Conservation of cofitness between PGA1_c11040 and PGA1_c17060 in Phaeobacter inhibens DSM 17395

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Phaeobacter inhibens DSM 17395 1.0 PGA1_c11040 dnaK suppressor protein DksA 1.0 PGA1_c17060 putative glutamate racemase 0.34 11
Dinoroseobacter shibae DFL-12 0.81 Dshi_1884 transcriptional regulator, TraR/DksA family (RefSeq) 0.81 Dshi_1760 glutamate racemase (RefSeq) — —
Magnetospirillum magneticum AMB-1 0.63 AMB_RS19350 RNA polymerase-binding protein DksA 0.20 AMB_RS17835 glutamate racemase — —
Azospirillum brasilense Sp245 0.62 AZOBR_RS11245 molecular chaperone DnaK 0.39 AZOBR_RS08075 glutamate racemase — —
Azospirillum sp. SherDot2 0.60 MPMX19_01492 RNA polymerase-binding transcription factor DksA 0.34 MPMX19_01787 Glutamate racemase — —
Agrobacterium fabrum C58 0.59 Atu1359 dnaK deletion suppressor protein 0.11 Atu1867 glutamate racemase low > 89
Caulobacter crescentus NA1000 Δfur 0.59 CCNA_02663 DnaK suppressor protein DksA 0.35 CCNA_03817 glutamate racemase — —
Caulobacter crescentus NA1000 0.59 CCNA_02663 DnaK suppressor protein DksA 0.35 CCNA_03817 glutamate racemase low > 66
Brevundimonas sp. GW460-12-10-14-LB2 0.56 A4249_RS08530 RNA polymerase-binding protein DksA 0.34 A4249_RS12530 aspartate/glutamate racemase family protein — —
Ralstonia solanacearum UW163 0.41 UW163_RS03935 RNA polymerase-binding protein DksA 0.19 UW163_RS11260 glutamate racemase — —
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS09645 RNA polymerase-binding protein DksA 0.19 RALBFv3_RS02465 glutamate racemase low > 76
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS01640 molecular chaperone DnaK 0.18 BPHYT_RS06975 glutamate racemase — —
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_02205 transcriptional regulator, TraR/DksA family 0.19 H281DRAFT_04958 glutamate racemase low > 103
Dechlorosoma suillum PS 0.40 Dsui_2717 RNA polymerase-binding protein DksA 0.18 Dsui_1998 glutamate racemase — —
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS00840 molecular chaperone DnaK 0.14 HSERO_RS07755 glutamate racemase — —
Cupriavidus basilensis FW507-4G11 0.39 RR42_RS01030 molecular chaperone DnaK 0.17 RR42_RS13910 glutamate racemase — —
Pseudomonas stutzeri RCH2 0.38 Psest_1003 RNA polymerase-binding protein DksA 0.21 Psest_1116 glutamate racemase — —
Kangiella aquimarina DSM 16071 0.38 B158DRAFT_0056 transcriptional regulator, TraR/DksA family 0.18 B158DRAFT_0228 glutamate racemase (EC 5.1.1.3) — —
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_14420 molecular chaperone DnaK 0.18 AO353_14800 glutamate racemase — —
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_2862 C4-type zinc finger protein, DksA/TraR family 0.18 Pf1N1B4_2922 Glutamate racemase (EC 5.1.1.3) — —
Pseudomonas sp. RS175 0.37 PFR28_03714 RNA polymerase-binding transcription factor DksA 0.16 PFR28_03652 Glutamate racemase 2 — —
Pseudomonas fluorescens SBW25 0.36 PFLU_RS25715 RNA polymerase-binding protein DksA 0.17 PFLU_RS03670 glutamate racemase — —
Pseudomonas putida KT2440 0.36 PP_4693 RNA polymerase-binding transcription factor DksA 0.18 PP_0736 Glutamate racemase — —
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS25715 RNA polymerase-binding protein DksA 0.17 PFLU_RS03670 glutamate racemase — —
Pseudomonas sp. S08-1 0.36 OH686_17280 RNA polymerase-binding protein DksA 0.19 OH686_07895 glutamate racemase — —
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_16095 molecular chaperone DnaK 0.17 AO356_16510 glutamate racemase — —
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_1528 C4-type zinc finger protein, DksA/TraR family 0.18 PfGW456L13_1585 Glutamate racemase (EC 5.1.1.3) — —
Pseudomonas simiae WCS417 0.35 PS417_23875 molecular chaperone DnaK 0.17 PS417_03620 glutamate racemase — —
Dickeya dadantii 3937 0.35 DDA3937_RS15935 RNA polymerase-binding protein DksA 0.14 DDA3937_RS01000 glutamate racemase — —
Pantoea sp. MT58 0.35 IAI47_15635 RNA polymerase-binding protein DksA 0.16 IAI47_00960 glutamate racemase — —
Dickeya dianthicola ME23 0.34 DZA65_RS17135 RNA polymerase-binding protein DksA 0.14 DZA65_RS21420 glutamate racemase — —
Dickeya dianthicola 67-19 0.34 HGI48_RS16050 RNA polymerase-binding protein DksA 0.14 HGI48_RS20375 glutamate racemase low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF87 C4-type zinc finger protein, DksA/TraR family 0.14 GFF2353 Glutamate racemase (EC 5.1.1.3) — —
Shewanella amazonensis SB2B 0.33 Sama_0780 TraR/DksA family transcriptional regulator (RefSeq) 0.15 Sama_0194 glutamate racemase (RefSeq) — —
Shewanella loihica PV-4 0.33 Shew_3129 TraR/DksA family transcriptional regulator (RefSeq) 0.17 Shew_0139 glutamate racemase (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.32 CSW01_03155 RNA polymerase-binding transcription factor DksA 0.18 CSW01_00800 glutamate racemase — —
Desulfovibrio vulgaris Hildenborough JW710 0.31 DVU2150 dksA dnaK suppressor protein, putative (TIGR) 0.21 DVU0768 murI glutamate racemase (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.31 DvMF_0008 transcriptional regulator, TraR/DksA family (RefSeq) 0.20 DvMF_2810 glutamate racemase (RefSeq) — —

Not shown: 39 genomes with orthologs for PGA1_c11040 only; 16 genomes with orthologs for PGA1_c17060 only