Conservation of cofitness between GFF4305 and GFF1901 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4305 tRNA-guanine transglycosylase (EC 2.4.2.29) 1.0 GFF1901 Phosphate acetyltransferase (EC 2.3.1.8) 0.80 19
Enterobacter sp. TBS_079 0.99 MPMX20_00997 Queuine tRNA-ribosyltransferase 0.97 MPMX20_03227 Phosphate acetyltransferase low > 85
Enterobacter asburiae PDN3 0.99 EX28DRAFT_2565 tRNA-guanine transglycosylase 0.97 EX28DRAFT_0312 phosphate acetyltransferase low > 76
Klebsiella michiganensis M5al 0.99 BWI76_RS06300 tRNA guanosine(34) transglycosylase Tgt 0.97 BWI76_RS20240 phosphate acetyltransferase — —
Escherichia coli BW25113 0.98 b0406 tgt queuine tRNA-ribosyltransferase (NCBI) 0.97 b2297 pta phosphate acetyltransferase (NCBI) low > 76
Escherichia coli ECOR27 0.98 NOLOHH_01440 tgt tRNA guanosine(34) transglycosylase Tgt 0.97 NOLOHH_14410 pta phosphate acetyltransferase — —
Escherichia coli Nissle 1917 0.98 ECOLIN_RS02445 tRNA guanosine(34) transglycosylase Tgt 0.96 ECOLIN_RS13335 phosphate acetyltransferase — —
Escherichia coli ECOR38 0.98 HEPCGN_07145 tgt tRNA guanosine(34) transglycosylase Tgt 0.96 HEPCGN_21995 pta phosphate acetyltransferase low > 87
Escherichia coli ECRC99 0.98 KEDOAH_19460 tgt tRNA guanosine(34) transglycosylase Tgt 0.97 KEDOAH_05405 pta phosphate acetyltransferase — —
Escherichia coli ECRC62 0.98 BNILDI_22855 tgt tRNA guanosine(34) transglycosylase Tgt 0.97 BNILDI_13330 pta phosphate acetyltransferase low > 75
Escherichia fergusonii Becca 0.98 EFB2_03651 Queuine tRNA-ribosyltransferase 0.96 EFB2_01561 Phosphate acetyltransferase low > 86
Escherichia coli ECRC101 0.98 MCAODC_27730 tgt tRNA guanosine(34) transglycosylase Tgt 0.97 MCAODC_13830 pta phosphate acetyltransferase — —
Escherichia coli BL21 0.98 ECD_00354 tRNA-guanine transglycosylase 0.97 ECD_02222 phosphate acetyltransferase — —
Escherichia coli ECRC98 0.98 JDDGAC_12160 tgt tRNA guanosine(34) transglycosylase Tgt 0.97 JDDGAC_26755 pta phosphate acetyltransferase — —
Escherichia coli ECRC102 0.98 NIAGMN_06560 tgt tRNA guanosine(34) transglycosylase Tgt 0.97 NIAGMN_20560 pta phosphate acetyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.98 OHPLBJKB_03270 Queuine tRNA-ribosyltransferase 0.97 OHPLBJKB_01408 Phosphate acetyltransferase — —
Escherichia coli ECRC100 0.98 OKFHMN_08505 tgt tRNA guanosine(34) transglycosylase Tgt 0.97 OKFHMN_22790 pta phosphate acetyltransferase — —
Pantoea sp. MT58 0.95 IAI47_14805 tRNA guanosine(34) transglycosylase Tgt 0.88 IAI47_06320 phosphate acetyltransferase low > 76
Dickeya dadantii 3937 0.93 DDA3937_RS05470 tRNA guanosine(34) transglycosylase Tgt 0.88 DDA3937_RS14385 phosphate acetyltransferase low > 74
Pectobacterium carotovorum WPP14 0.92 HER17_RS15990 tRNA guanosine(34) transglycosylase Tgt 0.89 HER17_RS07080 phosphate acetyltransferase low > 75
Dickeya dianthicola ME23 0.92 DZA65_RS05855 tRNA guanosine(34) transglycosylase Tgt 0.87 DZA65_RS15285 phosphate acetyltransferase 0.60 46
Dickeya dianthicola 67-19 0.92 HGI48_RS05530 tRNA guanosine(34) transglycosylase Tgt 0.87 HGI48_RS14355 phosphate acetyltransferase low > 71
Rahnella sp. WP5 0.92 EX31_RS22095 tRNA guanosine(34) transglycosylase Tgt 0.89 EX31_RS19485 phosphate acetyltransferase low > 89
Erwinia tracheiphila SCR3 0.92 LU632_RS18500 tgt tRNA guanosine(34) transglycosylase Tgt 0.88 LU632_RS07920 pta phosphate acetyltransferase — —
Serratia liquefaciens MT49 0.92 IAI46_04840 tRNA guanosine(34) transglycosylase Tgt 0.88 IAI46_17755 phosphate acetyltransferase low > 86
Shewanella loihica PV-4 0.86 Shew_2337 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.69 Shew_2394 phosphate acetyltransferase (RefSeq) low > 60
