Conservation of cofitness between GFF5354 and GFF3812 in Variovorax sp. SCN45

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF5354 C4-dicarboxylate transport protein 1.0 GFF3812 Bis-ABC ATPase Uup 0.50 16
Variovorax sp. OAS795 0.90 ABID97_RS23115 dicarboxylate/amino acid:cation symporter 0.89 ABID97_RS00005 ATP-binding cassette domain-containing protein low > 91
Paraburkholderia sabiae LMG 24235 0.80 QEN71_RS11565 dicarboxylate/amino acid:cation symporter 0.60 QEN71_RS24715 ATP-binding cassette domain-containing protein low > 153
Pseudomonas fluorescens FW300-N1B4 0.78 Pf1N1B4_4962 C4-dicarboxylate transport protein 0.42 Pf1N1B4_3899 COG0488: ATPase components of ABC transporters with duplicated ATPase domains low > 87
Herbaspirillum seropedicae SmR1 0.73 HSERO_RS19090 C4-dicarboxylate ABC transporter 0.56 HSERO_RS06980 ABC transporter ATP-binding protein low > 78
Cupriavidus basilensis FW507-4G11 0.68 RR42_RS26040 C4-dicarboxylate ABC transporter 0.60 RR42_RS14685 ABC transporter ATP-binding protein low > 128
Sphingomonas koreensis DSMZ 15582 0.56 Ga0059261_0201 Na+/H+-dicarboxylate symporters 0.30 Ga0059261_1367 ATPase components of ABC transporters with duplicated ATPase domains low > 68
Azospirillum sp. SherDot2 0.56 MPMX19_03595 C4-dicarboxylate transport protein 2 0.34 MPMX19_01666 ABC transporter ATP-binding protein uup low > 112
Dechlorosoma suillum PS 0.55 Dsui_3482 Na+/H+ dicarboxylate symporter 0.51 Dsui_1883 ATPase component of ABC transporters with duplicated ATPase domain low > 51
Ralstonia solanacearum PSI07 0.54 RPSI07_RS14855 dicarboxylate/amino acid:cation symporter 0.59 RPSI07_RS19425 ABC transporter ATP-binding protein low > 81
Ralstonia solanacearum GMI1000 0.54 RS_RS09840 dicarboxylate/amino acid:cation symporter 0.58 RS_RS04825 ABC transporter ATP-binding protein low > 80
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS02470 dicarboxylate/amino acid:cation symporter 0.58 RALBFv3_RS14040 ABC transporter ATP-binding protein low > 76
Ralstonia solanacearum UW163 0.54 UW163_RS11255 dicarboxylate/amino acid:cation symporter 0.58 UW163_RS15770 ABC transporter ATP-binding protein — —
Pectobacterium carotovorum WPP14 0.53 HER17_RS14220 dicarboxylate/amino acid:cation symporter 0.39 HER17_RS11985 ABC transporter ATP-binding protein low > 75
Klebsiella michiganensis M5al 0.52 BWI76_RS08460 dicarboxylate/amino acid:cation symporter 0.41 BWI76_RS09930 ABC transporter ATPase low > 92
Dickeya dadantii 3937 0.50 DDA3937_RS07395 dicarboxylate/amino acid:cation symporter 0.40 DDA3937_RS12835 ABC transporter ATP-binding protein low > 74
Dickeya dianthicola 67-19 0.50 HGI48_RS07260 dicarboxylate/amino acid:cation symporter 0.41 HGI48_RS12905 ABC transporter ATP-binding protein low > 71
Escherichia coli ECRC98 0.50 JDDGAC_10545 gltP dicarboxylate/amino acid:cation symporter 0.41 JDDGAC_08885 uup ABC transporter ATP-binding protein low > 86
Escherichia coli ECRC102 0.50 NIAGMN_04940 gltP dicarboxylate/amino acid:cation symporter 0.41 NIAGMN_02995 uup ABC transporter ATP-binding protein — —
Escherichia coli ECRC99 0.50 KEDOAH_21075 gltP dicarboxylate/amino acid:cation symporter 0.41 KEDOAH_22460 uup ABC transporter ATP-binding protein — —
Dickeya dianthicola ME23 0.50 DZA65_RS07770 dicarboxylate/amino acid:cation symporter 0.41 DZA65_RS13370 ABC transporter ATP-binding protein low > 75
Escherichia coli ECRC101 0.50 MCAODC_26110 gltP dicarboxylate/amino acid:cation symporter 0.41 MCAODC_24665 uup ABC transporter ATP-binding protein low > 87
