Conservation of cofitness between GFF1414 and GFF1333 in Hydrogenophaga sp. GW460-11-11-14-LB1

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF1414 Flagellar basal-body rod protein FlgC 1.0 GFF1333 Type IV pilus biogenesis protein PilQ 0.52 13
Acidovorax sp. GW101-3H11 0.83 Ac3H11_1376 Flagellar basal-body rod protein FlgC 0.63 Ac3H11_4703 Type IV pilus biogenesis protein PilQ low > 79
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS10185 flagellar basal body rod protein FlgC 0.40 HSERO_RS20915 secretin low > 78
Dechlorosoma suillum PS 0.62 Dsui_1733 flagellar basal-body rod protein FlgC 0.44 Dsui_1191 type IV pilus secretin PilQ/competence protein low > 51
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS35720 flagellar basal body rod protein FlgC 0.51 RR42_RS19015 secretin low > 128
Variovorax sp. SCN45 0.58 GFF5716 Flagellar basal-body rod protein FlgC 0.64 GFF5323 Type IV pilus biogenesis protein PilQ low > 127
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS22285 flagellar basal body rod protein FlgC 0.52 ABZR87_RS02600 temperature dependent type IV pilus secretin PilQ low > 80
Shewanella amazonensis SB2B 0.53 Sama_2317 flgC flagellar basal body rod protein FlgC (RefSeq) 0.33 Sama_3369 type IV pilus biogenesis protein PilQ (RefSeq) low > 62
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS21735 flagellar basal body rod protein FlgC 0.53 RALBFv3_RS06945 type IV pilus secretin PilQ low > 76
Ralstonia solanacearum UW163 0.53 UW163_RS17450 flagellar basal body rod protein FlgC 0.53 UW163_RS06670 type IV pilus secretin PilQ — —
Ralstonia solanacearum PSI07 0.53 RPSI07_RS01395 flagellar basal body rod protein FlgC 0.52 RPSI07_RS10290 type IV pilus secretin PilQ low > 81
Ralstonia solanacearum GMI1000 0.53 RS_RS18800 flagellar basal body rod protein FlgC 0.52 RS_RS14890 type IV pilus secretin PilQ low > 80
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_02655 flgC flagellar basal body rod protein FlgC 0.32 OKGIIK_12040 pilQ type IV pilus secretin PilQ low > 52
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS20080 flagellar basal body rod protein FlgC 0.32 ABZR86_RS11790 type IV pilus secretin PilQ low > 74
Rhodanobacter denitrificans FW104-10B01 0.51 LRK54_RS13410 flagellar basal body rod protein FlgC 0.31 LRK54_RS11855 type IV pilus secretin PilQ low > 59
Rhodanobacter denitrificans MT42 0.51 LRK55_RS13150 flagellar basal body rod protein FlgC 0.31 LRK55_RS11580 type IV pilus secretin PilQ 0.63 22
Pseudomonas syringae pv. syringae B728a ΔmexB 0.51 Psyr_3480 Flagellar basal-body rod protein FlgC 0.38 Psyr_0407 type II and III secretion system protein:NolW-like protein:NolW-like protein low > 86
Pseudomonas syringae pv. syringae B728a 0.51 Psyr_3480 Flagellar basal-body rod protein FlgC 0.38 Psyr_0407 type II and III secretion system protein:NolW-like protein:NolW-like protein low > 86
Shewanella loihica PV-4 0.50 Shew_1346 flgC flagellar basal body rod protein FlgC (RefSeq) 0.31 Shew_0212 type IV pilus secretin PilQ (RefSeq) — —
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_5695 Flagellar basal-body rod protein FlgC 0.38 Pf6N2E2_3756 Type IV pilus biogenesis protein PilQ low > 103
Pseudomonas sp. RS175 0.49 PFR28_03253 Flagellar basal-body rod protein FlgC 0.39 PFR28_05011 Type 3 secretion system secretin low > 88
Shewanella sp. ANA-3 0.49 Shewana3_1322 flgC flagellar basal body rod protein FlgC (RefSeq) 0.31 Shewana3_3895 type IV pilus secretin PilQ (RefSeq) low > 73
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_18920 flagellar basal-body rod protein FlgC 0.38 AO356_09395 fimbrial protein low > 104
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_02855 flagellar basal-body rod protein FlgC 0.39 AO353_12495 fimbrial protein low > 101
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_2002 Flagellar basal-body rod protein FlgC 0.39 PfGW456L13_277 Type IV pilus biogenesis protein PilQ low > 87
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_3473 Flagellar basal-body rod protein FlgC 0.38 Pf1N1B4_1539 Type IV pilus biogenesis protein PilQ low > 87
Shewanella oneidensis MR-1 0.48 SO3249 flgC flagellar basal-body rod protein FlgC (NCBI ptt file) 0.32 SO0285 type IV pilus biogenesis protein PilQ (NCBI ptt file) low > 76
Marinobacter adhaerens HP15 0.47 HP15_1468 flagellar basal-body rod protein FlgC-like protein 0.35 HP15_478 type 4 fimbrial biogenesis protein PilQ low > 73
Pseudomonas sp. S08-1 0.46 OH686_02970 flagellar basal-body rod protein FlgC 0.38 OH686_10025 Type IV pilus biogenesis protein PilQ low > 80
Pseudomonas stutzeri RCH2 0.44 Psest_2967 flagellar basal-body rod protein FlgC 0.37 Psest_3715 type IV pilus secretin (or competence protein) PilQ 0.21 41

Not shown: 53 genomes with orthologs for GFF1414 only; 3 genomes with orthologs for GFF1333 only