Shewanella sp. ANA-3 0.85 Shewana3_1435 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.68 Shewana3_1551 phosphate acetyltransferase (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.85 CSW01_03850 tRNA guanosine(34) transglycosylase Tgt 0.76 CSW01_05575 phosphate acetyltransferase low > 62
Shewanella oneidensis MR-1 0.85 SO3113 tgt queuine tRNA-ribosyltransferase (NCBI ptt file) 0.68 SO2916 pta phosphate acetyltransferase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.85 Sama_2193 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.69 Sama_1494 phosphate acetyltransferase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.77 MIT1002_02813 Queuine tRNA-ribosyltransferase 0.60 MIT1002_01474 Phosphate acetyltransferase low > 70
Pseudomonas sp. S08-1 0.75 OH686_17430 tRNA-guanine transglycosylase 0.53 OH686_06270 phosphate acetyltransferase low > 80
Pseudomonas stutzeri RCH2 0.73 Psest_1242 tRNA-guanine transglycosylase, queuosine-34-forming 0.50 Psest_3214 phosphate acetyltransferase low > 67
Pseudomonas sp. RS175 0.73 PFR28_00277 Queuine tRNA-ribosyltransferase 0.50 PFR28_00196 Phosphate acetyltransferase low > 88
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_15790 queuine tRNA-ribosyltransferase 0.50 AO353_05065 phosphate acetyltransferase — —
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_4882 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.50 PfGW456L13_4990 Phosphate acetyltransferase (EC 2.3.1.8) low > 87
Marinobacter adhaerens HP15 0.72 HP15_1479 queuine tRNA-ribosyltransferase 0.50 HP15_1498 phosphate acetyltransferase low > 73
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_1228 tRNA-guanine transglycosylase 0.50 Psyr_1007 phosphotransacetylase — —
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_3198 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.50 Pf6N2E2_5260 Phosphate acetyltransferase (EC 2.3.1.8) low > 103
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_06690 queuine tRNA-ribosyltransferase 0.50 AO356_16680 phosphate acetyltransferase low > 104
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_1228 tRNA-guanine transglycosylase 0.50 Psyr_1007 phosphotransacetylase — —
Pseudomonas putida KT2440 0.72 PP_0833 queuine tRNA-ribosyltransferase 0.48 PP_0774 Phosphate acetyltransferase low > 96
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS24900 tRNA guanosine(34) transglycosylase Tgt 0.50 PFLU_RS03780 phosphate acetyltransferase low > 109
Pseudomonas simiae WCS417 0.72 PS417_23245 queuine tRNA-ribosyltransferase 0.50 PS417_03730 phosphate acetyltransferase — —
Pseudomonas fluorescens SBW25 0.72 PFLU_RS24900 tRNA guanosine(34) transglycosylase Tgt 0.50 PFLU_RS03780 phosphate acetyltransferase low > 109
Acinetobacter radioresistens SK82 0.68 MPMX26_00438 Queuine tRNA-ribosyltransferase 0.46 MPMX26_00414 Phosphate acetyltransferase low > 36
Rhodospirillum rubrum S1H 0.55 Rru_A0280 Queuine tRNA-ribosyltransferase (NCBI) 0.46 Rru_A2997 Phosphate acetyltransferase (NCBI) low > 58
Desulfovibrio vulgaris Miyazaki F 0.51 DvMF_2757 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.30 DvMF_1864 phosphate acetyltransferase (RefSeq) — —
Desulfovibrio vulgaris Hildenborough JW710 0.51 DVU0726 tgt queuine tRNA-ribosyltransferase (TIGR) 0.30 DVU3029 pta phosphate acetyltransferase (TIGR) — —
Pedobacter sp. GW460-11-11-14-LB5 0.46 CA265_RS13030 tRNA guanosine(34) transglycosylase Tgt 0.29 CA265_RS10075 phosphate acetyltransferase low > 88

Not shown: 50 genomes with orthologs for GFF4305 only; 1 genomes with orthologs for GFF1901 only