| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 1.0 | GFF3835 | | Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) | 1.0 | GFF2032 | | Putrescine transport system permease protein PotI (TC 3.A.1.11.2) | 0.68 | 14 |
| Variovorax sp. SCN45 | 0.75 | GFF2868 | | Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) | 0.23 | GFF5033 | | ABC-type spermidine/putrescine transport system, permease component II | low | > 127 |
| Variovorax sp. OAS795 | 0.74 | ABID97_RS10600 | | D-glycerate dehydrogenase | 0.22 | ABID97_RS04045 | | ABC transporter permease | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.73 | Ac3H11_2599 | | Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) | 0.21 | Ac3H11_1612 | | ABC transporter, permease protein | low | > 79 |
| Ralstonia solanacearum GMI1000 | 0.64 | RS_RS21645 | | D-glycerate dehydrogenase | 0.15 | RS_RS08745 | | ABC transporter permease | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.62 | RPSI07_RS02805 | | D-glycerate dehydrogenase | 0.15 | RPSI07_RS16225 | | ABC transporter permease | low | > 81 |
| Paraburkholderia sabiae LMG 24235 | 0.61 | QEN71_RS04460 | | D-glycerate dehydrogenase | 0.45 | QEN71_RS12960 | | ABC transporter permease subunit | — | — |
| Burkholderia phytofirmans PsJN | 0.61 | BPHYT_RS14520 | | 2-hydroxyacid dehydrogenase | 0.49 | BPHYT_RS23135 | | putrescine/spermidine ABC transporter permease | — | — |
| Ralstonia sp. UNC404CL21Col | 0.61 | ABZR87_RS10055 | | D-glycerate dehydrogenase | 0.20 | ABZR87_RS22470 | | ABC transporter permease | low | > 80 |
| Paraburkholderia graminis OAS925 | 0.60 | ABIE53_003066 | | gluconate 2-dehydrogenase | 0.43 | ABIE53_002367 | | putrescine transport system permease protein | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.60 | H281DRAFT_04333 | | Lactate dehydrogenase | 0.43 | H281DRAFT_05183 | | putrescine transport system permease protein | low | > 103 |
| Herbaspirillum seropedicae SmR1 | 0.60 | HSERO_RS08110 | | 2-hydroxyacid dehydrogenase | 0.18 | HSERO_RS05400 | | polyamine ABC transporter permease | low | > 78 |
| Ralstonia solanacearum UW163 | 0.58 | UW163_RS11805 | | D-glycerate dehydrogenase | 0.15 | UW163_RS14560 | | ABC transporter permease | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.58 | RALBFv3_RS14340 | | D-glycerate dehydrogenase | 0.15 | RALBFv3_RS01250 | | ABC transporter permease | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.56 | Xcc-8004.1956.1 | | Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) | 0.40 | Xcc-8004.2212.1 | | Putrescine transport system permease protein PotI (TC 3.A.1.11.2) | low | > 74 |
| Pseudomonas simiae WCS417 | 0.38 | PS417_12555 | | phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data) | 0.40 | PS417_27105 | | spermidine/putrescine ABC transporter permease | low | > 88 |
| Pseudomonas sp. RS175 | 0.36 | PFR28_01596 | | Glyoxylate/hydroxypyruvate reductase B | 0.41 | PFR28_04291 | | Inner membrane ABC transporter permease protein YdcV | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.36 | Pf6N2E2_5310 | | Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) | 0.39 | Pf6N2E2_4517 | | Putrescine transport system permease protein PotI (TC 3.A.1.11.2) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.36 | AO356_16925 | | bifunctional glyoxylate/hydroxypyruvate reductase B | 0.39 | AO356_13175 | | spermidine/putrescine ABC transporter permease | low | > 104 |
