Conservation of cofitness between HP15_784 and HP15_3376 in Marinobacter adhaerens HP15

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_784 ribonuclease 3 1.0 HP15_3376 RNA polymerase-associated protein RapA 0.54 9
Pseudomonas putida KT2440 0.60 PP_1433 Ribonuclease 3 0.42 PP_1145 RNA polymerase-associated protein RapA — —
Pseudomonas stutzeri RCH2 0.59 Psest_3092 ribonuclease III, bacterial 0.43 Psest_1327 Superfamily II DNA/RNA helicases, SNF2 family low > 67
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_17495 ribonuclease III 0.42 AO356_04975 RNA polymerase-associated protein RapA — —
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_12455 ribonuclease 3 0.42 CSW01_12705 RNA polymerase-associated protein RapA — —
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_5426 Ribonuclease III (EC 3.1.26.3) 0.42 Pf6N2E2_2845 RNA polymerase associated protein RapA (EC 3.6.1.-) — —
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_3951 RNAse III 0.42 Psyr_3842 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_3951 RNAse III 0.42 Psyr_3842 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit — —
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_04510 ribonuclease III 0.42 AO353_17155 RNA polymerase-associated protein RapA — —
Pseudomonas simiae WCS417 0.56 PS417_05190 ribonuclease III 0.41 PS417_06645 RNA polymerase-associated protein RapA — —
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS05260 ribonuclease III 0.42 PFLU_RS06675 RNA polymerase-associated protein RapA — —
Pseudomonas fluorescens SBW25 0.56 PFLU_RS05260 ribonuclease III 0.42 PFLU_RS06675 RNA polymerase-associated protein RapA — —
Pseudomonas sp. S08-1 0.54 OH686_20080 ribonuclease III 0.43 OH686_19955 RNA polymerase associated protein RapA — —
Pseudomonas sp. RS175 0.54 PFR28_03523 Ribonuclease 3 0.42 PFR28_00612 RNA polymerase-associated protein RapA — —
Shewanella amazonensis SB2B 0.53 Sama_0880 rnc ribonuclease III (RefSeq) 0.40 Sama_3131 ATP-dependent helicase HepA (RefSeq) — —
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_892 Ribonuclease III (EC 3.1.26.3) 0.42 Pf1N1B4_3224 RNA polymerase associated protein RapA (EC 3.6.1.-) — —
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_4840 Ribonuclease III (EC 3.1.26.3) 0.42 PfGW456L13_4599 RNA polymerase associated protein RapA (EC 3.6.1.-) — —
Shewanella sp. ANA-3 0.52 Shewana3_3026 rnc ribonuclease III (RefSeq) 0.40 Shewana3_0574 ATP-dependent helicase HepA (RefSeq) — —
Shewanella oneidensis MR-1 0.52 SO1348 rnc ribonuclease III (NCBI ptt file) 0.40 SO0575 hepA RNA polymerase-associated protein HepA (NCBI ptt file) — —
Pectobacterium carotovorum WPP14 0.52 HER17_RS05815 ribonuclease III 0.42 HER17_RS02990 RNA polymerase-associated protein RapA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_01140 Ribonuclease 3 0.40 OHPLBJKB_03599 RNA polymerase-associated protein RapA — —
Escherichia coli ECRC102 0.52 NIAGMN_19180 rnc ribonuclease III 0.40 NIAGMN_08650 rapA RNA polymerase-associated protein RapA — —
Escherichia coli ECOR38 0.52 HEPCGN_20555 rnc ribonuclease III 0.40 HEPCGN_08790 rapA RNA polymerase-associated protein RapA — —
Escherichia coli ECOR27 0.52 NOLOHH_13085 rnc ribonuclease III 0.40 NOLOHH_03145 rapA RNA polymerase-associated protein RapA — —
Escherichia coli ECRC62 0.52 BNILDI_11885 rnc ribonuclease III 0.40 BNILDI_08460 rapA RNA polymerase-associated protein RapA — —
