Conservation of cofitness between Psest_3200 and Psest_3318 in Pseudomonas stutzeri RCH2

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3200 Uncharacterized protein conserved in bacteria 1.0 Psest_3318 Predicted Zn-dependent proteases and their inactivated homologs 0.26 6
Pseudomonas putida KT2440 0.69 PP_0922 conserved protein of unknown function 0.81 PP_0942 regulatory protease low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_4050 Protein of unknown function DUF479 0.81 Psyr_4154 microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 low > 86
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_4050 Protein of unknown function DUF479 0.81 Psyr_4154 microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 low > 86
Pseudomonas fluorescens SBW25 0.67 PFLU_RS06860 DUF479 domain-containing protein 0.81 PFLU_RS04350 metalloprotease PmbA low > 109
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS06860 DUF479 domain-containing protein 0.81 PFLU_RS04350 metalloprotease PmbA low > 109
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_04845 ACP phosphodiesterase 0.81 AO356_07085 peptidase PmbA low > 104
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_2817 Acyl carrier protein phosphodiesterase (EC 3.1.4.14) 0.82 Pf6N2E2_3278 TldE protein, part of TldE/TldD proteolytic complex low > 103
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_3253 Acyl carrier protein phosphodiesterase (EC 3.1.4.14) 0.80 Pf1N1B4_1090 TldE protein, part of TldE/TldD proteolytic complex low > 87
Pseudomonas sp. RS175 0.67 PFR28_00638 Acyl carrier protein phosphodiesterase 0.82 PFR28_00163 Metalloprotease PmbA low > 88
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_17335 ACP phosphodiesterase 0.81 AO353_05205 peptidase PmbA low > 101
Pseudomonas simiae WCS417 0.66 PS417_06800 ACP phosphodiesterase 0.80 PS417_04295 peptidase PmbA low > 88
Pseudomonas fluorescens GW456-L13 0.65 PfGW456L13_4575 Acyl carrier protein phosphodiesterase (EC 3.1.4.14) 0.80 PfGW456L13_5024 TldE protein, part of TldE/TldD proteolytic complex low > 87
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_18025 ACP phosphodiesterase 0.49 CSW01_12845 metalloprotease PmbA low > 62
Shewanella amazonensis SB2B 0.37 Sama_2195 hypothetical protein (RefSeq) 0.52 Sama_0482 PmbA protein (RefSeq) low > 62
Shewanella loihica PV-4 0.37 Shew_2339 hypothetical protein (RefSeq) 0.50 Shew_0416 peptidase U62, modulator of DNA gyrase (RefSeq) low > 60
Dechlorosoma suillum PS 0.36 Dsui_2775 hypothetical protein 0.49 Dsui_1234 putative Zn-dependent protease-like protein low > 51
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_16090 Acyl carrier protein phosphodiesterase 0.50 OKGIIK_10260 pmbA metalloprotease PmbA low > 52
Dyella japonica UNC79MFTsu3.2 0.33 ABZR86_RS16295 ACP phosphodiesterase 0.47 ABZR86_RS21700 metalloprotease PmbA low > 74
Rhodanobacter denitrificans FW104-10B01 0.33 LRK54_RS09830 ACP phosphodiesterase 0.50 LRK54_RS03375 metalloprotease PmbA low > 59
Rhodanobacter denitrificans MT42 0.32 LRK55_RS09490 ACP phosphodiesterase 0.50 LRK55_RS03125 metalloprotease PmbA low > 63
Alteromonas macleodii MIT1002 0.31 MIT1002_02519 Acyl carrier protein phosphodiesterase 0.49 MIT1002_00230 peptidase PmbA low > 70
Serratia liquefaciens MT49 0.31 IAI46_04830 DUF479 domain-containing protein 0.49 IAI46_22575 metalloprotease PmbA low > 86
Pectobacterium carotovorum WPP14 0.31 HER17_RS16000 ACP phosphodiesterase 0.50 HER17_RS20090 metalloprotease PmbA low > 75
