| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_2632 | | ribosomal protein S12 methylthiotransferase RimO | 1.0 | Psest_1937 | | ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components | 0.22 | 19 |
| Pseudomonas sp. S08-1 | 0.89 | OH686_18875 | | ribosomal protein S12 methylthiotransferase RimO | 0.73 | OH686_03985 | | Nitrate ABC transporter, substrate-binding protein | low | > 80 |
| Pseudomonas putida KT2440 | 0.87 | PP_1197 | | ribosomal protein S12 methylthiotransferase | 0.70 | PP_2094 | | putative Nitrate-binding protein NasS | low | > 96 |
| Pseudomonas sp. RS175 | 0.85 | PFR28_00486 | | Ribosomal protein S12 methylthiotransferase RimO | 0.70 | PFR28_01053 | | Nitrate/nitrite binding protein NrtA | low | > 88 |
| Pseudomonas simiae WCS417 | 0.85 | PS417_05880 | | ribosomal protein S12 methylthiotransferase | 0.73 | PS417_20960 | | Nitrate-binding regulatory protein (nasS) (from data) | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.85 | AO353_16875 | | ribosomal protein S12 methylthiotransferase RimO | 0.72 | AO353_00785 | | nitrate transporter | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.84 | PfGW456L13_4653 | | Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase | 0.72 | PfGW456L13_4097 | | Nitrate ABC transporter, nitrate-binding protein | low | > 87 |
| Pseudomonas fluorescens SBW25-INTG | 0.84 | PFLU_RS05950 | | 30S ribosomal protein S12 methylthiotransferase RimO | 0.73 | PFLU_RS22570 | | ABC transporter substrate-binding protein | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.84 | PFLU_RS05950 | | 30S ribosomal protein S12 methylthiotransferase RimO | 0.73 | PFLU_RS22570 | | ABC transporter substrate-binding protein | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.84 | Pf1N1B4_3160 | | Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase | 0.71 | Pf1N1B4_3841 | | Nitrate ABC transporter, nitrate-binding protein | low | > 87 |
| Pseudomonas syringae pv. syringae B728a | 0.83 | Psyr_1392 | | SSU ribosomal protein S12P methylthiotransferase | 0.68 | Psyr_2105 | | conserved hypothetical protein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.83 | Psyr_1392 | | SSU ribosomal protein S12P methylthiotransferase | 0.68 | Psyr_2105 | | conserved hypothetical protein | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.83 | AO356_05600 | | ribosomal protein S12 methylthiotransferase RimO | 0.70 | AO356_02750 | | nitrate transporter | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.83 | Pf6N2E2_2978 | | Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase | 0.72 | Pf6N2E2_2374 | | Nitrate ABC transporter, nitrate-binding protein | low | > 103 |
| Enterobacter asburiae PDN3 | 0.73 | EX28DRAFT_2131 | | ribosomal protein S12 methylthiotransferase RimO | 0.52 | EX28DRAFT_0842 | | ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components | 0.44 | 50 |
| Klebsiella michiganensis M5al | 0.73 | BWI76_RS09115 | | 30S ribosomal protein S12 methylthiotransferase RimO | 0.53 | BWI76_RS17380 | | nitrate transporter component | low | > 92 |
| Enterobacter sp. TBS_079 | 0.72 | MPMX20_01473 | | Ribosomal protein S12 methylthiotransferase RimO | 0.52 | MPMX20_02624 | | Nitrate/nitrite binding protein NrtA | low | > 85 |
| Azospirillum sp. SherDot2 | 0.72 | MPMX19_05761 | | Ribosomal protein S12 methylthiotransferase RimO | 0.25 | MPMX19_05925 | | Nitrate/nitrite binding protein NrtA | low | > 112 |
| Azospirillum brasilense Sp245 | 0.72 | AZOBR_RS14980 | | ribosomal protein S12 methylthiotransferase | 0.25 | AZOBR_RS18560 | | ABC transporter for nitrate, periplasmic substrate-binding component (from data) | low | > 97 |
| Dickeya dianthicola 67-19 | 0.72 | HGI48_RS09400 | | 30S ribosomal protein S12 methylthiotransferase RimO | 0.54 | HGI48_RS14105 | | ABC transporter substrate-binding protein | low | > 71 |
| Dickeya dianthicola ME23 | 0.72 | DZA65_RS09710 | | 30S ribosomal protein S12 methylthiotransferase RimO | 0.53 | DZA65_RS14765 | | ABC transporter substrate-binding protein | low | > 75 |
| Dickeya dadantii 3937 | 0.71 | DDA3937_RS09385 | | 30S ribosomal protein S12 methylthiotransferase RimO | 0.54 | DDA3937_RS14105 | | ABC transporter substrate-binding protein | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.71 | HER17_RS12755 | | 30S ribosomal protein S12 methylthiotransferase RimO | 0.56 | HER17_RS07315 | | ABC transporter substrate-binding protein | low | > 75 |
