Conservation of cofitness between GFF4258 and GFF2216 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4258 Ferrichrome-iron receptor 1.0 GFF2216 DNA polymerase I (EC 2.7.7.7) 0.52 13
Klebsiella michiganensis M5al 0.91 BWI76_RS05630 TonB-dependent siderophore receptor 0.88 BWI76_RS00355 DNA polymerase I low > 92
Enterobacter sp. TBS_079 0.88 MPMX20_00608 Ferrichrome outer membrane transporter/phage receptor 0.90 MPMX20_04601 DNA polymerase I low > 85
Pectobacterium carotovorum WPP14 0.76 HER17_RS02320 TonB-dependent siderophore receptor 0.77 HER17_RS21470 DNA polymerase I — —
Pseudomonas putida KT2440 0.44 PP_0160 putative ferrioxamine receptor 0.58 PP_0123 DNA polymerase I, 5 low > 96
Pseudomonas sp. RS175 0.44 PFR28_04773 Ferrichrome outer membrane transporter/phage receptor 0.55 PFR28_04624 DNA polymerase I low > 88
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_1813 Ferrichrome-iron receptor 0.55 Pf1N1B4_1875 DNA polymerase I (EC 2.7.7.7) — —
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_3994 Ferrichrome-iron receptor 0.56 Pf6N2E2_4162 DNA polymerase I (EC 2.7.7.7) low > 103
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_10630 ferrioxamine B receptor 0.56 AO356_11465 DNA polymerase I low > 104
Pseudomonas stutzeri RCH2 0.40 Psest_4337 TonB-dependent siderophore receptor 0.60 Psest_4219 DNA polymerase I low > 67
Ralstonia sp. UNC404CL21Col 0.40 ABZR87_RS12840 TonB-dependent siderophore receptor 0.51 ABZR87_RS15680 DNA polymerase I low > 80
Serratia liquefaciens MT49 0.37 IAI46_14410 TonB-dependent siderophore receptor 0.77 IAI46_24985 DNA polymerase I low > 86
Pseudomonas sp. S08-1 0.37 OH686_02350 Ferrichrome-iron receptor 0.58 OH686_12215 DNA polymerase I low > 80
Rahnella sp. WP5 0.35 EX31_RS10760 TonB-dependent siderophore receptor 0.77 EX31_RS15905 DNA polymerase I low > 89
Pantoea sp. MT58 0.35 IAI47_11760 TonB-dependent siderophore receptor 0.76 IAI47_00430 DNA polymerase I low > 76
Herbaspirillum seropedicae SmR1 0.26 HSERO_RS22550 ligand-gated channel protein 0.52 HSERO_RS02260 DNA polymerase I low > 78
Shewanella amazonensis SB2B 0.25 Sama_2875 outer membrane protein (RefSeq) 0.64 Sama_0093 DNA-directed DNA polymerase (RefSeq) low > 62
Sphingomonas koreensis DSMZ 15582 0.25 Ga0059261_3607 TonB-dependent siderophore receptor 0.37 Ga0059261_2244 DNA polymerase I (EC 2.7.7.7) low > 68
Vibrio cholerae E7946 ATCC 55056 0.24 CSW01_01065 TonB-dependent siderophore receptor 0.65 CSW01_00560 DNA polymerase I low > 62
Phaeobacter inhibens DSM 17395 0.21 PGA1_c25980 ferrichrome-iron receptor 0.39 PGA1_c31780 DNA polymerase I low > 62
Alteromonas macleodii MIT1002 0.20 MIT1002_01786 Ferric hydroxamate uptake 0.63 MIT1002_00014 DNA polymerase I low > 70
Cupriavidus basilensis FW507-4G11 0.18 RR42_RS31760 IclR family transcriptional regulator 0.49 RR42_RS15050 DNA polymerase I low > 128
Pseudomonas fluorescens FW300-N2E3 0.15 AO353_05095 TonB-dependent receptor 0.56 AO353_10930 DNA polymerase I low > 101
Shewanella sp. ANA-3 0.15 Shewana3_0983 TonB-dependent siderophore receptor (RefSeq) 0.64 Shewana3_4109 DNA polymerase I (RefSeq) — —
Rhodanobacter sp. FW510-T8 0.14 OKGIIK_11115 fiu Outer membrane receptor for monomeric catechols 0.50 OKGIIK_16785 polA DNA polymerase I low > 52
Shewanella oneidensis MR-1 0.13 SO1156 TonB-dependent receptor (NCBI ptt file) 0.64 SO4669 polA DNA polymerase I (NCBI ptt file) — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.13 Echvi_3406 TonB-dependent siderophore receptor 0.38 Echvi_1032 DNA polymerase I low > 79
Caulobacter crescentus NA1000 Δfur 0.12 CCNA_01856 ferrichrome-iron receptor 0.39 CCNA_03577 DNA polymerase I low > 67
Caulobacter crescentus NA1000 0.12 CCNA_01856 ferrichrome-iron receptor 0.39 CCNA_03577 DNA polymerase I low > 66
Dyella japonica UNC79MFTsu3.2 0.10 ABZR86_RS09175 catecholate siderophore receptor Fiu 0.51 ABZR86_RS17015 DNA polymerase I low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.10 CA265_RS06935 TonB-dependent siderophore receptor 0.37 CA265_RS19630 DNA polymerase I low > 88
Brevundimonas sp. GW460-12-10-14-LB2 0.08 A4249_RS10655 TonB-dependent receptor 0.37 A4249_RS13840 DNA polymerase I — —
Erwinia tracheiphila SCR3 0.06 LU632_RS10235 TonB-dependent siderophore receptor 0.77 LU632_RS23870 polA DNA polymerase I — —

Not shown: 0 genomes with orthologs for GFF4258 only; 68 genomes with orthologs for GFF2216 only