Conservation of cofitness between Psest_3717 and Psest_3715 in Pseudomonas stutzeri RCH2

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3717 Tfp pilus assembly protein PilO 1.0 Psest_3715 type IV pilus secretin (or competence protein) PilQ 0.87 2
Pseudomonas sp. S08-1 0.76 OH686_10040 Type IV pilus biogenesis protein PilO 0.73 OH686_10025 Type IV pilus biogenesis protein PilQ low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_0405 Pilus assembly protein, PilO 0.74 Psyr_0407 type II and III secretion system protein:NolW-like protein:NolW-like protein low > 86
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_0405 Pilus assembly protein, PilO 0.74 Psyr_0407 type II and III secretion system protein:NolW-like protein:NolW-like protein low > 86
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_12485 pilus assembly protein PilP 0.73 AO353_12495 fimbrial protein 0.26 35
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_09405 pilus assembly protein PilP 0.71 AO356_09395 fimbrial protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_3758 Type IV pilus biogenesis protein PilO 0.71 Pf6N2E2_3756 Type IV pilus biogenesis protein PilQ low > 103
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_1541 Type IV pilus biogenesis protein PilO 0.73 Pf1N1B4_1539 Type IV pilus biogenesis protein PilQ low > 87
Pseudomonas sp. RS175 0.64 PFR28_05009 hypothetical protein 0.70 PFR28_05011 Type 3 secretion system secretin low > 88
Pseudomonas fluorescens GW456-L13 0.60 PfGW456L13_279 Type IV pilus biogenesis protein PilO 0.70 PfGW456L13_277 Type IV pilus biogenesis protein PilQ low > 87
Marinobacter adhaerens HP15 0.55 HP15_476 type 4 fimbrial biogenesis protein PilO 0.47 HP15_478 type 4 fimbrial biogenesis protein PilQ — —
Kangiella aquimarina DSM 16071 0.42 B158DRAFT_0760 Tfp pilus assembly protein PilO 0.38 B158DRAFT_0762 type IV pilus secretin (or competence protein) PilQ low > 40
Shewanella loihica PV-4 0.40 Shew_0210 pilus assembly protein, PilO (RefSeq) 0.33 Shew_0212 type IV pilus secretin PilQ (RefSeq) 0.42 1
Shewanella sp. ANA-3 0.39 Shewana3_3897 pilus assembly protein, PilO (RefSeq) 0.33 Shewana3_3895 type IV pilus secretin PilQ (RefSeq) low > 73
Shewanella oneidensis MR-1 0.38 SO0283 type IV pilus biogenesis protein PilO (NCBI ptt file) 0.33 SO0285 type IV pilus biogenesis protein PilQ (NCBI ptt file) 0.30 6
Shewanella amazonensis SB2B 0.38 Sama_3371 type IV pilus biogenesis protein PilO (RefSeq) 0.32 Sama_3369 type IV pilus biogenesis protein PilQ (RefSeq) 0.37 5
Rhodanobacter denitrificans MT42 0.37 LRK55_RS11570 type 4a pilus biogenesis protein PilO 0.32 LRK55_RS11580 type IV pilus secretin PilQ 0.93 2
Dechlorosoma suillum PS 0.36 Dsui_1189 Tfp pilus assembly protein PilO 0.34 Dsui_1191 type IV pilus secretin PilQ/competence protein 0.71 9
Dyella japonica UNC79MFTsu3.2 0.36 ABZR86_RS11800 type 4a pilus biogenesis protein PilO 0.32 ABZR86_RS11790 type IV pilus secretin PilQ 0.85 4
Xanthomonas campestris pv. campestris strain 8004 0.34 Xcc-8004.1192.1 Type IV pilus biogenesis protein PilO 0.27 Xcc-8004.1189.1 Type IV pilus biogenesis protein PilQ low > 74
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_12050 pilO fimbrial protein 0.32 OKGIIK_12040 pilQ type IV pilus secretin PilQ low > 52
Variovorax sp. OAS795 0.32 ABID97_RS23275 type 4a pilus biogenesis protein PilO 0.33 ABID97_RS23265 type IV pilus secretin PilQ 0.99 1
Variovorax sp. SCN45 0.31 GFF5321 Type IV pilus biogenesis protein PilO 0.32 GFF5323 Type IV pilus biogenesis protein PilQ 0.99 7
Lysobacter sp. OAE881 0.30 ABIE51_RS17175 type 4a pilus biogenesis protein PilO 0.26 ABIE51_RS17165 type IV pilus secretin PilQ family protein low > 62
Acidovorax sp. GW101-3H11 0.30 Ac3H11_4702 Type IV pilus biogenesis protein PilO 0.34 Ac3H11_4703 Type IV pilus biogenesis protein PilQ 0.68 1
Hydrogenophaga sp. GW460-11-11-14-LB1 0.27 GFF1335 Type IV pilus biogenesis protein PilO 0.35 GFF1333 Type IV pilus biogenesis protein PilQ 0.95 1
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS19025 pilus assembly protein PilO 0.33 RR42_RS19015 secretin low > 128
Ralstonia solanacearum PSI07 0.27 RPSI07_RS10280 pilus assembly protein PilO 0.33 RPSI07_RS10290 type IV pilus secretin PilQ 0.88 1
Ralstonia solanacearum UW163 0.26 UW163_RS06660 pilus assembly protein PilO 0.34 UW163_RS06670 type IV pilus secretin PilQ — —
Ralstonia solanacearum IBSBF1503 0.26 RALBFv3_RS06955 pilus assembly protein PilO 0.34 RALBFv3_RS06945 type IV pilus secretin PilQ 0.79 3
Ralstonia solanacearum GMI1000 0.25 RS_RS14900 type IV pilus biogenesis protein PilO 0.33 RS_RS14890 type IV pilus secretin PilQ low > 80
Ralstonia sp. UNC404CL21Col 0.25 ABZR87_RS02610 type 4a pilus biogenesis protein PilO 0.33 ABZR87_RS02600 temperature dependent type IV pilus secretin PilQ 0.98 1

Not shown: 2 genomes with orthologs for Psest_3717 only; 3 genomes with orthologs for Psest_3715 only