| Acinetobacter radioresistens SK82 | 0.70 | MPMX26_01294 | | Ribosomal protein S12 methylthiotransferase RimO | 0.16 | MPMX26_01577 | | Bicarbonate transport ATP-binding protein CmpC | — | — |
| Ralstonia sp. UNC404CL21Col | 0.67 | ABZR87_RS13275 | | 30S ribosomal protein S12 methylthiotransferase RimO | 0.58 | ABZR87_RS06900 | | CmpA/NrtA family ABC transporter substrate-binding protein | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.67 | RS_RS08245 | | 30S ribosomal protein S12 methylthiotransferase RimO | 0.59 | RS_RS01875 | | nitrate ABC transporter substrate-binding protein | low | > 80 |
| Dechlorosoma suillum PS | 0.67 | Dsui_2540 | | ribosomal protein S12 methylthiotransferase RimO | 0.57 | Dsui_1831 | | ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component | low | > 51 |
| Ralstonia solanacearum PSI07 | 0.67 | RPSI07_RS16010 | | 30S ribosomal protein S12 methylthiotransferase RimO | 0.59 | RPSI07_RS22270 | | nitrate ABC transporter substrate-binding protein | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.67 | RALBFv3_RS01480 | | 30S ribosomal protein S12 methylthiotransferase RimO | 0.59 | RALBFv3_RS11035 | | nitrate ABC transporter substrate-binding protein | low | > 76 |
| Magnetospirillum magneticum AMB-1 | 0.67 | AMB_RS15345 | | 30S ribosomal protein S12 methylthiotransferase RimO | 0.26 | AMB_RS02765 | | nitrate ABC transporter substrate-binding protein | — | — |
| Ralstonia solanacearum UW163 | 0.67 | UW163_RS14790 | | 30S ribosomal protein S12 methylthiotransferase RimO | 0.59 | UW163_RS02545 | | nitrate ABC transporter substrate-binding protein | — | — |
| Alteromonas macleodii MIT1002 | 0.66 | MIT1002_01933 | | Ribosomal protein S12 methylthiotransferase RimO | 0.27 | MIT1002_00709 | | Nitrate transport protein NrtA precursor | low | > 70 |
| Cupriavidus basilensis FW507-4G11 | 0.66 | RR42_RS07640 | | ribosomal protein S12 methylthiotransferase | 0.58 | RR42_RS01955 | | nitrate transporter | low | > 128 |
| Burkholderia phytofirmans PsJN | 0.65 | BPHYT_RS09170 | | ribosomal protein S12 methylthiotransferase RimO | 0.39 | BPHYT_RS28170 | | nitrate ABC transporter substrate-binding protein | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.64 | QEN71_RS22185 | | 30S ribosomal protein S12 methylthiotransferase RimO | 0.39 | QEN71_RS12555 | | CmpA/NrtA family ABC transporter substrate-binding protein | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.64 | H281DRAFT_00855 | | SSU ribosomal protein S12P methylthiotransferase | 0.41 | H281DRAFT_01219 | | nitrate/nitrite transport system substrate-binding protein | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.64 | ABIE53_002068 | | ribosomal protein S12 methylthiotransferase | 0.42 | ABIE53_005718 | | ABC-type nitrate/sulfonate/bicarbonate transport system substrate-binding protein | low | > 113 |
| Dinoroseobacter shibae DFL-12 | 0.63 | Dshi_2618 | | MiaB-like tRNA modifying enzyme YliG (RefSeq) | 0.25 | Dshi_1663 | | nitrate transporter substrate-binding (RefSeq) | low | > 64 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.62 | GFF4923 | | Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase | 0.54 | GFF3671 | | Nitrate ABC transporter, nitrate-binding protein | low | > 90 |
| Herbaspirillum seropedicae SmR1 | 0.62 | HSERO_RS15005 | | ribosomal protein S12 methylthiotransferase | 0.56 | HSERO_RS06055 | | nitrate transporter | low | > 78 |
| Acidovorax sp. GW101-3H11 | 0.61 | Ac3H11_364 | | Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase | 0.54 | Ac3H11_3220 | | Nitrate ABC transporter, nitrate-binding protein | low | > 79 |
| Variovorax sp. SCN45 | 0.61 | GFF400 | | Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4) | 0.55 | GFF4737 | | Nitrate ABC transporter, substrate-binding protein | low | > 127 |
| Variovorax sp. OAS795 | 0.60 | ABID97_RS17220 | | 30S ribosomal protein S12 methylthiotransferase RimO | 0.54 | ABID97_RS20560 | | CmpA/NrtA family ABC transporter substrate-binding protein | low | > 91 |
Not shown: 45 genomes with orthologs for Psest_2632 only; 3 genomes with orthologs for Psest_1937 only