40 AO353_12860 dihydrolipoamide acetyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.75 AO356_10300 3-phosphoglycerate dehydrogenase 0.40 AO356_08965 dihydrolipoamide acetyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.75 Pf6N2E2_3932 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.41 Pf6N2E2_3675 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) — —
Pseudomonas simiae WCS417 0.75 PS417_27040 3-phosphoglycerate dehydrogenase 0.40 PS417_02215 dihydrolipoamide acetyltransferase — —
Pseudomonas sp. RS175 0.75 PFR28_04842 D-3-phosphoglycerate dehydrogenase 0.42 PFR28_05060 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex — —
Pseudomonas fluorescens SBW25 0.75 PFLU_RS28695 phosphoglycerate dehydrogenase 0.41 PFLU_RS02270 dihydrolipoyllysine-residue acetyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS28695 phosphoglycerate dehydrogenase 0.41 PFLU_RS02270 dihydrolipoyllysine-residue acetyltransferase — —
Pseudomonas fluorescens FW300-N1B4 0.74 Pf1N1B4_2272 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.40 Pf1N1B4_1477 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) — —
Pseudomonas sp. S08-1 0.74 OH686_11280 D-3-phosphoglycerate dehydrogenase 0.45 OH686_09715 dihydrolipoyllysine-residue acetyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_4852 D-3-phosphoglycerate dehydrogenase 0.39 Psyr_0517 Dihydrolipoamide acetyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_4852 D-3-phosphoglycerate dehydrogenase 0.39 Psyr_0517 Dihydrolipoamide acetyltransferase low > 86
Pseudomonas fluorescens GW456-L13 0.74 PfGW456L13_943 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.40 PfGW456L13_215 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) — —
Variovorax sp. SCN45 0.74 GFF2538 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.68 GFF968 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) low > 127
Pseudomonas putida KT2440 0.73 PP_5155 D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase 0.40 PP_0338 AceF-S-acetyldihydrolipoate — —
Pseudomonas stutzeri RCH2 0.73 Psest_3873 Phosphoglycerate dehydrogenase and related dehydrogenases 0.46 Psest_0447 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form — —
Marinobacter adhaerens HP15 0.68 HP15_2554 D-3-phosphoglycerate dehydrogenase-like protein 0.41 HP15_3045 pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase — —
Shewanella sp. ANA-3 0.65 Shewana3_3416 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.45 Shewana3_0427 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.64 SO0862 serA D-3-phosphoglycerate dehydrogenase (NCBI ptt file) 0.45 SO0425 aceF pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.64 Sama_2949 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.45 Sama_0376 aceF dihydrolipoamide acetyltransferase (RefSeq) low > 62
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS09635 phosphoglycerate dehydrogenase 0.46 ABZR86_RS12285 dihydrolipoyllysine-residue acetyltransferase — —
Kangiella aquimarina DSM 16071 0.63 B158DRAFT_0518 Phosphoglycerate dehydrogenase and related dehydrogenases 0.46 B158DRAFT_2145 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form low > 40
Shewanella loihica PV-4 0.63 Shew_3196 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.46 Shew_3430 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase (RefSeq) low > 60
Acinetobacter radioresistens SK82 0.63 MPMX26_02773 D-3-phosphoglycerate dehydrogenase 0.38 MPMX26_02924 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex low > 36
Alteromonas macleodii MIT1002 0.62 MIT1002_02993 D-3-phosphoglycerate dehydrogenase 0.45 MIT1002_03002 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex low > 70
Dickeya dianthicola ME23 0.62 DZA65_RS19540 phosphoglycerate dehydrogenase 0.44 DZA65_RS18995 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase — —
Dickeya dianthicola 67-19 0.62 HGI48_RS18400 phosphoglycerate dehydrogenase 0.44 HGI48_RS17845 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.62 Xcc-8004.2931.1 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.52 Xcc-8004.4587.1 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) — —