Escherichia fergusonii Becca 0.52 EFB2_01329 Ribonuclease 3 0.40 EFB2_03986 RNA polymerase-associated protein RapA — —
Escherichia coli BW25113 0.52 b2567 rnc ribonuclease III (NCBI) 0.40 b0059 hepA ATP-dependent helicase HepA (NCBI) low > 76
Escherichia coli ECRC99 0.52 KEDOAH_06810 rnc ribonuclease III 0.40 KEDOAH_17355 rapA RNA polymerase-associated protein RapA — —
Enterobacter asburiae PDN3 0.52 EX28DRAFT_0079 ribonuclease III, bacterial 0.41 EX28DRAFT_3651 Superfamily II DNA/RNA helicases, SNF2 family — —
Escherichia coli BL21 0.52 ECD_02461 RNase III 0.40 ECD_00061 RNA polymerase remodeling/recycling factor ATPase; RNA polymerase-associated, ATP-dependent RNA translocase — —
Shewanella loihica PV-4 0.52 Shew_1054 ribonuclease III (RefSeq) 0.40 Shew_0457 ATP-dependent helicase HepA (RefSeq) — —
Escherichia coli ECRC101 0.52 MCAODC_11940 rnc ribonuclease III 0.40 MCAODC_01315 rapA RNA polymerase-associated protein RapA — —
Escherichia coli ECRC98 0.52 JDDGAC_25075 rnc ribonuclease III 0.40 JDDGAC_14395 rapA RNA polymerase-associated protein RapA — —
Escherichia coli ECRC101 0.52 OKFHMN_21410 rnc ribonuclease III 0.40 OKFHMN_10800 rapA RNA polymerase-associated protein RapA — —
Escherichia coli Nissle 1917 0.52 ECOLIN_RS14530 ribonuclease III 0.40 ECOLIN_RS00315 RNA polymerase-associated protein RapA — —
Erwinia tracheiphila SCR3 0.51 LU632_RS15385 rnc ribonuclease III 0.41 LU632_RS02805 rapA RNA polymerase-associated protein RapA low > 74
Enterobacter sp. TBS_079 0.51 MPMX20_03438 Ribonuclease 3 0.41 MPMX20_00753 RNA polymerase-associated protein RapA — —
Klebsiella michiganensis M5al 0.51 BWI76_RS21320 ribonuclease 3 0.41 BWI76_RS04570 RNA polymerase-associated protein RapA — —
Dickeya dianthicola ME23 0.51 DZA65_RS16900 ribonuclease III 0.40 DZA65_RS19310 RNA polymerase-associated protein RapA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF2475 Ribonuclease III (EC 3.1.26.3) 0.40 GFF183 RNA polymerase associated protein RapA (EC 3.6.1.-) low > 78
Dickeya dadantii 3937 0.51 DDA3937_RS15735 ribonuclease III 0.40 DDA3937_RS18235 RNA polymerase-associated protein RapA — —
Dickeya dianthicola 67-19 0.51 HGI48_RS15820 ribonuclease III 0.40 HGI48_RS18170 RNA polymerase-associated protein RapA — —
Pantoea sp. MT58 0.50 IAI47_04880 ribonuclease III 0.41 IAI47_16055 RNA polymerase-associated protein RapA — —
Serratia liquefaciens MT49 0.50 IAI46_19550 ribonuclease III 0.41 IAI46_03275 RNA polymerase-associated protein RapA — —
Rahnella sp. WP5 0.49 EX31_RS21835 ribonuclease III 0.40 EX31_RS03745 RNA polymerase-associated protein RapA — —
Alteromonas macleodii MIT1002 0.47 MIT1002_02713 Ribonuclease 3 0.39 MIT1002_00659 RNA polymerase-associated protein RapA — —
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS07150 ribonuclease III 0.29 ABZR86_RS09245 RNA polymerase-associated protein RapA — —
Acinetobacter radioresistens SK82 0.45 MPMX26_02156 Ribonuclease 3 0.37 MPMX26_01027 RNA polymerase-associated protein RapA — —
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_07870 rnc ribonuclease III 0.29 OKGIIK_09865 rapA RNA polymerase-associated protein RapA low > 52
Rhodanobacter denitrificans MT42 0.43 LRK55_RS16685 ribonuclease III 0.29 LRK55_RS02635 RNA polymerase-associated protein RapA low > 63
Rhodanobacter denitrificans FW104-10B01 0.43 LRK54_RS16970 ribonuclease III 0.29 LRK54_RS02885 RNA polymerase-associated protein RapA 0.30 2

Not shown: 42 genomes with orthologs for HP15_784 only; 0 genomes with orthologs for HP15_3376 only