Conservation of cofitness between GFF1973 and GFF2738 in Hydrogenophaga sp. GW460-11-11-14-LB1

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF1973 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 1.0 GFF2738 Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) 0.74 16
Acidovorax sp. GW101-3H11 0.72 Ac3H11_4848 D-alanine dehydrogenase (EC 1.4.99.-) (from data) 0.43 Ac3H11_4342 Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) low > 79
Variovorax sp. SCN45 0.45 GFF6883 D-amino acid dehydrogenase (EC 1.4.99.6) 0.85 GFF3791 Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) low > 127
Variovorax sp. OAS795 0.45 ABID97_RS05655 D-amino acid dehydrogenase 0.84 ABID97_RS00095 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme low > 91
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS07275 D-amino acid dehydrogenase 0.47 HSERO_RS23240 omega amino acid--pyruvate aminotransferase low > 78
Castellaniella sp019104865 MT123 0.41 ABCV34_RS06160 D-amino acid dehydrogenase 0.50 ABCV34_RS08825 aspartate aminotransferase family protein low > 48
Azospirillum sp. SherDot2 0.38 MPMX19_06097 D-amino acid dehydrogenase 1 0.45 MPMX19_05489 Beta-alanine--pyruvate aminotransferase low > 112
Azospirillum brasilense Sp245 0.38 AZOBR_RS08020 D-alanine dehydrogenase (EC 1.4.99.-) (from data) 0.44 AZOBR_RS22505 omega amino acid--pyruvate aminotransferase low > 97
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS09560 D-amino acid dehydrogenase 0.52 ABZR87_RS19660 aspartate aminotransferase family protein low > 80
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS13870 D-amino acid dehydrogenase small subunit 0.51 RALBFv3_RS18720 aspartate aminotransferase family protein low > 76
Ralstonia solanacearum UW163 0.36 UW163_RS15940 D-amino acid dehydrogenase small subunit 0.51 UW163_RS20410 aspartate aminotransferase family protein — —
Agrobacterium fabrum C58 0.36 Atu3293 D-amino acid dehydrogenase small subunit 0.52 Atu3329 beta alanine--pyruvate transaminase 0.43 3
Ralstonia solanacearum PSI07 0.36 RPSI07_RS19600 D-amino acid dehydrogenase small subunit 0.52 RPSI07_RS04875 aspartate aminotransferase family protein low > 81
Ralstonia solanacearum GMI1000 0.36 RS_RS04605 D-amino acid dehydrogenase small subunit 0.52 RS_RS22230 aspartate aminotransferase family protein low > 80
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_812 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.42 PfGW456L13_3 Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) low > 87
Pseudomonas simiae WCS417 0.35 PS417_27705 amino acid dehydrogenase 0.43 PS417_11165 omega amino acid--pyruvate aminotransferase — —
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_2144 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.42 Pf1N1B4_1239 Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) 0.26 64
Rhodospirillum rubrum S1H 0.35 Rru_A1546 FAD dependent oxidoreductase (NCBI) 0.42 Rru_A1541 Aminotransferase class-III (NCBI) — —
Pseudomonas putida KT2440 0.35 PP_4434 D-amino acid dehydrogenase 1 small subunit 0.41 PP_0596 Omega-amino acid--pyruvate aminotransferase low > 96
Pseudomonas sp. RS175 0.34 PFR28_04399 D-amino acid dehydrogenase 1 0.41 PFR28_05262 Omega-amino acid--pyruvate aminotransferase 0.44 39
Serratia liquefaciens MT49 0.34 IAI46_14460 D-amino acid dehydrogenase 0.43 IAI46_02645 aspartate aminotransferase family protein 0.47 37
Pseudomonas fluorescens SBW25 0.34 PFLU_RS29380 D-amino acid dehydrogenase 0.42 PFLU_RS03325 aspartate aminotransferase family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.34 PFLU_RS29380 D-amino acid dehydrogenase 0.42 PFLU_RS03325 aspartate aminotransferase family protein low > 109
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_12620 amino acid dehydrogenase 0.42 AO356_07955 omega amino acid--pyruvate aminotransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_4391 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.42 Pf6N2E2_3463 Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) low > 103
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_09155 amino acid dehydrogenase 0.42 AO353_06085 omega amino acid--pyruvate aminotransferase 0.36 58
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_0235 D-amino acid dehydrogenase small subunit 0.41 Psyr_0678 Aminotransferase class-III low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_0235 D-amino acid dehydrogenase small subunit 0.41 Psyr_0678 Aminotransferase class-III low > 86
Xanthomonas campestris pv. campestris strain 8004 0.34 Xcc-8004.4621.1 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.47 Xcc-8004.2192.1 Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) low > 74
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS04585 amino acid dehydrogenase 0.53 RR42_RS01575 omega amino acid--pyruvate aminotransferase low > 128
Pseudomonas sp. S08-1 0.34 OH686_13685 D-amino acid dehydrogenase 0.45 OH686_07315 Omega-amino acid--pyruvate aminotransferase low > 80
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_04287 D-amino-acid dehydrogenase 0.50 H281DRAFT_01578 beta-alanine--pyruvate transaminase low > 103
Paraburkholderia graminis OAS925 0.33 ABIE53_003133 D-amino-acid dehydrogenase 0.50 ABIE53_004258 beta-alanine--pyruvate transaminase low > 113
Pseudomonas stutzeri RCH2 0.33 Psest_3793 D-alanine dehydrogenase (EC 1.4.99.-) (from data) 0.49 Psest_4306 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 67
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS04190 D-amino acid dehydrogenase 0.52 QEN71_RS18155 aspartate aminotransferase family protein low > 153
Dinoroseobacter shibae DFL-12 0.33 Dshi_0558 D-amino-acid dehydrogenase (RefSeq) 0.49 Dshi_1366 aminotransferase class-III (RefSeq) low > 64
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS17845 amino acid dehydrogenase 0.50 BPHYT_RS21555 beta alanine--pyruvate aminotransferase low > 109

Not shown: 33 genomes with orthologs for GFF1973 only; 10 genomes with orthologs for GFF2738 only