Conservation of cofitness between HP15_549 and HP15_2116 in Marinobacter adhaerens HP15

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_549 stringent starvation protein B 1.0 HP15_2116 PP-loop domain protein 0.35 12
Pseudomonas sp. S08-1 0.50 OH686_08370 Stringent starvation protein B 0.64 OH686_05145 tRNA-(cytosine32)-2-thiocytidine synthetase TtcA low > 80
Pseudomonas stutzeri RCH2 0.49 Psest_3275 Stringent starvation protein B 0.65 Psest_3033 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control low > 67
Pseudomonas putida KT2440 0.48 PP_1321 ClpXP protease specificity-enhancing factor 0.63 PP_1641 tRNA 2-thiocytidine biosynthesis protein TtcA low > 96
Pseudomonas simiae WCS417 0.47 PS417_04175 peptidase 0.63 PS417_16415 tRNA 2-thiocytidine biosynthesis protein TtcA low > 88
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS04215 ClpXP protease specificity-enhancing factor 0.62 PFLU_RS18455 tRNA 2-thiocytidine(32) synthetase TtcA low > 109
Pseudomonas fluorescens SBW25 0.46 PFLU_RS04215 ClpXP protease specificity-enhancing factor 0.62 PFLU_RS18455 tRNA 2-thiocytidine(32) synthetase TtcA low > 109
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_4117 Stringent starvation protein B 0.63 Psyr_3705 conserved hypothetical protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_4117 Stringent starvation protein B 0.63 Psyr_3705 conserved hypothetical protein low > 86
Pseudomonas sp. RS175 0.46 PFR28_03602 Stringent starvation protein B 0.63 PFR28_03236 tRNA-cytidine(32) 2-sulfurtransferase low > 88
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_17085 peptidase 0.62 AO356_19000 tRNA 2-thiocytidine biosynthesis protein TtcA low > 104
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_03065 ClpXP protease specificity-enhancing factor 0.65 CSW01_07180 tRNA 2-thiocytidine(32) synthetase TtcA low > 62
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_5341 Stringent starvation protein B 0.63 Pf6N2E2_5711 tRNA(Cytosine32)-2-thiocytidine synthetase low > 103
Dickeya dianthicola 67-19 0.44 HGI48_RS01550 ClpXP protease specificity-enhancing factor 0.65 HGI48_RS12410 tRNA 2-thiocytidine(32) synthetase TtcA low > 71
Pantoea sp. MT58 0.44 IAI47_17230 ClpXP protease specificity-enhancing factor 0.66 IAI47_09475 tRNA 2-thiocytidine(32) synthetase TtcA low > 76
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_15265 peptidase 0.63 AO353_02780 tRNA 2-thiocytidine biosynthesis protein TtcA low > 101
Dickeya dadantii 3937 0.44 DDA3937_RS01650 ClpXP protease specificity-enhancing factor 0.65 DDA3937_RS12330 tRNA 2-thiocytidine(32) synthetase TtcA low > 74
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_958 Stringent starvation protein B 0.63 Pf1N1B4_3491 tRNA(Cytosine32)-2-thiocytidine synthetase 0.28 18
Dickeya dianthicola ME23 0.44 DZA65_RS01620 ClpXP protease specificity-enhancing factor 0.66 DZA65_RS12850 tRNA 2-thiocytidine(32) synthetase TtcA low > 75
Escherichia coli ECRC99 0.44 KEDOAH_10315 sspB ClpXP protease specificity-enhancing factor 0.65 KEDOAH_26600 ttcA tRNA 2-thiocytidine(32) synthetase TtcA — —
Escherichia coli ECRC101 0.44 MCAODC_08355 sspB ClpXP protease specificity-enhancing factor 0.65 MCAODC_16100 ttcA tRNA 2-thiocytidine(32) synthetase TtcA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_00476 Stringent starvation protein B 0.65 OHPLBJKB_02337 tRNA-cytidine(32) 2-sulfurtransferase low > 73
Escherichia coli ECRC98 0.44 JDDGAC_21460 sspB ClpXP protease specificity-enhancing factor 0.65 JDDGAC_04715 ttcA tRNA 2-thiocytidine(32) synthetase TtcA — —
Escherichia coli ECRC62 0.44 BNILDI_01900 sspB ClpXP protease specificity-enhancing factor 0.65 BNILDI_18020 ttcA tRNA 2-thiocytidine(32) synthetase TtcA — —
Escherichia coli BW25113 0.44 b3228 sspB ClpXP protease specificity-enhancing factor (NCBI) 0.65 b1344 ydaO predicted C32 tRNA thiolase (NCBI) low > 76
Escherichia coli BL21 0.44 ECD_03088 ClpXP protease specificity enhancing factor 0.65 ECD_01321 tRNA s(2)C32 thioltransferase, iron sulfur cluster protein low > 60
