Conservation of cofitness between PS417_04175 and PS417_16525 in Pseudomonas simiae WCS417

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_04175 peptidase 1.0 PS417_16525 isocitrate dehydrogenase 0.23 3
Pseudomonas fluorescens SBW25-INTG 0.89 PFLU_RS04215 ClpXP protease specificity-enhancing factor 0.99 PFLU_RS18565 NADP-dependent isocitrate dehydrogenase low > 109
Pseudomonas fluorescens SBW25 0.89 PFLU_RS04215 ClpXP protease specificity-enhancing factor 0.99 PFLU_RS18565 NADP-dependent isocitrate dehydrogenase low > 109
Pseudomonas sp. S08-1 0.78 OH686_08370 Stringent starvation protein B 0.93 OH686_00220 isocitrate dehydrogenase, NADP-dependent — —
Pseudomonas fluorescens FW300-N2E2 0.76 Pf6N2E2_5341 Stringent starvation protein B 0.98 Pf6N2E2_289 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) low > 103
Pseudomonas fluorescens FW300-N2C3 0.76 AO356_17085 peptidase 0.98 AO356_22135 isocitrate dehydrogenase low > 104
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_958 Stringent starvation protein B 0.98 Pf1N1B4_4052 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) low > 87
Pseudomonas sp. RS175 0.75 PFR28_03602 Stringent starvation protein B 0.98 PFR28_02616 Isocitrate dehydrogenase [NADP] low > 88
Pseudomonas fluorescens GW456-L13 0.75 PfGW456L13_1638 Stringent starvation protein B 0.98 PfGW456L13_2643 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) low > 87
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_15265 peptidase 0.98 AO353_27690 isocitrate dehydrogenase low > 101
Pseudomonas stutzeri RCH2 0.74 Psest_3275 Stringent starvation protein B 0.90 Psest_2024 isocitrate dehydrogenase, NADP-dependent, prokaryotic type low > 67
Pseudomonas putida KT2440 0.73 PP_1321 ClpXP protease specificity-enhancing factor 0.93 PP_4011 isocitrate dehydrogenase, NADP(+)-specific low > 96
Pectobacterium carotovorum WPP14 0.48 HER17_RS19930 ClpXP protease specificity-enhancing factor 0.77 HER17_RS11610 NADP-dependent isocitrate dehydrogenase — —
Shewanella amazonensis SB2B 0.47 Sama_3017 ClpXP protease specificity-enhancing factor (RefSeq) 0.21 Sama_2423 isocitrate dehydrogenase (RefSeq) — —
Pantoea sp. MT58 0.47 IAI47_17230 ClpXP protease specificity-enhancing factor 0.78 IAI47_11900 NADP-dependent isocitrate dehydrogenase — —
Erwinia tracheiphila SCR3 0.46 LU632_RS21325 sspB ClpXP protease specificity-enhancing factor 0.77 LU632_RS14560 icd NADP-dependent isocitrate dehydrogenase — —
Klebsiella michiganensis M5al 0.46 BWI76_RS25330 stringent starvation protein B 0.78 BWI76_RS11330 isocitrate dehydrogenase (NADP(+)) — —
Enterobacter sp. TBS_079 0.46 MPMX20_04132 Stringent starvation protein B 0.77 MPMX20_01820 Isocitrate dehydrogenase [NADP] — —
Shewanella sp. ANA-3 0.45 Shewana3_0605 ClpXP protease specificity-enhancing factor (RefSeq) 0.22 Shewana3_2890 isocitrate dehydrogenase (RefSeq) — —
Serratia liquefaciens MT49 0.45 IAI46_22360 ClpXP protease specificity-enhancing factor 0.78 IAI46_10460 NADP-dependent isocitrate dehydrogenase — —
Shewanella oneidensis MR-1 0.45 SO0612 sspB stringent starvation protein b (NCBI ptt file) 0.22 SO1538 isocitrate dehydrogenase, NAD-dependent (NCBI ptt file) — —
Dickeya dianthicola ME23 0.44 DZA65_RS01620 ClpXP protease specificity-enhancing factor 0.76 DZA65_RS11850 NADP-dependent isocitrate dehydrogenase — —
Dickeya dadantii 3937 0.44 DDA3937_RS01650 ClpXP protease specificity-enhancing factor 0.76 DDA3937_RS11470 NADP-dependent isocitrate dehydrogenase — —
Dickeya dianthicola 67-19 0.44 HGI48_RS01550 ClpXP protease specificity-enhancing factor 0.76 HGI48_RS11515 NADP-dependent isocitrate dehydrogenase — —
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.2232.1 Stringent starvation protein B 0.21 Xcc-8004.4057.1 Isocitrate dehydrogenase [NAD] (EC 1.1.1.41) — —
Dechlorosoma suillum PS 0.41 Dsui_1816 stringent starvation protein B 0.70 Dsui_3296 isocitrate dehydrogenase, NADP-dependent, prokaryotic type low > 51
Ralstonia solanacearum GMI1000 0.39 RS_RS14655 ClpXP protease specificity-enhancing factor 0.78 RS_RS12485 NADP-dependent isocitrate dehydrogenase — —
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_05673 stringent starvation protein B 0.78 H281DRAFT_04085 isocitrate dehydrogenase (NADP) low > 103
Ralstonia solanacearum IBSBF1503 0.39 RALBFv3_RS06710 ClpXP protease specificity-enhancing factor 0.78 RALBFv3_RS04855 isocitrate dehydrogenase (NADP(+)) — —
Ralstonia solanacearum UW163 0.39 UW163_RS06905 ClpXP protease specificity-enhancing factor 0.78 UW163_RS08770 isocitrate dehydrogenase (NADP(+)) — —
Ralstonia solanacearum PSI07 0.37 RPSI07_RS10525 ClpXP protease specificity-enhancing factor 0.79 RPSI07_RS12425 NADP-dependent isocitrate dehydrogenase — —
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS18805 peptidase 0.78 RR42_RS17135 isocitrate dehydrogenase low > 128
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS20225 starvation protein B 0.75 HSERO_RS07015 isocitrate dehydrogenase — —
Castellaniella sp019104865 MT123 0.37 ABCV34_RS12615 ClpXP protease specificity-enhancing factor 0.77 ABCV34_RS07265 NADP-dependent isocitrate dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS02365 ClpXP protease specificity-enhancing factor 0.77 ABZR87_RS00460 NADP-dependent isocitrate dehydrogenase — —

Not shown: 9 genomes with orthologs for PS417_04175 only; 35 genomes with orthologs for PS417_16525 only