Conservation of cofitness between Psest_3433 and Psest_2461 in Pseudomonas stutzeri RCH2

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3433 ATP-binding cassette protein, ChvD family 1.0 Psest_2461 tRNA 2-selenouridine synthase 0.30 16
Pseudomonas sp. S08-1 0.94 OH686_16240 Energy-dependent translational throttle protein EttA 0.75 OH686_21215 tRNA 2-selenouridine synthase low > 80
Pseudomonas putida KT2440 0.92 PP_0674 ADP/ATP ratio sensor and inhibitor of translation 0.73 PP_0822 tRNA 2-selenouridine synthase low > 96
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_15735 ABC transporter ATP-binding protein 0.72 AO356_01390 tRNA 2-selenouridine synthase low > 104
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_5084 Glutathione-regulated potassium-efflux system ATP-binding protein 0.73 Pf6N2E2_2150 Selenophosphate-dependent tRNA 2-selenouridine synthase low > 103
Pseudomonas sp. RS175 0.91 PFR28_03784 Energy-dependent translational throttle protein EttA 0.73 PFR28_01286 tRNA 2-selenouridine synthase low > 88
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_4264 ABC transporter 0.74 Psyr_0697 tRNA 2-selenouridine synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_4264 ABC transporter 0.74 Psyr_0697 tRNA 2-selenouridine synthase low > 86
Pseudomonas fluorescens GW456-L13 0.91 PfGW456L13_1453 Glutathione-regulated potassium-efflux system ATP-binding protein 0.76 PfGW456L13_2463 Selenophosphate-dependent tRNA 2-selenouridine synthase low > 87
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_14030 ABC transporter ATP-binding protein 0.75 AO353_00045 tRNA 2-selenouridine synthase low > 101
Pseudomonas simiae WCS417 0.91 PS417_24265 ABC transporter ATP-binding protein 0.74 PS417_10465 tRNA 2-selenouridine synthase low > 88
Marinobacter adhaerens HP15 0.76 HP15_488 ABC transporter ATP-binding protein-like protein 0.52 HP15_3380 rhodanese domain protein low > 73
Enterobacter sp. TBS_079 0.74 MPMX20_00698 Energy-dependent translational throttle protein EttA 0.42 MPMX20_01096 tRNA 2-selenouridine synthase low > 85
Enterobacter asburiae PDN3 0.74 EX28DRAFT_3601 ATP-binding cassette protein, ChvD family 0.43 EX28DRAFT_2461 tRNA 2-selenouridine synthase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF1059 ABC transporter, ATP-binding protein 0.42 GFF4419 Selenophosphate-dependent tRNA 2-selenouridine synthase low > 78
Escherichia coli ECRC99 0.74 KEDOAH_16980 ettA energy-dependent translational throttle protein EttA 0.40 KEDOAH_20025 mnmH tRNA 2-selenouridine(34) synthase MnmH — —
Escherichia coli ECRC98 0.74 JDDGAC_14770 ettA energy-dependent translational throttle protein EttA 0.40 JDDGAC_11590 mnmH tRNA 2-selenouridine(34) synthase MnmH — —
Klebsiella michiganensis M5al 0.74 BWI76_RS04175 energy-dependent translational throttle protein EttA 0.41 BWI76_RS06970 selenophosphate-dependent tRNA 2-selenouridine synthase low > 92
Escherichia fergusonii Becca 0.74 EFB2_04053 Energy-dependent translational throttle protein EttA 0.40 EFB2_03558 tRNA 2-selenouridine synthase low > 86
Escherichia coli ECRC101 0.74 OKFHMN_11175 ettA energy-dependent translational throttle protein EttA 0.40 OKFHMN_07945 mnmH tRNA 2-selenouridine(34) synthase MnmH — —
Escherichia coli BL21 0.74 ECD_04267 energy-dependent translational throttle A 0.40 ECD_00453 tRNA 2-selenouridine synthase, selenophosphate-dependent low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.74 OHPLBJKB_03670 Energy-dependent translational throttle protein EttA 0.40 OHPLBJKB_03177 tRNA 2-selenouridine synthase low > 73
