Conservation of cofitness between Psest_3316 and Psest_3988 in Pseudomonas stutzeri RCH2

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3316 Predicted P-loop-containing kinase 1.0 Psest_3988 phosphoenolpyruvate carboxykinase (ATP) 0.27 7
Pseudomonas sp. S08-1 0.88 OH686_08560 RNase adapter protein RapZ 0.83 OH686_11060 phosphoenolpyruvate carboxykinase (ATP) low > 80
Pseudomonas fluorescens FW300-N2C3 0.87 AO356_07050 glmZ(sRNA)-inactivating NTPase 0.82 AO356_10140 phosphoenolpyruvate carboxykinase [ATP] low > 104
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_3270 Hypothetical ATP-binding protein UPF0042, contains P-loop 0.82 Pf6N2E2_3899 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 103
Pseudomonas fluorescens SBW25-INTG 0.87 PFLU_RS04385 RNase adapter RapZ 0.79 PFLU_RS01320 phosphoenolpyruvate carboxykinase low > 109
Pseudomonas fluorescens SBW25 0.87 PFLU_RS04385 RNase adapter RapZ 0.79 PFLU_RS01320 phosphoenolpyruvate carboxykinase 0.69 59
Pseudomonas sp. RS175 0.86 PFR28_00170 RNase adapter protein RapZ 0.81 PFR28_04874 Phosphoenolpyruvate carboxykinase (ATP) low > 88
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_5017 Hypothetical ATP-binding protein UPF0042, contains P-loop 0.81 PfGW456L13_420 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 87
Pseudomonas simiae WCS417 0.86 PS417_04330 glmZ(sRNA)-inactivating NTPase 0.79 PS417_01210 hypothetical protein — —
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_1083 Hypothetical ATP-binding protein UPF0042, contains P-loop 0.81 Pf1N1B4_1779 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) — —
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_05195 glmZ(sRNA)-inactivating NTPase 0.80 AO353_11775 phosphoenolpyruvate carboxykinase [ATP] low > 101
Pseudomonas syringae pv. syringae B728a 0.85 Psyr_4150 Uncharacterized P-loop ATPase protein UPF0042 0.81 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.85 Psyr_4150 Uncharacterized P-loop ATPase protein UPF0042 0.81 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Marinobacter adhaerens HP15 0.53 HP15_2445 protein yhbJ 0.74 HP15_3498 phosphoenolpyruvate carboxykinase (ATP) — —
Alteromonas macleodii MIT1002 0.47 MIT1002_00824 glmZ(sRNA)-inactivating NTPase 0.70 MIT1002_03972 Phosphoenolpyruvate carboxykinase [ATP] 0.46 67
Klebsiella michiganensis M5al 0.47 BWI76_RS25280 RNase adaptor protein RapZ 0.35 BWI76_RS26155 phosphoenolpyruvate carboxykinase (ATP) low > 92
Enterobacter sp. TBS_079 0.47 MPMX20_04111 RNase adapter protein RapZ 0.36 MPMX20_04290 Phosphoenolpyruvate carboxykinase (ATP) low > 85
Escherichia coli ECRC102 0.47 NIAGMN_15685 rapZ RNase adapter RapZ 0.36 NIAGMN_14815 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Enterobacter asburiae PDN3 0.47 EX28DRAFT_3259 Predicted P-loop-containing kinase 0.36 EX28DRAFT_4140 phosphoenolpyruvate carboxykinase (ATP) low > 76
Escherichia coli Nissle 1917 0.47 ECOLIN_RS18440 RNase adapter RapZ 0.36 ECOLIN_RS19435 phosphoenolpyruvate carboxykinase (ATP) low > 52
Escherichia coli ECRC99 0.47 KEDOAH_10225 rapZ RNase adapter RapZ 0.36 KEDOAH_11095 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli ECOR27 0.47 NOLOHH_09725 rapZ RNase adapter RapZ 0.36 NOLOHH_08835 pckA phosphoenolpyruvate carboxykinase (ATP) low > 57
Rahnella sp. WP5 0.47 EX31_RS12385 RNase adapter RapZ 0.35 EX31_RS04780 phosphoenolpyruvate carboxykinase (ATP) low > 89
Escherichia coli ECRC62 0.47 BNILDI_01810 rapZ RNase adapter RapZ 0.36 BNILDI_02685 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli BW25113 0.47 b3205 yhbJ hypothetical protein (NCBI) 0.36 b3403 pck phosphoenolpyruvate carboxykinase (NCBI) low > 76