Escherichia coli ECRC101 0.44 OKFHMN_17835 sspB ClpXP protease specificity-enhancing factor 0.65 OKFHMN_02155 ttcA tRNA 2-thiocytidine(32) synthetase TtcA — —
Escherichia coli ECOR27 0.44 NOLOHH_09635 sspB ClpXP protease specificity-enhancing factor 0.65 NOLOHH_19870 ttcA tRNA 2-thiocytidine(32) synthetase TtcA — —
Escherichia coli ECRC102 0.44 NIAGMN_15595 sspB ClpXP protease specificity-enhancing factor 0.65 NIAGMN_26325 ttcA tRNA 2-thiocytidine(32) synthetase TtcA — —
Pectobacterium carotovorum WPP14 0.43 HER17_RS19930 ClpXP protease specificity-enhancing factor 0.65 HER17_RS09605 tRNA 2-thiocytidine(32) synthetase TtcA low > 75
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_1638 Stringent starvation protein B 0.62 PfGW456L13_2020 tRNA(Cytosine32)-2-thiocytidine synthetase low > 87
Shewanella oneidensis MR-1 0.43 SO0612 sspB stringent starvation protein b (NCBI ptt file) 0.65 SO2354 conserved hypothetical protein (NCBI ptt file) — —
Alteromonas macleodii MIT1002 0.43 MIT1002_00818 Stringent starvation protein B 0.64 MIT1002_02139 tRNA 2-thiocytidine biosynthesis protein TtcA low > 70
Enterobacter asburiae PDN3 0.43 EX28DRAFT_3277 Stringent starvation protein B 0.65 EX28DRAFT_1007 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control low > 76
Escherichia coli Nissle 1917 0.43 ECOLIN_RS18515 ClpXP protease specificity-enhancing factor 0.65 ECOLIN_RS08065 tRNA 2-thiocytidine(32) synthetase TtcA — —
Escherichia fergusonii Becca 0.43 EFB2_00602 Stringent starvation protein B 0.65 EFB2_02583 tRNA-cytidine(32) 2-sulfurtransferase low > 86
Escherichia coli ECOR38 0.43 HEPCGN_16710 sspB ClpXP protease specificity-enhancing factor 0.65 HEPCGN_26005 ttcA tRNA 2-thiocytidine(32) synthetase TtcA low > 85
Enterobacter sp. TBS_079 0.42 MPMX20_04132 Stringent starvation protein B 0.64 MPMX20_02440 tRNA-cytidine(32) 2-sulfurtransferase low > 85
Rahnella sp. WP5 0.42 EX31_RS12505 ClpXP protease specificity-enhancing factor 0.65 EX31_RS06375 tRNA 2-thiocytidine(32) synthetase TtcA low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF2967 ClpXP protease specificity-enhancing factor / Stringent starvation protein B 0.65 GFF2648 tRNA(Cytosine32)-2-thiocytidine synthetase low > 78
Klebsiella michiganensis M5al 0.42 BWI76_RS25330 stringent starvation protein B 0.65 BWI76_RS12710 tRNA 2-thiocytidine(32) synthetase TtcA — —
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_03025 sspB ClpXP protease specificity-enhancing factor 0.54 OKGIIK_13200 ttcA tRNA 2-thiocytidine(32) synthetase TtcA low > 52
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS13785 ClpXP protease specificity-enhancing factor 0.56 LRK54_RS10680 tRNA 2-thiocytidine(32) synthetase TtcA low > 59
Rhodanobacter denitrificans MT42 0.41 LRK55_RS13500 ClpXP protease specificity-enhancing factor 0.57 LRK55_RS10320 tRNA 2-thiocytidine(32) synthetase TtcA low > 63
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS09860 ClpXP protease specificity-enhancing factor 0.62 ABZR86_RS16485 tRNA 2-thiocytidine(32) synthetase TtcA low > 74
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.2232.1 Stringent starvation protein B 0.55 Xcc-8004.5211.1 tRNA(Cytosine32)-2-thiocytidine synthetase low > 74
Castellaniella sp019104865 MT123 0.37 ABCV34_RS12615 ClpXP protease specificity-enhancing factor 0.55 ABCV34_RS10450 tRNA 2-thiocytidine(32) synthetase TtcA low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF1291 ClpXP protease specificity-enhancing factor / Stringent starvation protein B 0.57 GFF1658 tRNA(Cytosine32)-2-thiocytidine synthetase low > 90
Dechlorosoma suillum PS 0.33 Dsui_1816 stringent starvation protein B 0.56 Dsui_0695 putative ATPase of the PP-loop superfamily implicated in cell cycle control low > 51
Kangiella aquimarina DSM 16071 0.32 B158DRAFT_2104 Stringent starvation protein B 0.66 B158DRAFT_2154 tRNA s(2)C-32 sulfurtransferase (EC 2.8.1.4) low > 40
Paraburkholderia sabiae LMG 24235 0.31 QEN71_RS27765 ClpXP protease specificity-enhancing factor 0.60 QEN71_RS28595 tRNA 2-thiocytidine(32) synthetase TtcA low > 153

Not shown: 5 genomes with orthologs for HP15_549 only; 23 genomes with orthologs for HP15_2116 only