Dickeya dadantii 3937 0.62 DDA3937_RS18480 phosphoglycerate dehydrogenase 0.45 DDA3937_RS17920 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase — —
Enterobacter sp. TBS_079 0.62 MPMX20_03771 D-3-phosphoglycerate dehydrogenase 0.44 MPMX20_00808 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex — —
Enterobacter asburiae PDN3 0.61 EX28DRAFT_2965 Phosphoglycerate dehydrogenase and related dehydrogenases 0.44 EX28DRAFT_3711 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form — —
Erwinia tracheiphila SCR3 0.61 LU632_RS05855 serA phosphoglycerate dehydrogenase 0.48 LU632_RS03085 aceF pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase — —
Pectobacterium carotovorum WPP14 0.61 HER17_RS02725 phosphoglycerate dehydrogenase 0.46 HER17_RS03295 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase — —
Klebsiella michiganensis M5al 0.61 BWI76_RS23920 D-3-phosphoglycerate dehydrogenase 0.45 BWI76_RS04885 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase — —
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_12555 phosphoglycerate dehydrogenase 0.47 CSW01_12215 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase — —
Serratia liquefaciens MT49 0.61 IAI46_20900 phosphoglycerate dehydrogenase 0.44 IAI46_21320 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase — —
Pantoea sp. MT58 0.60 IAI47_03725 phosphoglycerate dehydrogenase 0.45 IAI47_15805 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.60 GFF3013 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.45 GFF121 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) low > 78
Rahnella sp. WP5 0.60 EX31_RS21470 phosphoglycerate dehydrogenase 0.46 EX31_RS03475 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase — —
Escherichia coli ECRC98 0.60 JDDGAC_23100 serA phosphoglycerate dehydrogenase 0.46 JDDGAC_14090 aceF pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_00803 D-3-phosphoglycerate dehydrogenase 0.46 OHPLBJKB_03546 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex — —
Escherichia coli BL21 0.60 ECD_02744 D-3-phosphoglycerate dehydrogenase 0.46 ECD_00114 pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2 — —
Escherichia coli ECRC101 0.60 OKFHMN_19460 serA phosphoglycerate dehydrogenase 0.46 OKFHMN_10495 aceF pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase — —
Escherichia coli ECOR38 0.60 HEPCGN_18760 serA phosphoglycerate dehydrogenase 0.46 HEPCGN_08475 aceF pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase — —
Escherichia coli ECRC101 0.60 MCAODC_09980 serA phosphoglycerate dehydrogenase 0.46 MCAODC_01010 aceF pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase — —
Escherichia coli BW25113 0.60 b2913 serA D-3-phosphoglycerate dehydrogenase (NCBI) 0.46 b0115 aceF dihydrolipoamide acetyltransferase (NCBI) — —
Escherichia coli ECOR27 0.60 NOLOHH_11370 serA phosphoglycerate dehydrogenase 0.46 NOLOHH_02840 aceF pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase — —
Escherichia coli ECRC102 0.60 NIAGMN_17225 serA phosphoglycerate dehydrogenase 0.46 NIAGMN_08345 aceF pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase — —
Escherichia coli ECRC99 0.60 KEDOAH_08680 serA phosphoglycerate dehydrogenase 0.46 KEDOAH_17660 aceF pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase — —
Escherichia fergusonii Becca 0.59 EFB2_00990 D-3-phosphoglycerate dehydrogenase 0.47 EFB2_03930 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex — —
Escherichia coli ECRC62 0.59 BNILDI_09905 serA phosphoglycerate dehydrogenase 0.46 BNILDI_08770 aceF pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase — —
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS27010 D-3-phosphoglycerate dehydrogenase 0.55 RR42_RS07370 dihydrolipoamide acetyltransferase — —

Not shown: 12 genomes with orthologs for GFF149 only; 11 genomes with orthologs for GFF4889 only