| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Sphingobium sp. HT1-2 | 1.0 | GFF3048 | | Two-component nitrogen fixation transcriptional regulator FixJ | 1.0 | GFF233 | | 'Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II' transl_table=11 | 0.88 | 15 |
| Sinorhizobium meliloti 1021 | 0.48 | SMa1227 | | response regulator FixJ | 0.41 | SMc02659 | | GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein | low | > 103 |
| Rhodopseudomonas palustris CGA009 | 0.45 | TX73_022010 | | response regulator FixJ | 0.43 | TX73_013955 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Marinobacter adhaerens HP15 | 0.44 | HP15_1053 | | two component transcriptional regulator, LuxR family | 0.35 | HP15_305 | | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 73 |
| Azospirillum sp. SherDot2 | 0.44 | MPMX19_03016 | | Response regulator protein TmoT | 0.52 | MPMX19_00838 | | GTP pyrophosphokinase rsh | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.42 | RR42_RS07355 | | LuxR family transcriptional regulator | 0.36 | RR42_RS04920 | | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Ralstonia solanacearum PSI07 | 0.41 | RPSI07_RS15805 | | DNA-binding response regulator | 0.36 | RPSI07_RS13870 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.41 | QEN71_RS05715 | | oxygen response regulator transcription factor FixJ | 0.35 | QEN71_RS03665 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Dechlorosoma suillum PS | 0.41 | Dsui_2511 | | response regulator | 0.37 | Dsui_0500 | | (p)ppGpp synthetase, RelA/SpoT family | low | > 51 |
| Ralstonia sp. UNC404CL21Col | 0.41 | ABZR87_RS13480 | | response regulator transcription factor | 0.36 | ABZR87_RS15225 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Ralstonia solanacearum GMI1000 | 0.41 | RS_RS08045 | | DNA-binding response regulator | 0.36 | RS_RS10800 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.41 | RALBFv3_RS01680 | | DNA-binding response regulator | 0.36 | RALBFv3_RS03315 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Ralstonia solanacearum UW163 | 0.41 | UW163_RS14990 | | DNA-binding response regulator | 0.36 | UW163_RS10410 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Shewanella loihica PV-4 | 0.41 | Shew_3240 | | two component LuxR family transcriptional regulator (RefSeq) | 0.33 | Shew_3499 | | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (RefSeq) | low | > 60 |
| Paraburkholderia graminis OAS925 | 0.41 | ABIE53_002795 | | FixJ family two-component response regulator | 0.34 | ABIE53_003230 | | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.41 | H281DRAFT_00464 | | two component transcriptional regulator, LuxR family | 0.34 | H281DRAFT_04004 | | (p)ppGpp synthetase I, SpoT/RelA | — | — |
| Burkholderia phytofirmans PsJN | 0.41 | BPHYT_RS12850 | | LuxR family transcriptional regulator | 0.35 | BPHYT_RS15305 | | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Castellaniella sp019104865 MT123 | 0.41 | ABCV34_RS04170 | | response regulator transcription factor | 0.34 | ABCV34_RS03095 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.41 | A4249_RS15535 | | response regulator | 0.45 | A4249_RS05505 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Shewanella oneidensis MR-1 | 0.39 | SO4157 | | DNA-binding response regulator (NCBI ptt file) | 0.33 | SO0359 | spoT | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (NCBI ptt file) | low | > 76 |
| Variovorax sp. OAS795 | 0.39 | ABID97_RS14090 | | response regulator transcription factor | 0.32 | ABID97_RS23670 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Shewanella sp. ANA-3 | 0.39 | Shewana3_3697 | | two component LuxR family transcriptional regulator (RefSeq) | 0.33 | Shewana3_3812 | | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (RefSeq) | low | > 73 |
| Dyella japonica UNC79MFTsu3.2 | 0.39 | ABZR86_RS13745 | | response regulator | 0.34 | ABZR86_RS11850 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.39 | GFF4893 | | Nitrogen regulation protein NR(I) | 0.32 | GFF1034 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | — | — |
| Variovorax sp. SCN45 | 0.39 | GFF965 | | Two-component transcriptional response regulator, LuxR family | 0.32 | GFF2375 | | Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.38 | PfGW456L13_3749 | | Nitrogen regulation protein NR(I) | 0.35 | PfGW456L13_780 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | — | — |
| Acidovorax sp. GW101-3H11 | 0.38 | Ac3H11_4095 | | Nitrogen regulation protein NR(I) | 0.32 | Ac3H11_3664 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | — | — |
| Pseudomonas putida KT2440 | 0.38 | PP_3551 | | DNA-binding response regulator, LuxR family | 0.35 | PP_5302 | | bifunctional (p)ppGpp synthase/hydrolase | — | — |
| Pseudomonas aeruginosa PA14 | 0.37 | IKLFDK_21605 | | two-component system response regulator BfiR | 0.35 | IKLFDK_26765 | | bifunctional GTP diphosphokinase/guanosine-3' 5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Pseudomonas segetis P6 | 0.37 | MPMX49_02030 | | Response regulator protein TodT | 0.35 | MPMX49_00036 | | Bifunctional (p)ppGpp synthase/hydrolase SpoT | — | — |
| Herbaspirillum seropedicae SmR1 | 0.37 | HSERO_RS06700 | | LuxR family transcriptional regulator | 0.35 | HSERO_RS10635 | | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Shewanella amazonensis SB2B | 0.36 | Sama_3183 | | response regulator receiver protein (RefSeq) | 0.34 | Sama_0264 | | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (RefSeq) | low | > 62 |
| Pseudomonas fluorescens FW300-N2C3 | 0.36 | AO356_25435 | | nodulation protein NolW | 0.35 | AO356_12480 | | (p)ppGpp synthetase | — | — |
| Serratia liquefaciens MT49 | 0.33 | IAI46_06840 | | response regulator transcription factor | 0.33 | IAI46_24895 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 87 |
Not shown: 0 genomes with orthologs for GFF3048 only; 88 genomes with orthologs for GFF233 only