| Pseudomonas fluorescens GW456-L13 | 0.36 | PfGW456L13_2948 | | 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) | 0.39 | PfGW456L13_932 | | Putrescine transport system permease protein PotI (TC 3.A.1.11.2) | low | > 87 |
| Pseudomonas putida KT2440 | 0.36 | PP_3376 | | putative phosphonate dehydrogenase | 0.40 | PP_5177 | | spermidine/putrescine ABC transporter - permease subunit | low | > 96 |
| Pseudomonas syringae pv. syringae B728a | 0.35 | Psyr_1043 | | D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein | 0.39 | Psyr_4861 | | Binding-protein-dependent transport systems inner membrane component | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.35 | Psyr_1043 | | D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein | 0.39 | Psyr_4861 | | Binding-protein-dependent transport systems inner membrane component | low | > 86 |
| Azospirillum sp. SherDot2 | 0.35 | MPMX19_02367 | | Glycerate dehydrogenase | 0.47 | MPMX19_04880 | | Inner membrane ABC transporter permease protein YdcV | low | > 112 |
| Klebsiella michiganensis M5al | 0.34 | BWI76_RS26960 | | bifunctional glyoxylate/hydroxypyruvate reductase B | 0.39 | BWI76_RS09475 | | putrescine ABC transporter permease PotI | low | > 92 |
| Rhizobium sp. OAE497 | 0.34 | ABIE40_RS14685 | | D-glycerate dehydrogenase | 0.40 | ABIE40_RS03280 | | ABC transporter permease subunit | low | > 107 |
| Azospirillum brasilense Sp245 | 0.34 | AZOBR_RS01325 | | 2-hydroxyacid dehydrogenase | 0.46 | AZOBR_RS08830 | | putrescine/spermidine ABC transporter permease | low | > 97 |
| Pantoea sp. MT58 | 0.34 | IAI47_00110 | | glyoxylate/hydroxypyruvate reductase GhrB | 0.43 | IAI47_13030 | | putrescine ABC transporter permease PotI | low | > 76 |
| Enterobacter sp. TBS_079 | 0.34 | MPMX20_00177 | | Glyoxylate/hydroxypyruvate reductase B | 0.41 | MPMX20_01498 | | Inner membrane ABC transporter permease protein YdcV | low | > 85 |
| Dickeya dianthicola ME23 | 0.34 | DZA65_RS00195 | | glyoxylate/hydroxypyruvate reductase GhrB | 0.41 | DZA65_RS09805 | | putrescine ABC transporter permease PotI | low | > 75 |
| Serratia liquefaciens MT49 | 0.33 | IAI46_00085 | | glyoxylate/hydroxypyruvate reductase GhrB | 0.43 | IAI46_08385 | | putrescine ABC transporter permease PotI | low | > 86 |
| Escherichia coli Nissle 1917 | 0.33 | ECOLIN_RS20330 | | glyoxylate/hydroxypyruvate reductase GhrB | 0.40 | ECOLIN_RS04565 | | putrescine ABC transporter permease PotI | — | — |
| Dickeya dianthicola 67-19 | 0.33 | HGI48_RS00175 | | glyoxylate/hydroxypyruvate reductase GhrB | 0.41 | HGI48_RS09495 | | putrescine ABC transporter permease PotI | low | > 71 |
| Escherichia coli ECRC101 | 0.33 | MCAODC_06535 | ghrB | glyoxylate/hydroxypyruvate reductase GhrB | 0.40 | MCAODC_25160 | potI | putrescine ABC transporter permease PotI | — | — |
| Escherichia coli ECRC62 | 0.33 | BNILDI_03580 | ghrB | glyoxylate/hydroxypyruvate reductase GhrB | 0.40 | BNILDI_20570 | potH | putrescine ABC transporter permease PotH | — | — |
| Escherichia coli BL21 | 0.33 | ECD_03403 | | glyoxylate/hydroxypyruvate reductase B | 0.39 | ECD_00862 | | putrescine ABC transporter permease | low | > 60 |
| Escherichia coli ECRC98 | 0.33 | JDDGAC_19650 | ghrB | glyoxylate/hydroxypyruvate reductase GhrB | 0.40 | JDDGAC_09580 | potI | putrescine ABC transporter permease PotI | — | — |