Klebsiella michiganensis M5al 0.30 BWI76_RS06290 ACP phosphodiesterase 0.49 BWI76_RS02850 metalloprotease PmbA low > 92
Dickeya dadantii 3937 0.28 DDA3937_RS05460 DUF479 domain-containing protein 0.47 DDA3937_RS01500 metalloprotease PmbA low > 74
Rahnella sp. WP5 0.28 EX31_RS22085 DUF479 domain-containing protein 0.50 EX31_RS12320 metalloprotease PmbA low > 89
Pantoea sp. MT58 0.28 IAI47_14815 DUF479 domain-containing protein 0.48 IAI47_02765 metalloprotease PmbA low > 76
Escherichia coli Nissle 1917 0.28 ECOLIN_RS02435 ACP phosphodiesterase 0.49 ECOLIN_RS24570 metalloprotease PmbA low > 52
Dickeya dianthicola ME23 0.27 DZA65_RS05845 DUF479 domain-containing protein 0.47 DZA65_RS01480 metalloprotease PmbA low > 75
Escherichia fergusonii Becca 0.27 EFB2_03653 Acyl carrier protein phosphodiesterase 0.49 EFB2_04298 Metalloprotease PmbA low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.27 OHPLBJKB_03272 Acyl carrier protein phosphodiesterase 0.48 OHPLBJKB_03800 Metalloprotease PmbA low > 73
Escherichia coli ECRC62 0.27 BNILDI_22865 acpH ACP phosphodiesterase 0.48 BNILDI_07325 pmbA metalloprotease PmbA — —
Escherichia coli BW25113 0.27 b0404 yajB hypothetical protein (NCBI) 0.48 b4235 pmbA predicted peptidase required for the maturation and secretion of the antibiotic peptide MccB17 (NCBI) low > 76
Escherichia coli BL21 0.27 ECD_00352 acyl carrier protein (ACP) phosphodiesterase; ACP hydrolyase 0.48 ECD_04103 putative antibiotic peptide MccB17 maturation peptidase low > 60
Escherichia coli ECOR38 0.27 HEPCGN_07155 acpH ACP phosphodiesterase 0.48 HEPCGN_10125 pmbA metalloprotease PmbA low > 85
Escherichia coli ECOR27 0.27 NOLOHH_01450 acpH ACP phosphodiesterase 0.48 NOLOHH_04185 pmbA metalloprotease PmbA low > 57
Enterobacter sp. TBS_079 0.27 MPMX20_00995 Acyl carrier protein phosphodiesterase 0.49 MPMX20_00517 Metalloprotease PmbA low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.27 GFF4303 Acyl carrier protein phosphodiesterase (EC 3.1.4.14) 0.48 GFF904 TldE protein, part of TldE/TldD proteolytic complex low > 78
Dickeya dianthicola 67-19 0.27 HGI48_RS05520 DUF479 domain-containing protein 0.47 HGI48_RS01415 metalloprotease PmbA low > 71
Escherichia coli ECRC101 0.27 MCAODC_27740 acpH ACP phosphodiesterase 0.48 MCAODC_02430 pmbA metalloprotease PmbA — —
Escherichia coli ECRC98 0.27 JDDGAC_12170 acpH ACP phosphodiesterase 0.48 JDDGAC_15565 pmbA metalloprotease PmbA — —
Enterobacter asburiae PDN3 0.27 EX28DRAFT_2567 Uncharacterized protein conserved in bacteria 0.49 EX28DRAFT_3422 Predicted Zn-dependent proteases and their inactivated homologs low > 76
Escherichia coli ECRC102 0.27 NIAGMN_06570 acpH ACP phosphodiesterase 0.48 NIAGMN_09775 pmbA metalloprotease PmbA — —
Escherichia coli ECRC101 0.27 OKFHMN_08515 acpH ACP phosphodiesterase 0.48 OKFHMN_11925 pmbA metalloprotease PmbA — —
Escherichia coli ECRC99 0.27 KEDOAH_19450 acpH ACP phosphodiesterase 0.48 KEDOAH_16230 pmbA metalloprotease PmbA — —
Erwinia tracheiphila SCR3 0.25 LU632_RS18480 ACP phosphodiesterase 0.47 LU632_RS02145 pmbA metalloprotease PmbA low > 74
Shewanella sp. ANA-3 0.21 Shewana3_1432 hypothetical protein (RefSeq) 0.51 Shewana3_3631 microcin-processing peptidase 1 (RefSeq) low > 73
Shewanella oneidensis MR-1 0.21 SO3116 conserved hypothetical protein (NCBI ptt file) 0.51 SO4078 pmbA pmba protein (NCBI ptt file) low > 76

Not shown: 3 genomes with orthologs for Psest_3200 only; 38 genomes with orthologs for Psest_3318 only