Conservation of cofitness between Psest_3803 and Psest_2128 in Pseudomonas stutzeri RCH2

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3803 DNA repair protein radc 1.0 Psest_2128 Acyl-CoA dehydrogenases 0.19 17
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_09220 hypothetical protein 0.87 AO353_20380 acyl-CoA dehydrogenase low > 101
Pseudomonas sp. S08-1 0.86 OH686_13620 UPF0758 family protein 0.88 OH686_00885 Acyl-CoA dehydrogenase low > 80
Pseudomonas sp. RS175 0.84 PFR28_04412 hypothetical protein 0.88 PFR28_01265 (R)-benzylsuccinyl-CoA dehydrogenase 0.29 81
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_2126 DNA repair protein RadC 0.88 Pf1N1B4_3993 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) low > 87
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_12545 hypothetical protein 0.88 AO356_01555 acyl-CoA dehydrogenase low > 104
Pseudomonas fluorescens SBW25 0.81 PFLU_RS29445 JAB domain-containing protein 0.87 PFLU_RS18940 acyl-CoA dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.81 PFLU_RS29445 JAB domain-containing protein 0.87 PFLU_RS18940 acyl-CoA dehydrogenase low > 109
Pseudomonas simiae WCS417 0.80 PS417_27770 hypothetical protein 0.87 PS417_16990 acyl-CoA dehydrogenase low > 88
Pseudomonas fluorescens FW300-N2E2 0.80 Pf6N2E2_4377 DNA repair protein RadC 0.88 Pf6N2E2_2186 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) low > 103
Pseudomonas syringae pv. syringae B728a 0.78 Psyr_0222 DNA replication and repair protein RadC 0.85 Psyr_2474 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.78 Psyr_0222 DNA replication and repair protein RadC 0.85 Psyr_2474 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region low > 86
Pseudomonas fluorescens GW456-L13 0.78 PfGW456L13_798 DNA repair protein RadC 0.87 PfGW456L13_2597 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) low > 87
Pseudomonas putida KT2440 0.71 PP_5284 UPF0758 protein PP_5284 0.87 PP_2437 putative Acyl-CoA dehydrogenase low > 96
Ralstonia solanacearum PSI07 0.61 RPSI07_RS12675 JAB domain-containing protein 0.66 RPSI07_RS14530 acyl-CoA dehydrogenase low > 81
Ralstonia solanacearum UW163 0.61 UW163_RS08960 JAB domain-containing protein 0.65 UW163_RS10945 acyl-CoA dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.61 RALBFv3_RS04710 JAB domain-containing protein 0.65 RALBFv3_RS02780 acyl-CoA dehydrogenase low > 76
Ralstonia solanacearum GMI1000 0.61 RS_RS12270 JAB domain-containing protein 0.66 RS_RS10150 acyl-CoA dehydrogenase low > 80
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS00330 DNA repair protein RadC 0.65 ABZR87_RS14705 acyl-CoA dehydrogenase family protein 0.50 17
Marinobacter adhaerens HP15 0.58 HP15_3321 DNA repair protein RadC-like protein 0.64 HP15_3923 acyl-CoA dehydrogenase family protein low > 73
Cupriavidus basilensis FW507-4G11 0.57 RR42_RS16995 hypothetical protein 0.66 RR42_RS05715 acyl-CoA dehydrogenase low > 128
Shewanella loihica PV-4 0.57 Shew_3481 DNA repair protein RadC (RefSeq) 0.63 Shew_2860 acyl-CoA dehydrogenase domain-containing protein (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.54 MIT1002_00049 DNA repair protein RadC 0.58 MIT1002_02317 (R)-benzylsuccinyl-CoA dehydrogenase low > 70
Hydrogenophaga sp. GW460-11-11-14-LB1 0.53 GFF1170 DNA repair protein RadC 0.66 GFF4493 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) low > 90
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS03085 DNA repair protein RadC 0.66 QEN71_RS24040 acyl-CoA dehydrogenase family protein low > 153
Paraburkholderia graminis OAS925 0.49 ABIE53_003289 DNA repair protein RadC 0.67 ABIE53_001614 acyl-CoA dehydrogenase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_04066 DNA replication and repair protein RadC 0.67 H281DRAFT_04591 acyl-CoA dehydrogenase low > 103
Variovorax sp. OAS795 0.49 ABID97_RS07700 DNA repair protein RadC 0.66 ABID97_RS17025 acyl-CoA dehydrogenase family protein low > 91
Variovorax sp. SCN45 0.47 GFF5700 UPF0758 family protein 0.64 GFF365 Acyl-CoA dehydrogenase low > 127
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS15625 hypothetical protein 0.66 BPHYT_RS06740 acyl-CoA dehydrogenase low > 109
Acidovorax sp. GW101-3H11 0.45 Ac3H11_1774 DNA repair protein RadC 0.64 Ac3H11_1051 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) — —
Acinetobacter radioresistens SK82 0.43 MPMX26_02636 hypothetical protein 0.57 MPMX26_01461 (R)-benzylsuccinyl-CoA dehydrogenase — —
Phaeobacter inhibens DSM 17395 0.28 PGA1_c34550 DNA repair protein RadC 0.58 PGA1_c05590 acyl-CoA dehydrogenase-like protein low > 62
Dinoroseobacter shibae DFL-12 0.28 Dshi_3569 DNA repair protein RadC (RefSeq) 0.29 Dshi_1004 acyl-CoA dehydrogenase domain protein (RefSeq) low > 64
Rhodopseudomonas palustris CGA009 0.26 TX73_002000 DNA repair protein RadC 0.60 TX73_017005 acyl-CoA dehydrogenase family protein low > 86
Sphingomonas koreensis DSMZ 15582 0.25 Ga0059261_3175 DNA repair protein radc 0.60 Ga0059261_0847 Acyl-CoA dehydrogenases low > 68

Not shown: 56 genomes with orthologs for Psest_3803 only; 4 genomes with orthologs for Psest_2128 only