Escherichia coli ECRC101 0.47 OKFHMN_17925 rapZ RNase adapter RapZ 0.36 OKFHMN_17045 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_00495 RNase adapter protein RapZ 0.36 OHPLBJKB_00300 Phosphoenolpyruvate carboxykinase (ATP) low > 73
Dickeya dadantii 3937 0.47 DDA3937_RS01515 RNase adapter RapZ 0.35 DDA3937_RS19610 phosphoenolpyruvate carboxykinase (ATP) low > 74
Pectobacterium carotovorum WPP14 0.47 HER17_RS20075 RNase adapter RapZ 0.35 HER17_RS01710 phosphoenolpyruvate carboxykinase (ATP) low > 75
Dickeya dianthicola 67-19 0.47 HGI48_RS01430 RNase adapter RapZ 0.36 HGI48_RS19740 phosphoenolpyruvate carboxykinase (ATP) low > 71
Serratia liquefaciens MT49 0.47 IAI46_22485 RNase adapter RapZ 0.36 IAI46_10700 phosphoenolpyruvate carboxykinase (ATP) low > 86
Dickeya dianthicola ME23 0.47 DZA65_RS01495 RNase adapter RapZ 0.36 DZA65_RS20830 phosphoenolpyruvate carboxykinase (ATP) low > 75
Escherichia coli ECRC101 0.47 MCAODC_08445 rapZ RNase adapter RapZ 0.36 MCAODC_07575 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli ECRC98 0.47 JDDGAC_21550 rapZ RNase adapter RapZ 0.36 JDDGAC_20675 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia fergusonii Becca 0.47 EFB2_00618 RNase adapter protein RapZ 0.36 EFB2_00425 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Escherichia coli BL21 0.47 ECD_03070 adaptor protein for GlmZ/GlmY sRNA decay, glucosamine-6-phosphate-regulated; NTPase 0.36 ECD_03255 phosphoenolpyruvate carboxykinase [ATP] low > 60
Escherichia coli ECOR38 0.47 HEPCGN_16800 rapZ RNase adapter RapZ 0.36 HEPCGN_15865 pckA phosphoenolpyruvate carboxykinase (ATP) low > 85
Erwinia tracheiphila SCR3 0.46 LU632_RS21295 rapZ RNase adapter RapZ 0.36 LU632_RS22930 pckA phosphoenolpyruvate carboxykinase (ATP) low > 74
Pantoea sp. MT58 0.46 IAI47_17200 RNase adapter RapZ 0.37 IAI47_01830 phosphoenolpyruvate carboxykinase (ATP) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF2949 Hypothetical ATP-binding protein UPF0042, contains P-loop 0.36 GFF615 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 78
Kangiella aquimarina DSM 16071 0.45 B158DRAFT_2077 Predicted P-loop-containing kinase 0.36 B158DRAFT_2395 phosphoenolpyruvate carboxykinase (ATP) low > 40
Vibrio cholerae E7946 ATCC 55056 0.44 CSW01_12830 RNase adaptor protein RapZ 0.36 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) low > 62
Shewanella oneidensis MR-1 0.44 SO3964 conserved hypothetical protein (NCBI ptt file) 0.71 SO0162 pckA phosphoenolpyruvate carboxykinase (ATP) (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.44 Shewana3_0669 hypothetical protein (RefSeq) 0.71 Shewana3_0147 phosphoenolpyruvate carboxykinase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.44 Sama_3091 hypothetical protein (RefSeq) 0.71 Sama_0165 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (from data) low > 62
Shewanella loihica PV-4 0.43 Shew_3314 hypothetical protein (RefSeq) 0.71 Shew_3623 phosphoenolpyruvate carboxykinase (RefSeq) — —
Fusobacterium nucleatum SB010 0.34 HUW76_06700 RNase adapter RapZ 0.45 HUW76_06485 phosphoenolpyruvate carboxykinase (ATP) low > 35
Phaeobacter inhibens DSM 17395 0.33 PGA1_c01180 Predicted P-loop-containing kinase 0.41 PGA1_c01140 phosphoenolpyruvate carboxykinase low > 62
Dinoroseobacter shibae DFL-12 0.30 Dshi_0209 hypothetical protein (RefSeq) 0.42 Dshi_0213 Phosphoenolpyruvate carboxykinase (ATP) (RefSeq) low > 64
Sphingomonas koreensis DSMZ 15582 0.27 Ga0059261_0917 Predicted P-loop-containing kinase 0.43 Ga0059261_0913 phosphoenolpyruvate carboxykinase (ATP) low > 68

Not shown: 33 genomes with orthologs for Psest_3316 only; 14 genomes with orthologs for Psest_3988 only