Conservation of cofitness between PS417_16525 and PS417_14005 in Pseudomonas simiae WCS417

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_16525 isocitrate dehydrogenase 1.0 PS417_14005 4-hydroxyphenylpyruvate dioxygenase 0.27 20
Pseudomonas fluorescens SBW25 0.99 PFLU_RS18565 NADP-dependent isocitrate dehydrogenase 0.98 PFLU_RS14610 4-hydroxyphenylpyruvate dioxygenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS18565 NADP-dependent isocitrate dehydrogenase 0.98 PFLU_RS14610 4-hydroxyphenylpyruvate dioxygenase low > 109
Pseudomonas sp. RS175 0.98 PFR28_02616 Isocitrate dehydrogenase [NADP] 0.93 PFR28_02475 4-hydroxyphenylpyruvate dioxygenase low > 88
Pseudomonas fluorescens FW300-N2E2 0.98 Pf6N2E2_289 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 0.94 Pf6N2E2_456 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (from data) low > 103
Pseudomonas fluorescens FW300-N2E3 0.98 AO353_27690 isocitrate dehydrogenase 0.94 AO353_26925 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (from data) low > 101
Pseudomonas fluorescens FW300-N2C3 0.98 AO356_22135 isocitrate dehydrogenase 0.93 AO356_22845 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (from data) low > 104
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_2643 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 0.94 PfGW456L13_2935 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (from data) low > 87
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_4052 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 0.94 Pf1N1B4_5003 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) low > 87
Pseudomonas putida KT2440 0.93 PP_4011 isocitrate dehydrogenase, NADP(+)-specific 0.90 PP_3433 4-hydroxyphenylpyruvate dioxygenase 0.18 50
Pseudomonas sp. S08-1 0.93 OH686_00220 isocitrate dehydrogenase, NADP-dependent 0.51 OH686_21080 4-hydroxyphenylpyruvate dioxygenase — —
Pseudomonas stutzeri RCH2 0.90 Psest_2024 isocitrate dehydrogenase, NADP-dependent, prokaryotic type 0.51 Psest_3514 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (from data) low > 67
Variovorax sp. OAS795 0.80 ABID97_RS16920 NADP-dependent isocitrate dehydrogenase 0.56 ABID97_RS25360 4-hydroxyphenylpyruvate dioxygenase low > 91
Variovorax sp. SCN45 0.79 GFF343 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 0.57 GFF1962 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) low > 127
Ralstonia solanacearum PSI07 0.79 RPSI07_RS12425 NADP-dependent isocitrate dehydrogenase 0.58 RPSI07_RS09575 4-hydroxyphenylpyruvate dioxygenase — —
Cupriavidus basilensis FW507-4G11 0.78 RR42_RS17135 isocitrate dehydrogenase 0.78 RR42_RS33500 4-hydroxyphenylpyruvate dioxygenase low > 128
Acinetobacter radioresistens SK82 0.78 MPMX26_01012 Isocitrate dehydrogenase [NADP] 0.68 MPMX26_01476 4-hydroxyphenylpyruvate dioxygenase — —
Burkholderia phytofirmans PsJN 0.78 BPHYT_RS15730 isocitrate dehydrogenase 0.57 BPHYT_RS18295 4-hydroxyphenylpyruvate dioxygenase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.78 H281DRAFT_04085 isocitrate dehydrogenase (NADP) 0.56 H281DRAFT_05849 4-hydroxyphenylpyruvate dioxygenase 0.32 78
Paraburkholderia sabiae LMG 24235 0.78 QEN71_RS02980 NADP-dependent isocitrate dehydrogenase 0.78 QEN71_RS12110 4-hydroxyphenylpyruvate dioxygenase low > 153
Ralstonia solanacearum GMI1000 0.78 RS_RS12485 NADP-dependent isocitrate dehydrogenase 0.58 RS_RS15585 4-hydroxyphenylpyruvate dioxygenase — —
Ralstonia solanacearum IBSBF1503 0.78 RALBFv3_RS04855 isocitrate dehydrogenase (NADP(+)) 0.58 RALBFv3_RS07685 4-hydroxyphenylpyruvate dioxygenase — —
Ralstonia solanacearum UW163 0.78 UW163_RS08770 isocitrate dehydrogenase (NADP(+)) 0.58 UW163_RS05940 4-hydroxyphenylpyruvate dioxygenase — —
Paraburkholderia graminis OAS925 0.77 ABIE53_003317 isocitrate dehydrogenase 0.56 ABIE53_000012 4-hydroxyphenylpyruvate dioxygenase low > 113
Ralstonia sp. UNC404CL21Col 0.77 ABZR87_RS00460 NADP-dependent isocitrate dehydrogenase 0.58 ABZR87_RS03395 4-hydroxyphenylpyruvate dioxygenase — —
Castellaniella sp019104865 MT123 0.77 ABCV34_RS07265 NADP-dependent isocitrate dehydrogenase 0.52 ABCV34_RS09775 4-hydroxyphenylpyruvate dioxygenase — —
Acidovorax sp. GW101-3H11 0.77 Ac3H11_2377 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 0.74 Ac3H11_1849 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (from data) low > 79
Dickeya dadantii 3937 0.76 DDA3937_RS11470 NADP-dependent isocitrate dehydrogenase 0.57 DDA3937_RS21335 4-hydroxyphenylpyruvate dioxygenase — —
Dickeya dianthicola ME23 0.76 DZA65_RS11850 NADP-dependent isocitrate dehydrogenase 0.59 DZA65_RS22650 4-hydroxyphenylpyruvate dioxygenase — —
Dickeya dianthicola 67-19 0.76 HGI48_RS11515 NADP-dependent isocitrate dehydrogenase 0.59 HGI48_RS21665 4-hydroxyphenylpyruvate dioxygenase — —
Herbaspirillum seropedicae SmR1 0.75 HSERO_RS07015 isocitrate dehydrogenase 0.59 HSERO_RS08335 4-hydroxyphenylpyruvate dioxygenase low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.71 GFF4515 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 0.55 GFF1741 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) low > 90
Shewanella sp. ANA-3 0.22 Shewana3_2890 isocitrate dehydrogenase (RefSeq) 0.39 Shewana3_2482 4-hydroxyphenylpyruvate dioxygenase (RefSeq) — —
Lysobacter sp. OAE881 0.22 ABIE51_RS14200 isocitrate dehydrogenase 0.51 ABIE51_RS04075 4-hydroxyphenylpyruvate dioxygenase — —
Shewanella oneidensis MR-1 0.22 SO1538 isocitrate dehydrogenase, NAD-dependent (NCBI ptt file) 0.40 SO1962 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (from data) — —
Shewanella amazonensis SB2B 0.21 Sama_2423 isocitrate dehydrogenase (RefSeq) 0.40 Sama_1568 4-hydroxyphenylpyruvate dioxygenase (RefSeq) — —
Xanthomonas campestris pv. campestris strain 8004 0.21 Xcc-8004.4057.1 Isocitrate dehydrogenase [NAD] (EC 1.1.1.41) 0.49 Xcc-8004.578.1 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.21 CA264_17775 isocitrate dehydrogenase 0.23 CA264_09345 4-hydroxyphenylpyruvate dioxygenase — —

Not shown: 32 genomes with orthologs for PS417_16525 only; 21 genomes with orthologs for PS417_14005 only