Escherichia coli ECRC102 0.74 NIAGMN_09025 ettA energy-dependent translational throttle protein EttA 0.40 NIAGMN_05995 mnmH tRNA 2-selenouridine(34) synthase MnmH — —
Escherichia coli BW25113 0.74 b4391 yjjK fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) 0.40 b0503 ybbB tRNA 2-selenouridine synthase, selenophosphate-dependent (NCBI) low > 76
Escherichia coli ECRC62 0.74 BNILDI_08090 ettA energy-dependent translational throttle protein EttA 0.40 BNILDI_22355 mnmH tRNA 2-selenouridine(34) synthase MnmH — —
Escherichia coli ECRC101 0.74 MCAODC_01690 ettA energy-dependent translational throttle protein EttA 0.40 MCAODC_27160 mnmH tRNA 2-selenouridine(34) synthase MnmH — —
Escherichia coli ECOR27 0.74 NOLOHH_03505 ettA energy-dependent translational throttle protein EttA 0.41 NOLOHH_00925 mnmH tRNA 2-selenouridine(34) synthase MnmH low > 57
Escherichia coli ECOR38 0.74 HEPCGN_09180 ettA energy-dependent translational throttle protein EttA 0.40 HEPCGN_06580 mnmH tRNA 2-selenouridine(34) synthase MnmH low > 85
Serratia liquefaciens MT49 0.74 IAI46_02965 energy-dependent translational throttle protein EttA 0.48 IAI46_14310 tRNA 2-selenouridine(34) synthase MnmH low > 86
Shewanella amazonensis SB2B 0.72 Sama_1013 putative ABC transporter ATP-binding protein (RefSeq) 0.49 Sama_0189 tRNA 2-selenouridine synthase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.72 SO3472 ABC transporter, ATP-binding protein (NCBI ptt file) 0.48 SO0195 ybbB ybbB protein (NCBI ptt file) low > 76
Paraburkholderia graminis OAS925 0.72 ABIE53_003656 sulfate-transporting ATPase 0.16 ABIE53_004984 tRNA 2-selenouridine synthase low > 113
Shewanella sp. ANA-3 0.72 Shewana3_1093 putative ABC transporter ATP-binding protein (RefSeq) 0.46 Shewana3_0175 tRNA 2-selenouridine synthase (RefSeq) low > 73
Shewanella loihica PV-4 0.72 Shew_1183 putative ABC transporter ATP-binding protein (RefSeq) 0.46 Shew_0134 tRNA 2-selenouridine synthase (RefSeq) low > 60
Herbaspirillum seropedicae SmR1 0.72 HSERO_RS23550 ABC transporter ATP-binding protein 0.62 HSERO_RS15815 tRNA 2-selenouridine synthase low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.70 GFF3531 ABC transporter 0.14 GFF4848 Selenophosphate-dependent tRNA 2-selenouridine synthase low > 90
Dechlorosoma suillum PS 0.70 Dsui_2746 ATP-binding cassette protein, ChvD family 0.17 Dsui_2310 tRNA 2-selenouridine synthase low > 51
Cupriavidus basilensis FW507-4G11 0.70 RR42_RS18575 ABC transporter ATP-binding protein 0.61 RR42_RS01810 tRNA 2-selenouridine synthase low > 128
Castellaniella sp019104865 MT123 0.69 ABCV34_RS08155 energy-dependent translational throttle protein EttA 0.17 ABCV34_RS06655 tRNA 2-selenouridine(34) synthase MnmH low > 48
Acidovorax sp. GW101-3H11 0.69 Ac3H11_387 ABC transporter ATP-binding protein 0.59 Ac3H11_1764 Selenophosphate-dependent tRNA 2-selenouridine synthase — —
Desulfovibrio vulgaris Hildenborough JW710 0.58 DVU2586 ABC transporter, ATP-binding protein (TIGR) 0.20 DVU0568 rhodanese-like domain protein (TIGR) low > 55
Phaeobacter inhibens DSM 17395 0.56 PGA1_c26300 ABC transporter, ATP-binding protein 0.18 PGA1_c12200 tRNA 2-selenouridine synthase SelU low > 62
Dinoroseobacter shibae DFL-12 0.56 Dshi_2197 ABC transporter related (RefSeq) 0.17 Dshi_3349 Rhodanese domain protein (RefSeq) low > 64

Not shown: 56 genomes with orthologs for Psest_3433 only; 2 genomes with orthologs for Psest_2461 only