Escherichia coli ECRC100 0.50 OKFHMN_06890 gltP dicarboxylate/amino acid:cation symporter 0.41 OKFHMN_05275 uup ABC transporter ATP-binding protein low > 80
Escherichia coli ECOR38 0.50 HEPCGN_01380 gltP dicarboxylate/amino acid:cation symporter 0.42 HEPCGN_23245 uup ABC transporter ATP-binding protein low > 87
Enterobacter sp. TBS_079 0.49 MPMX20_02796 C4-dicarboxylate transport protein 0.40 MPMX20_01600 ABC transporter ATP-binding protein uup low > 85
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS14385 dicarboxylate/amino acid:cation symporter 0.58 ABZR87_RS09735 ATP-binding cassette domain-containing protein low > 80
Enterobacter asburiae PDN3 0.48 EX28DRAFT_0664 Na+/H+-dicarboxylate symporters 0.41 EX28DRAFT_1994 ATPase components of ABC transporters with duplicated ATPase domains low > 76
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_2249 Proton/glutamate symport protein @ Sodium/glutamate symport protein 0.39 Pf6N2E2_2293 COG0488: ATPase components of ABC transporters with duplicated ATPase domains low > 103
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_01905 L-aspartate transporter (from data) 0.40 AO356_02345 ABC transporter ATP-binding protein low > 104
Pseudomonas simiae WCS417 0.46 PS417_19045 amino acid:proton symporter 0.40 PS417_07555 ABC transporter ATPase low > 88
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS33330 C4-dicarboxylate ABC transporter 0.58 BPHYT_RS05925 ABC transporter ATP-binding protein low > 109
Shewanella sp. ANA-3 0.26 Shewana3_1726 sodium:dicarboxylate symporter (RefSeq) 0.42 Shewana3_1603 ABC transporter ATPase component (RefSeq) low > 73
Shewanella oneidensis MR-1 0.26 SO1948 sodium:dicarboxylate symporter family protein (NCBI ptt file) 0.42 SO1853 ABC transporter, ATP-binding protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.25 Shew_2227 sodium:dicarboxylate symporter (RefSeq) 0.40 Shew_1814 ABC transporter ATPase component (RefSeq) low > 60
Echinicola vietnamensis KMM 6221, DSM 17526 0.23 Echvi_1519 Na+/H+-dicarboxylate symporters 0.30 Echvi_1796 ATPase components of ABC transporters with duplicated ATPase domains low > 79
Pseudomonas stutzeri RCH2 0.22 Psest_1386 Na+/H+-dicarboxylate symporters 0.40 Psest_1845 ATPase components of ABC transporters with duplicated ATPase domains low > 67
Lysobacter sp. OAE881 0.22 ABIE51_RS17125 dicarboxylate/amino acid:cation symporter 0.42 ABIE51_RS12240 ribosomal protection-like ABC-F family protein low > 62
Kangiella aquimarina DSM 16071 0.21 B158DRAFT_2215 Na+/H+-dicarboxylate symporters 0.42 B158DRAFT_1925 ATPase components of ABC transporters with duplicated ATPase domains low > 40
Alteromonas macleodii MIT1002 0.21 MIT1002_01702 Glutamate-aspartate carrier protein 0.43 MIT1002_02038 ABC transporter ATP-binding protein uup low > 70
Marinobacter adhaerens HP15 0.20 HP15_2676 proton/sodium-glutamate symport protein 0.36 HP15_1508 ABC transporter ATPase component low > 73
Rhodanobacter sp. FW510-T8 0.17 OKGIIK_06560 gltP dicarboxylate/amino acid:cation symporter 0.42 OKGIIK_11805 ccmA heme ABC exporter ATP-binding protein CcmA low > 52
Rhodanobacter denitrificans FW104-10B01 0.16 LRK54_RS00700 dicarboxylate/amino acid:cation symporter 0.42 LRK54_RS12125 ATP-binding cassette domain-containing protein low > 59
Rhodanobacter denitrificans MT42 0.16 LRK55_RS00475 dicarboxylate/amino acid:cation symporter 0.42 LRK55_RS11860 ATP-binding cassette domain-containing protein low > 63

Not shown: 5 genomes with orthologs for GFF5354 only; 51 genomes with orthologs for GFF3812 only