| Escherichia coli ECRC101 | 0.33 | OKFHMN_16020 | ghrB | glyoxylate/hydroxypyruvate reductase GhrB | 0.40 | OKFHMN_05945 | potI | putrescine ABC transporter permease PotI | — | — |
| Escherichia coli ECOR27 | 0.33 | NOLOHH_07965 | ghrB | glyoxylate/hydroxypyruvate reductase GhrB | 0.40 | NOLOHH_22315 | potI | putrescine ABC transporter permease PotI | low | > 57 |
| Escherichia coli ECRC99 | 0.33 | KEDOAH_12130 | ghrB | glyoxylate/hydroxypyruvate reductase GhrB | 0.40 | KEDOAH_21965 | potI | putrescine ABC transporter permease PotI | — | — |
| Escherichia coli ECRC102 | 0.33 | NIAGMN_13780 | ghrB | glyoxylate/hydroxypyruvate reductase GhrB | 0.40 | NIAGMN_03990 | potI | putrescine ABC transporter permease PotI | — | — |
| Escherichia fergusonii Becca | 0.33 | EFB2_00254 | | Glyoxylate/hydroxypyruvate reductase B | 0.40 | EFB2_03204 | | Inner membrane ABC transporter permease protein YdcV | low | > 86 |
| Agrobacterium fabrum C58 | 0.33 | Atu0077 | | D-isomer specific 2-hydroxyacid dehydrogenases family protein | 0.39 | Atu0612 | | ABC transporter, membrane spanning protein | low | > 89 |
| Escherichia coli ECOR38 | 0.33 | HEPCGN_14910 | ghrB | glyoxylate/hydroxypyruvate reductase GhrB | 0.39 | HEPCGN_02085 | potI | putrescine ABC transporter permease PotI | 0.59 | 78 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.33 | OHPLBJKB_00153 | | Glyoxylate/hydroxypyruvate reductase B | 0.39 | OHPLBJKB_02811 | | Inner membrane ABC transporter permease protein YdcV | low | > 73 |
| Escherichia coli BW25113 | 0.33 | b3553 | yiaE | putative dehydrogenase (VIMSS) | 0.40 | b0857 | potI | putrescine transporter subunit: membrane component of ABC superfamily (NCBI) | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.32 | HER17_RS21175 | | glyoxylate/hydroxypyruvate reductase GhrB | 0.41 | HER17_RS12485 | | putrescine ABC transporter permease PotI | low | > 75 |
| Rhodospirillum rubrum S1H | 0.32 | Rru_A1815 | | Glycolate reductase (NCBI) | 0.46 | Rru_A1015 | | Binding-protein-dependent transport systems inner membrane component (NCBI) | low | > 58 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.32 | GFF458 | | 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) | 0.42 | GFF761 | | Putrescine transport system permease protein PotI (TC 3.A.1.11.2) | low | > 78 |
| Enterobacter asburiae PDN3 | 0.31 | EX28DRAFT_3817 | | Lactate dehydrogenase and related dehydrogenases | 0.41 | EX28DRAFT_2096 | | ABC-type spermidine/putrescine transport system, permease component II | low | > 76 |
| Castellaniella sp019104865 MT123 | 0.31 | ABCV34_RS08615 | | D-glycerate dehydrogenase | 0.41 | ABCV34_RS02375 | | ABC transporter permease subunit | low | > 48 |
| Rahnella sp. WP5 | 0.31 | EX31_RS05925 | | glyoxylate/hydroxypyruvate reductase GhrB | 0.42 | EX31_RS09615 | | putrescine ABC transporter permease PotI | low | > 89 |
| Dickeya dadantii 3937 | 0.31 | DDA3937_RS21080 | | glyoxylate/hydroxypyruvate reductase GhrB | 0.42 | DDA3937_RS09475 | | putrescine ABC transporter permease PotI | low | > 74 |
| Vibrio cholerae E7946 ATCC 55056 | 0.22 | CSW01_12695 | | lactate dehydrogenase | 0.25 | CSW01_07150 | | spermidine/putrescine ABC transporter permease PotC | low | > 62 |
Not shown: 8 genomes with orthologs for GFF3835 only; 26 genomes with orthologs for GFF2032 only